RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 GCNT4Q9P109 453 aa16.57■□□□□ 0.24
PDGFB-202ENST00000381551 FNIP2Q9P278 1114 aa16.57■□□□□ 0.24
PDGFB-202ENST00000381551 MTCH2Q9Y6C9 303 aa16.57■□□□□ 0.24
PDGFB-202ENST00000381551 MYO7AQ13402 2215 aa16.56■□□□□ 0.24
PDGFB-202ENST00000381551 H7C4K7 107 aa16.56■□□□□ 0.24
PDGFB-202ENST00000381551 TEX33O43247 280 aa16.56■□□□□ 0.24
PDGFB-202ENST00000381551 CLSTN1O94985 981 aa16.56■□□□□ 0.24
PDGFB-202ENST00000381551 CSPG5O95196 566 aa16.56■□□□□ 0.24
PDGFB-202ENST00000381551 CNPP09543 421 aaKnown RBP16.56■□□□□ 0.24
PDGFB-202ENST00000381551 WEE2P0C1S8 567 aa16.56■□□□□ 0.24
PDGFB-202ENST00000381551 WARSP23381 471 aaKnown RBP16.56■□□□□ 0.24
PDGFB-202ENST00000381551 GNL1P36915 607 aaPredicted RBP16.56■□□□□ 0.24
PDGFB-202ENST00000381551 PSMD5Q16401 504 aa16.56■□□□□ 0.24
PDGFB-202ENST00000381551 FILIP1LQ4L180 1135 aa16.56■□□□□ 0.24
PDGFB-202ENST00000381551 FKBP15Q5T1M5 1219 aa16.56■□□□□ 0.24
PDGFB-202ENST00000381551 RSPO2Q6UXX9 243 aaPredicted RBP16.56■□□□□ 0.24
PDGFB-202ENST00000381551 OSTM1Q86WC4 334 aa16.56■□□□□ 0.24
PDGFB-202ENST00000381551 THEM5Q8N1Q8 247 aa16.56■□□□□ 0.24
PDGFB-202ENST00000381551 GUCD1Q96NT3 240 aa16.56■□□□□ 0.24
PDGFB-202ENST00000381551 NT5C1BQ96P26 610 aa16.56■□□□□ 0.24
PDGFB-202ENST00000381551 KLHL5Q96PQ7 755 aa16.56■□□□□ 0.24
PDGFB-202ENST00000381551 RTP3Q9BQQ7 232 aa16.56■□□□□ 0.24
PDGFB-202ENST00000381551 OXCT2Q9BYC2 517 aaPredicted RBP16.56■□□□□ 0.24
PDGFB-202ENST00000381551 SMYD3Q9H7B4 428 aa16.56■□□□□ 0.24
PDGFB-202ENST00000381551 CYP3A43Q9HB55 503 aa16.56■□□□□ 0.24
PDGFB-202ENST00000381551 MTMR10Q9NXD2 777 aa16.56■□□□□ 0.24
PDGFB-202ENST00000381551 MTRRQ9UBK8 725 aa16.56■□□□□ 0.24
PDGFB-202ENST00000381551 FBXL5Q9UKA1 691 aa16.56■□□□□ 0.24
PDGFB-202ENST00000381551 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.55■□□□□ 0.24
PDGFB-202ENST00000381551 TEX28O15482 410 aa16.55■□□□□ 0.24
PDGFB-202ENST00000381551 RPL17P18621 184 aaKnown RBP16.55■□□□□ 0.24
PDGFB-202ENST00000381551 LMO2P25791 158 aa16.55■□□□□ 0.24
PDGFB-202ENST00000381551 RAP1GAPP47736 663 aa16.55■□□□□ 0.24
PDGFB-202ENST00000381551 LHX1P48742 406 aa16.55■□□□□ 0.24
PDGFB-202ENST00000381551 APBA1Q02410 837 aa16.55■□□□□ 0.24
PDGFB-202ENST00000381551 CTXN3Q4LDR2 81 aa16.55■□□□□ 0.24
PDGFB-202ENST00000381551 ZNF280DQ6N043 979 aa16.55■□□□□ 0.24
PDGFB-202ENST00000381551 ADGRF2Q8IZF7 708 aa16.55■□□□□ 0.24
PDGFB-202ENST00000381551 ERGIC2Q96RQ1 377 aa16.55■□□□□ 0.24
PDGFB-202ENST00000381551 SIX2Q9NPC8 291 aa16.55■□□□□ 0.24
PDGFB-202ENST00000381551 DDX43Q9NXZ2 648 aaKnown RBP16.55■□□□□ 0.24
PDGFB-202ENST00000381551 NME7Q9Y5B8 376 aa16.55■□□□□ 0.24
PDGFB-202ENST00000381551 ADAM12O43184 909 aa16.54■□□□□ 0.24
PDGFB-202ENST00000381551 IGFBP4P22692 258 aa16.54■□□□□ 0.24
PDGFB-202ENST00000381551 OR1D2P34982 312 aa16.54■□□□□ 0.24
PDGFB-202ENST00000381551 CA8P35219 290 aa16.54■□□□□ 0.24
PDGFB-202ENST00000381551 UBASH3AP57075 661 aa16.54■□□□□ 0.24
PDGFB-202ENST00000381551 GCNT1Q02742 428 aa16.54■□□□□ 0.24
PDGFB-202ENST00000381551 CREMQ03060 361 aa16.54■□□□□ 0.24
PDGFB-202ENST00000381551 CUL2Q13617 745 aa16.54■□□□□ 0.24
PDGFB-202ENST00000381551 SLC8B1Q6J4K2 584 aa16.54■□□□□ 0.24
PDGFB-202ENST00000381551 SCARA5Q6ZMJ2 495 aa16.54■□□□□ 0.24
PDGFB-202ENST00000381551 RRAGAQ7L523 313 aa16.54■□□□□ 0.24
PDGFB-202ENST00000381551 ADGRD2Q7Z7M1 963 aa16.54■□□□□ 0.24
PDGFB-202ENST00000381551 ARHGEF19Q8IW93 802 aa16.54■□□□□ 0.24
PDGFB-202ENST00000381551 PPM1KQ8N3J5 372 aa16.54■□□□□ 0.24
PDGFB-202ENST00000381551 OR6B3Q8NGW1 331 aa16.54■□□□□ 0.24
PDGFB-202ENST00000381551 MYLIPQ8WY64 445 aa16.54■□□□□ 0.24
PDGFB-202ENST00000381551 GAS2L1Q99501 681 aaPredicted RBP16.54■□□□□ 0.24
PDGFB-202ENST00000381551 ARID3AQ99856 593 aa16.54■□□□□ 0.24
PDGFB-202ENST00000381551 ACBD6Q9BR61 282 aa16.54■□□□□ 0.24
PDGFB-202ENST00000381551 EMILIN2Q9BXX0 1053 aa16.54■□□□□ 0.24
PDGFB-202ENST00000381551 SNX25Q9H3E2 840 aa16.54■□□□□ 0.24
PDGFB-202ENST00000381551 FAM124BQ9H5Z6 455 aaPredicted RBP16.54■□□□□ 0.24
PDGFB-202ENST00000381551 TLE6Q9H808 572 aa16.54■□□□□ 0.24
PDGFB-202ENST00000381551 UBE2TQ9NPD8 197 aaPredicted RBP16.54■□□□□ 0.24
PDGFB-202ENST00000381551 APEX2Q9UBZ4 518 aa16.54■□□□□ 0.24
PDGFB-202ENST00000381551 SIK3Q9Y2K2 1263 aa16.54■□□□□ 0.24
PDGFB-202ENST00000381551 STXBP5LQ9Y2K9 1186 aa16.54■□□□□ 0.24
PDGFB-202ENST00000381551 CDY1Q9Y6F8 540 aa16.54■□□□□ 0.24
PDGFB-202ENST00000381551 COL4A4P53420 1690 aaPredicted RBP16.53■□□□□ 0.24
PDGFB-202ENST00000381551 OR6C75A6NL08 312 aa16.53■□□□□ 0.24
PDGFB-202ENST00000381551 PER2O15055 1255 aa16.53■□□□□ 0.24
PDGFB-202ENST00000381551 HCRTO43612 131 aa16.53■□□□□ 0.24
PDGFB-202ENST00000381551 CLASP2O75122 1294 aaKnown RBP16.53■□□□□ 0.24
PDGFB-202ENST00000381551 PDGFRBP09619 1106 aa16.53■□□□□ 0.24
PDGFB-202ENST00000381551 TBXAS1P24557 533 aaPredicted RBP16.53■□□□□ 0.24
PDGFB-202ENST00000381551 NDUFV1P49821 464 aa16.53■□□□□ 0.24
PDGFB-202ENST00000381551 KLK7P49862 253 aa16.53■□□□□ 0.24
PDGFB-202ENST00000381551 INCA1Q0VD86 236 aa16.53■□□□□ 0.24
PDGFB-202ENST00000381551 RAB33AQ14088 237 aa16.53■□□□□ 0.24
PDGFB-202ENST00000381551 SYCP1Q15431 976 aa16.53■□□□□ 0.24
PDGFB-202ENST00000381551 KLHDC7AQ5VTJ3 777 aa16.53■□□□□ 0.24
PDGFB-202ENST00000381551 GJB7Q6PEY0 223 aa16.53■□□□□ 0.24
PDGFB-202ENST00000381551 RBM23Q86U06 439 aaKnown RBP16.53■□□□□ 0.24
PDGFB-202ENST00000381551 TTC39CQ8N584 583 aa16.53■□□□□ 0.24
PDGFB-202ENST00000381551 OR10T2Q8NGX3 314 aa16.53■□□□□ 0.24
PDGFB-202ENST00000381551 KAT5Q92993 513 aa16.53■□□□□ 0.24
PDGFB-202ENST00000381551 KREMEN1Q96MU8 473 aa16.53■□□□□ 0.24
PDGFB-202ENST00000381551 NSUN3Q9H649 340 aaKnown RBP16.53■□□□□ 0.24
PDGFB-202ENST00000381551 PLCB1Q9NQ66 1216 aa16.53■□□□□ 0.24
PDGFB-202ENST00000381551 CISHQ9NSE2 258 aa16.53■□□□□ 0.24
PDGFB-202ENST00000381551 IFNKQ9P0W0 207 aa16.53■□□□□ 0.24
PDGFB-202ENST00000381551 BARX2Q9UMQ3 279 aaPredicted RBP16.53■□□□□ 0.24
PDGFB-202ENST00000381551 A8MXQ7 604 aa16.52■□□□□ 0.24
PDGFB-202ENST00000381551 NOL4O94818 638 aa16.52■□□□□ 0.24
PDGFB-202ENST00000381551 ADH1AP07327 375 aa16.52■□□□□ 0.24
PDGFB-202ENST00000381551 CD58P19256 250 aa16.52■□□□□ 0.24
PDGFB-202ENST00000381551 ACO1P21399 889 aaKnown RBP16.52■□□□□ 0.24
PDGFB-202ENST00000381551 ACAT1P24752 427 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms