RNA–Protein interactions for RNA: ENST00000378603.7

DDB2-204, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene DDB2, Length 1,092 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-204ENST00000378603 WDR72Q3MJ13 1102 aa12.2□□□□□ -0.46
DDB2-204ENST00000378603 CCDC40Q4G0X9 1142 aa12.2□□□□□ -0.46
DDB2-204ENST00000378603 PTCRAQ6ISU1 281 aaPredicted RBP12.2□□□□□ -0.46
DDB2-204ENST00000378603 LIMS2Q7Z4I7 341 aa12.2□□□□□ -0.46
DDB2-204ENST00000378603 GLYCTKQ8IVS8 523 aa12.2□□□□□ -0.46
DDB2-204ENST00000378603 C2orf15Q8WU43 125 aaKnown RBP12.2□□□□□ -0.46
DDB2-204ENST00000378603 RIPOR3Q96MK2 946 aa12.2□□□□□ -0.46
DDB2-204ENST00000378603 DUSP9Q99956 384 aaKnown RBP12.2□□□□□ -0.46
DDB2-204ENST00000378603 ACBD6Q9BR61 282 aa12.2□□□□□ -0.46
DDB2-204ENST00000378603 S1PR5Q9H228 398 aa12.2□□□□□ -0.46
DDB2-204ENST00000378603 PRKAG3Q9UGI9 489 aa12.2□□□□□ -0.46
DDB2-204ENST00000378603 AFF4Q9UHB7 1163 aaKnown RBP12.2□□□□□ -0.46
DDB2-204ENST00000378603 TIMM13Q9Y5L4 95 aaPredicted RBP12.2□□□□□ -0.46
DDB2-204ENST00000378603 GABRDO14764 452 aa12.19□□□□□ -0.46
DDB2-204ENST00000378603 PMM2O15305 246 aa12.19□□□□□ -0.46
DDB2-204ENST00000378603 N4BP1O75113 896 aaKnown RBP12.19□□□□□ -0.46
DDB2-204ENST00000378603 ZMYND10O75800 440 aa12.19□□□□□ -0.46
DDB2-204ENST00000378603 BMP1P13497 986 aa12.19□□□□□ -0.46
DDB2-204ENST00000378603 TRIM21P19474 475 aaKnown RBP12.19□□□□□ -0.46
DDB2-204ENST00000378603 PCSK1P29120 753 aa12.19□□□□□ -0.46
DDB2-204ENST00000378603 PIK3CAP42336 1068 aa12.19□□□□□ -0.46
DDB2-204ENST00000378603 MYL6P60660 151 aa12.19□□□□□ -0.46
DDB2-204ENST00000378603 TSPY1Q01534 308 aa12.19□□□□□ -0.46
DDB2-204ENST00000378603 CETN1Q12798 172 aa12.19□□□□□ -0.46
DDB2-204ENST00000378603 SMAD2Q15796 467 aaKnown RBP12.19□□□□□ -0.46
DDB2-204ENST00000378603 TPD52L1Q16890 204 aaPredicted RBP12.19□□□□□ -0.46
DDB2-204ENST00000378603 KLHL40Q2TBA0 621 aa12.19□□□□□ -0.46
DDB2-204ENST00000378603 SKOR2Q2VWA4 1001 aaPredicted RBP12.19□□□□□ -0.46
DDB2-204ENST00000378603 ZNF699Q32M78 642 aa12.19□□□□□ -0.46
DDB2-204ENST00000378603 ZNF667Q5HYK9 610 aa12.19□□□□□ -0.46
DDB2-204ENST00000378603 ATAT1Q5SQI0 421 aa12.19□□□□□ -0.46
DDB2-204ENST00000378603 C1orf220Q5T0J3 134 aa12.19□□□□□ -0.46
DDB2-204ENST00000378603 TCERG1LQ5VWI1 586 aa12.19□□□□□ -0.46
DDB2-204ENST00000378603 WSCD1Q658N2 575 aa12.19□□□□□ -0.46
DDB2-204ENST00000378603 SYCE2Q6PIF2 218 aa12.19□□□□□ -0.46
DDB2-204ENST00000378603 RSPO2Q6UXX9 243 aaPredicted RBP12.19□□□□□ -0.46
DDB2-204ENST00000378603 FAM114A1Q8IWE2 563 aa12.19□□□□□ -0.46
DDB2-204ENST00000378603 TCEAL8Q8IYN2 117 aa12.19□□□□□ -0.46
DDB2-204ENST00000378603 DCP1BQ8IZD4 617 aaKnown RBP12.19□□□□□ -0.46
DDB2-204ENST00000378603 ADGRF2Q8IZF7 708 aa12.19□□□□□ -0.46
DDB2-204ENST00000378603 PDCL2Q8N4E4 241 aa12.19□□□□□ -0.46
DDB2-204ENST00000378603 SRRTQ9BXP5 876 aaKnown RBP12.19□□□□□ -0.46
DDB2-204ENST00000378603 DNAI2Q9GZS0 605 aa12.19□□□□□ -0.46
DDB2-204ENST00000378603 XYLT2Q9H1B5 865 aa12.19□□□□□ -0.46
DDB2-204ENST00000378603 FAM124BQ9H5Z6 455 aaPredicted RBP12.19□□□□□ -0.46
DDB2-204ENST00000378603 CCDC195A0A1B0GUA6 201 aa12.18□□□□□ -0.46
DDB2-204ENST00000378603 WDR27A2RRH5 827 aa12.18□□□□□ -0.46
DDB2-204ENST00000378603 P4HA2O15460 535 aa12.18□□□□□ -0.46
DDB2-204ENST00000378603 ADAM12O43184 909 aa12.18□□□□□ -0.46
DDB2-204ENST00000378603 XYLBO75191 536 aa12.18□□□□□ -0.46
DDB2-204ENST00000378603 ASS1P00966 412 aaKnown RBP12.18□□□□□ -0.46
DDB2-204ENST00000378603 C8AP07357 584 aa12.18□□□□□ -0.46
DDB2-204ENST00000378603 WARSP23381 471 aaKnown RBP12.18□□□□□ -0.46
DDB2-204ENST00000378603 GCLMP48507 274 aa12.18□□□□□ -0.46
DDB2-204ENST00000378603 MXI1P50539 228 aa12.18□□□□□ -0.46
DDB2-204ENST00000378603 STX17P56962 302 aa12.18□□□□□ -0.46
DDB2-204ENST00000378603 RBM10P98175 930 aaKnown RBP12.18□□□□□ -0.46
DDB2-204ENST00000378603 PPP3CAQ08209 521 aa12.18□□□□□ -0.46
DDB2-204ENST00000378603 PLD1Q13393 1074 aa12.18□□□□□ -0.46
DDB2-204ENST00000378603 MAPRE1Q15691 268 aaKnown RBP12.18□□□□□ -0.46
DDB2-204ENST00000378603 NFE2Q16621 373 aaPredicted RBP12.18□□□□□ -0.46
DDB2-204ENST00000378603 SOWAHAQ2M3V2 549 aa12.18□□□□□ -0.46
DDB2-204ENST00000378603 DPCR1Q3MIW9 517 aa12.18□□□□□ -0.46
DDB2-204ENST00000378603 DCAF17Q5H9S7 520 aaPredicted RBP12.18□□□□□ -0.46
DDB2-204ENST00000378603 PPM1LQ5SGD2 360 aa12.18□□□□□ -0.46
DDB2-204ENST00000378603 GPR149Q86SP6 731 aa12.18□□□□□ -0.46
DDB2-204ENST00000378603 TMEM130Q8N3G9 435 aa12.18□□□□□ -0.46
DDB2-204ENST00000378603 TTC39CQ8N584 583 aa12.18□□□□□ -0.46
DDB2-204ENST00000378603 FBXL13Q8NEE6 735 aa12.18□□□□□ -0.46
DDB2-204ENST00000378603 SPPL2BQ8TCT7 592 aa12.18□□□□□ -0.46
DDB2-204ENST00000378603 SUSD6Q92537 303 aa12.18□□□□□ -0.46
DDB2-204ENST00000378603 EEF2KMTQ96G04 330 aa12.18□□□□□ -0.46
DDB2-204ENST00000378603 MMS19Q96T76 1030 aa12.18□□□□□ -0.46
DDB2-204ENST00000378603 PRKD2Q9BZL6 878 aa12.18□□□□□ -0.46
DDB2-204ENST00000378603 ZCWPW1Q9H0M4 648 aa12.18□□□□□ -0.46
DDB2-204ENST00000378603 THAP9Q9H5L6 903 aa12.18□□□□□ -0.46
DDB2-204ENST00000378603 ANO10Q9NW15 660 aa12.18□□□□□ -0.46
DDB2-204ENST00000378603 DDX43Q9NXZ2 648 aaKnown RBP12.18□□□□□ -0.46
DDB2-204ENST00000378603 L1RE1Q9UN81 338 aa12.18□□□□□ -0.46
DDB2-204ENST00000378603 COQ4Q9Y3A0 265 aa12.18□□□□□ -0.46
DDB2-204ENST00000378603 PRRG1O14668 218 aa12.17□□□□□ -0.46
DDB2-204ENST00000378603 VNN1O95497 513 aa12.17□□□□□ -0.46
DDB2-204ENST00000378603 HLA-DRAP01903 254 aa12.17□□□□□ -0.46
DDB2-204ENST00000378603 LRG1P02750 347 aa12.17□□□□□ -0.46
DDB2-204ENST00000378603 TRIM49P0CI25 452 aa12.17□□□□□ -0.46
DDB2-204ENST00000378603 TRIM49CP0CI26 452 aa12.17□□□□□ -0.46
DDB2-204ENST00000378603 KCNQ1P51787 676 aa12.17□□□□□ -0.46
DDB2-204ENST00000378603 ARPP19P56211 112 aa12.17□□□□□ -0.46
DDB2-204ENST00000378603 CBX2Q14781 532 aaPredicted RBP12.17□□□□□ -0.46
DDB2-204ENST00000378603 WDR44Q5JSH3 913 aa12.17□□□□□ -0.46
DDB2-204ENST00000378603 RARS2Q5T160 578 aaKnown RBP12.17□□□□□ -0.46
DDB2-204ENST00000378603 SLC7A14Q8TBB6 771 aa12.17□□□□□ -0.46
DDB2-204ENST00000378603 SLC35C1Q96A29 364 aa12.17□□□□□ -0.46
DDB2-204ENST00000378603 RAB20Q9NX57 234 aa12.17□□□□□ -0.46
DDB2-204ENST00000378603 CDH9Q9ULB4 789 aa12.17□□□□□ -0.46
DDB2-204ENST00000378603 USP15Q9Y4E8 981 aaPredicted RBP12.17□□□□□ -0.46
DDB2-204ENST00000378603 TCF20Q9UGU0 1960 aaKnown RBP12.17□□□□□ -0.46
DDB2-204ENST00000378603 PTPRDP23468 1912 aa12.17□□□□□ -0.46
DDB2-204ENST00000378603 UNC80Q8N2C7 3258 aa12.16□□□□□ -0.46
DDB2-204ENST00000378603 CLSTN1O94985 981 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms