RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 GAS2L1Q99501 681 aaPredicted RBP15.38■□□□□ 0.05
NOTCH4-201ENST00000375023 DDX50Q9BQ39 737 aaKnown RBP15.38■□□□□ 0.05
NOTCH4-201ENST00000375023 SMARCAD1Q9H4L7 1026 aa15.38■□□□□ 0.05
NOTCH4-201ENST00000375023 TUFT1Q9NNX1 390 aa15.38■□□□□ 0.05
NOTCH4-201ENST00000375023 GTF2A1LQ9UNN4 478 aa15.38■□□□□ 0.05
NOTCH4-201ENST00000375023 HLA-DRAP01903 254 aa15.38■□□□□ 0.05
NOTCH4-201ENST00000375023 VTNP04004 478 aa15.38■□□□□ 0.05
NOTCH4-201ENST00000375023 CCDC81Q6ZN84 652 aa15.38■□□□□ 0.05
NOTCH4-201ENST00000375023 RCOR2Q8IZ40 523 aa15.38■□□□□ 0.05
NOTCH4-201ENST00000375023 ZNF614Q8N883 585 aa15.38■□□□□ 0.05
NOTCH4-201ENST00000375023 MAGED4Q96JG8 741 aa15.38■□□□□ 0.05
NOTCH4-201ENST00000375023 CAND2O75155 1236 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 PGK2P07205 417 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 CYP2C9P11712 490 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 CASP4P49662 377 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 GUF1Q8N442 669 aaKnown RBP15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 ATL2Q8NHH9 583 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 IL17RAQ96F46 866 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 OTUB1Q96FW1 271 aaPredicted RBP15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 TAAR1Q96RJ0 339 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 STARD7Q9NQZ5 370 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 NEO1Q92859 1461 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 TMC7Q7Z402 723 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 VPS50Q96JG6 964 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 PTPRHQ9HD43 1115 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 AAASQ9NRG9 546 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 SLC39A10Q9ULF5 831 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 ZNRF3Q9ULT6 936 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 FAM32AQ9Y421 112 aaKnown RBP15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 RPAP1Q9BWH6 1393 aaPredicted RBP15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 CYTH3O43739 400 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 SYNCRIPO60506 623 aaKnown RBP15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 PARNO95453 639 aaKnown RBP15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 EFNA5P52803 228 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 PLOD1Q02809 727 aaPredicted RBP15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 ZNF543Q08ER8 600 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 IER5Q5VY09 327 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 TRIM72Q6ZMU5 477 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 ADCK1Q86TW2 530 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 DNAAF5Q86Y56 855 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 BLOC1S5Q8TDH9 187 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 PHF21AQ96BD5 680 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 NDOR1Q9UHB4 597 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 TERF2Q15554 542 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 DENND5BQ6ZUT9 1274 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 EXOSC4Q9NPD3 245 aaKnown RBP15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 GPRC5CQ9NQ84 441 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 LINC00854A0A1B0GVQ3 168 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 STX3Q13277 289 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 ATG9AQ7Z3C6 839 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 SPATA21Q7Z572 469 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 MIB1Q86YT6 1006 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 ZNF555Q8NEP9 628 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 PIK3R5Q8WYR1 880 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 HES6Q96HZ4 224 aa15.37■□□□□ 0.05
NOTCH4-201ENST00000375023 PITPNM2Q9BZ72 1349 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 GRID2IPA4D2P6 1211 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 XPO1O14980 1071 aaKnown RBP15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 WDR47O94967 919 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 CETPP11597 493 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 CDC16Q13042 620 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 STK4Q13043 487 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 NR1H3Q13133 447 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 RARS2Q5T160 578 aaKnown RBP15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 NEDD1Q8NHV4 660 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 WNK4Q96J92 1243 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 RHOBTB1O94844 696 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 DDX5P17844 614 aaKnown RBP15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 VN1R5Q7Z5H4 357 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 FZD1Q9UP38 647 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 CLASP1Q7Z460 1538 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 TARSL2A2RTX5 802 aaKnown RBP15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 DDNO94850 711 aaPredicted RBP15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 NR3C2P08235 984 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 COMTP21964 271 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 KLRC2P26717 231 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 KLRK1P26718 216 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 RANBP1P43487 201 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 ZFP42Q96MM3 310 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 HERC5Q9UII4 1024 aaKnown RBP15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 ALDH1A2O94788 518 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 ZNF200P98182 395 aaPredicted RBP15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 PHKG1Q16816 387 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 ARHGEF26Q96DR7 871 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 TRIM9Q9C026 710 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 KCTD10Q9H3F6 313 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 RBM12Q9NTZ6 932 aaKnown RBP15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 STOML1Q9UBI4 398 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 TPST1O60507 370 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 UCHL3P15374 230 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 TCF7P36402 384 aaPredicted RBP15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 GALNTL6Q49A17 601 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 KCNT1Q5JUK3 1230 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 HORMAD1Q86X24 394 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 SCFD1Q8WVM8 642 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 TARS2Q9BW92 718 aaKnown RBP15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 TEX13BQ9BXU2 312 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 NMRK2Q9NPI5 230 aa15.36■□□□□ 0.05
NOTCH4-201ENST00000375023 FBXO28Q9NVF7 368 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms