RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 LDHAP00338 332 aaKnown RBP18.04■□□□□ 0.48
RXRB-201ENST00000374680 CXCL8P10145 99 aa18.04■□□□□ 0.48
RXRB-201ENST00000374680 MYBL1P10243 752 aa18.04■□□□□ 0.48
RXRB-201ENST00000374680 RFC1P35251 1148 aaPredicted RBP18.04■□□□□ 0.48
RXRB-201ENST00000374680 OAZ1P54368 228 aa18.04■□□□□ 0.48
RXRB-201ENST00000374680 LACTBP83111 547 aaPredicted RBP18.04■□□□□ 0.48
RXRB-201ENST00000374680 KLF1Q13351 362 aaPredicted RBP18.04■□□□□ 0.48
RXRB-201ENST00000374680 ZNF699Q32M78 642 aa18.04■□□□□ 0.48
RXRB-201ENST00000374680 Q3C1V9 767 aa18.04■□□□□ 0.48
RXRB-201ENST00000374680 PLEKHA7Q6IQ23 1121 aa18.04■□□□□ 0.48
RXRB-201ENST00000374680 TRMT10CQ7L0Y3 403 aaKnown RBP18.04■□□□□ 0.48
RXRB-201ENST00000374680 PLCD3Q8N3E9 789 aa18.04■□□□□ 0.48
RXRB-201ENST00000374680 WDTC1Q8N5D0 677 aa18.04■□□□□ 0.48
RXRB-201ENST00000374680 JOSD2Q8TAC2 188 aa18.04■□□□□ 0.48
RXRB-201ENST00000374680 MINDY3Q9H8M7 445 aa18.04■□□□□ 0.48
RXRB-201ENST00000374680 AGTPBP1Q9UPW5 1226 aa18.04■□□□□ 0.48
RXRB-201ENST00000374680 FZD9O00144 591 aa18.04■□□□□ 0.48
RXRB-201ENST00000374680 TAF5Q15542 800 aa18.04■□□□□ 0.48
RXRB-201ENST00000374680 MAPK6Q16659 721 aa18.04■□□□□ 0.48
RXRB-201ENST00000374680 ZNF568Q3ZCX4 644 aa18.04■□□□□ 0.48
RXRB-201ENST00000374680 ZNF677Q86XU0 584 aa18.04■□□□□ 0.48
RXRB-201ENST00000374680 GRK7Q8WTQ7 553 aa18.04■□□□□ 0.48
RXRB-201ENST00000374680 TRIM11Q96F44 468 aa18.04■□□□□ 0.48
RXRB-201ENST00000374680 SPATC1LQ9H0A9 340 aa18.04■□□□□ 0.48
RXRB-201ENST00000374680 MSCO60682 206 aa18.03■□□□□ 0.48
RXRB-201ENST00000374680 GRAP2O75791 330 aa18.03■□□□□ 0.48
RXRB-201ENST00000374680 PAEPP09466 180 aa18.03■□□□□ 0.48
RXRB-201ENST00000374680 MMP8P22894 467 aa18.03■□□□□ 0.48
RXRB-201ENST00000374680 GBP1P32455 592 aa18.03■□□□□ 0.48
RXRB-201ENST00000374680 CLDN10P78369 228 aa18.03■□□□□ 0.48
RXRB-201ENST00000374680 DUOXA2Q1HG44 320 aa18.03■□□□□ 0.48
RXRB-201ENST00000374680 VSTM1Q6UX27 236 aa18.03■□□□□ 0.48
RXRB-201ENST00000374680 SPATS2Q86XZ4 545 aaKnown RBP18.03■□□□□ 0.48
RXRB-201ENST00000374680 C4orf33Q8N1A6 199 aa18.03■□□□□ 0.48
RXRB-201ENST00000374680 STYXL1Q9Y6J8 313 aa18.03■□□□□ 0.48
RXRB-201ENST00000374680 FSBPO95073 299 aa18.03■□□□□ 0.48
RXRB-201ENST00000374680 CPP00450 1065 aa18.03■□□□□ 0.48
RXRB-201ENST00000374680 ASS1P00966 412 aaKnown RBP18.03■□□□□ 0.48
RXRB-201ENST00000374680 CD48P09326 243 aa18.03■□□□□ 0.48
RXRB-201ENST00000374680 MAGEA4P43358 317 aa18.03■□□□□ 0.48
RXRB-201ENST00000374680 CCNG2Q16589 344 aa18.03■□□□□ 0.48
RXRB-201ENST00000374680 APOBEC3FQ8IUX4 373 aaKnown RBP18.03■□□□□ 0.48
RXRB-201ENST00000374680 CCDC89Q8N998 374 aa18.03■□□□□ 0.48
RXRB-201ENST00000374680 MRPL4Q9BYD3 311 aaKnown RBP18.03■□□□□ 0.48
RXRB-201ENST00000374680 TXNRD2Q9NNW7 524 aa18.03■□□□□ 0.48
RXRB-201ENST00000374680 NEU2Q9Y3R4 380 aa18.03■□□□□ 0.48
RXRB-201ENST00000374680 SNCAIPQ9Y6H5 919 aa18.03■□□□□ 0.48
RXRB-201ENST00000374680 TMEM191CA6NGB0 347 aa18.02■□□□□ 0.48
RXRB-201ENST00000374680 PECAM1P16284 738 aaPredicted RBP18.02■□□□□ 0.48
RXRB-201ENST00000374680 TBXAS1P24557 533 aaPredicted RBP18.02■□□□□ 0.48
RXRB-201ENST00000374680 GTF2A1P52655 376 aaPredicted RBP18.02■□□□□ 0.48
RXRB-201ENST00000374680 LBX2Q6XYB7 198 aa18.02■□□□□ 0.48
RXRB-201ENST00000374680 TBC1D1Q86TI0 1168 aaPredicted RBP18.02■□□□□ 0.48
RXRB-201ENST00000374680 C12orf42Q96LP6 360 aa18.02■□□□□ 0.48
RXRB-201ENST00000374680 SPATA33Q96N06 139 aa18.02■□□□□ 0.48
RXRB-201ENST00000374680 SLITRK1Q96PX8 696 aa18.02■□□□□ 0.48
RXRB-201ENST00000374680 HOMER3Q9NSC5 361 aa18.02■□□□□ 0.48
RXRB-201ENST00000374680 HMGXB4Q9UGU5 601 aa18.02■□□□□ 0.48
RXRB-201ENST00000374680 POLR2AP24928 1970 aaKnown RBP18.02■□□□□ 0.48
RXRB-201ENST00000374680 RASA4BC9J798 803 aa18.02■□□□□ 0.48
RXRB-201ENST00000374680 RASA4O43374 803 aa18.02■□□□□ 0.48
RXRB-201ENST00000374680 TOM1L1O75674 476 aa18.02■□□□□ 0.48
RXRB-201ENST00000374680 ATG7O95352 703 aa18.02■□□□□ 0.48
RXRB-201ENST00000374680 PSMA2P25787 234 aa18.02■□□□□ 0.48
RXRB-201ENST00000374680 STX2P32856 288 aa18.02■□□□□ 0.48
RXRB-201ENST00000374680 RAB6CQ53S08 254 aa18.02■□□□□ 0.48
RXRB-201ENST00000374680 PNMA8AQ86V59 439 aaPredicted RBP18.02■□□□□ 0.48
RXRB-201ENST00000374680 BRSK2Q8IWQ3 736 aa18.02■□□□□ 0.48
RXRB-201ENST00000374680 ZBED8Q8IZ13 594 aa18.02■□□□□ 0.48
RXRB-201ENST00000374680 ANKS4BQ8N8V4 417 aa18.02■□□□□ 0.48
RXRB-201ENST00000374680 UBA3Q8TBC4 463 aa18.02■□□□□ 0.48
RXRB-201ENST00000374680 SPOCK2Q92563 424 aa18.02■□□□□ 0.48
RXRB-201ENST00000374680 HSPH1Q92598 858 aa18.02■□□□□ 0.48
RXRB-201ENST00000374680 ACO2Q99798 780 aaKnown RBP18.02■□□□□ 0.48
RXRB-201ENST00000374680 RAB6CQ9H0N0 254 aa18.02■□□□□ 0.48
RXRB-201ENST00000374680 GPRC5DQ9NZD1 345 aa18.02■□□□□ 0.48
RXRB-201ENST00000374680 IP6K2Q9UHH9 426 aa18.02■□□□□ 0.48
RXRB-201ENST00000374680 SCINQ9Y6U3 715 aa18.02■□□□□ 0.48
RXRB-201ENST00000374680 ADGRA2Q96PE1 1338 aa18.02■□□□□ 0.48
RXRB-201ENST00000374680 LOXHD1Q8IVV2 1947 aa18.02■□□□□ 0.48
RXRB-201ENST00000374680 PSME4Q14997 1843 aa18.02■□□□□ 0.47
RXRB-201ENST00000374680 CCT8L1PA6NM43 557 aa18.02■□□□□ 0.47
RXRB-201ENST00000374680 CETN2P41208 172 aa18.02■□□□□ 0.47
RXRB-201ENST00000374680 ICE2Q659A1 982 aa18.02■□□□□ 0.47
RXRB-201ENST00000374680 HIBCHQ6NVY1 386 aaPredicted RBP18.02■□□□□ 0.47
RXRB-201ENST00000374680 CEP57Q86XR8 500 aa18.02■□□□□ 0.47
RXRB-201ENST00000374680 PHF13Q86YI8 300 aaPredicted RBP18.02■□□□□ 0.47
RXRB-201ENST00000374680 TMEM35BQ8NCS4 154 aa18.02■□□□□ 0.47
RXRB-201ENST00000374680 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.02■□□□□ 0.47
RXRB-201ENST00000374680 SLC16A10Q8TF71 515 aa18.02■□□□□ 0.47
RXRB-201ENST00000374680 TCP11Q8WWU5 503 aa18.02■□□□□ 0.47
RXRB-201ENST00000374680 CCT6BQ92526 530 aa18.02■□□□□ 0.47
RXRB-201ENST00000374680 CPB2Q96IY4 423 aa18.02■□□□□ 0.47
RXRB-201ENST00000374680 C12orf65Q9H3J6 166 aaKnown RBP18.02■□□□□ 0.47
RXRB-201ENST00000374680 KLC4Q9NSK0 619 aa18.02■□□□□ 0.47
RXRB-201ENST00000374680 GINM1Q9NU53 330 aa18.02■□□□□ 0.47
RXRB-201ENST00000374680 CYTH4Q9UIA0 394 aa18.02■□□□□ 0.47
RXRB-201ENST00000374680 EXOC1LA0A1B0GW35 172 aa18.01■□□□□ 0.47
RXRB-201ENST00000374680 FAM160B1Q5W0V3 765 aa18.01■□□□□ 0.47
RXRB-201ENST00000374680 KATNAL2Q8IYT4 538 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms