RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 SMIM24O75264 130 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 HIST1H2AGP0C0S8 130 aaPredicted RBP15.44■□□□□ 0.06
NDC1-201ENST00000371429 VDRP11473 427 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 HIST1H2ADP20671 130 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 TOB1P50616 345 aaPredicted RBP15.44■□□□□ 0.06
NDC1-201ENST00000371429 PTK2BQ14289 1009 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 MTHFD1LQ6UB35 978 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 ANKMY2Q8IV38 441 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 KRT35Q92764 455 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 HIST1H2AHQ96KK5 128 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 CGRRF1Q99675 332 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 HIST1H2AJQ99878 128 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 H2AFJQ9BTM1 129 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 DBR1Q9UK59 544 aaKnown RBP15.44■□□□□ 0.06
NDC1-201ENST00000371429 WTIPA6NIX2 430 aaPredicted RBP15.44■□□□□ 0.06
NDC1-201ENST00000371429 GUCY2CP25092 1073 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 FOXD4Q12950 439 aaPredicted RBP15.44■□□□□ 0.06
NDC1-201ENST00000371429 IQSEC1Q6DN90 963 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 MIPOL1Q8TD10 442 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 DDX27Q96GQ7 796 aaKnown RBP15.44■□□□□ 0.06
NDC1-201ENST00000371429 CLMNQ96JQ2 1002 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 ERGIC2Q96RQ1 377 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 WDCPQ9H6R7 721 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 TRPM5Q9NZQ8 1165 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 KANSL3Q9P2N6 904 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 NDUFS3O75489 264 aa15.43■□□□□ 0.06
NDC1-201ENST00000371429 ETFBP38117 255 aa15.43■□□□□ 0.06
NDC1-201ENST00000371429 KLK7P49862 253 aa15.43■□□□□ 0.06
NDC1-201ENST00000371429 FBXO38Q6PIJ6 1188 aa15.43■□□□□ 0.06
NDC1-201ENST00000371429 SYDE1Q6ZW31 735 aaPredicted RBP15.43■□□□□ 0.06
NDC1-201ENST00000371429 UPF3AQ9H1J1 476 aaKnown RBP15.43■□□□□ 0.06
NDC1-201ENST00000371429 KBTBD4Q9NVX7 518 aa15.43■□□□□ 0.06
NDC1-201ENST00000371429 DEPDC5O75140 1603 aa15.43■□□□□ 0.06
NDC1-201ENST00000371429 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.43■□□□□ 0.06
NDC1-201ENST00000371429 A0A1W2PQJ5 194 aa15.43■□□□□ 0.06
NDC1-201ENST00000371429 OPHN1O60890 802 aa15.43■□□□□ 0.06
NDC1-201ENST00000371429 MYO1DO94832 1006 aa15.43■□□□□ 0.06
NDC1-201ENST00000371429 RBP3P10745 1247 aa15.43■□□□□ 0.06
NDC1-201ENST00000371429 MBL2P11226 248 aaPredicted RBP15.43■□□□□ 0.06
NDC1-201ENST00000371429 DNAJB2P25686 324 aa15.43■□□□□ 0.06
NDC1-201ENST00000371429 ADCYAP1R1P41586 468 aa15.43■□□□□ 0.06
NDC1-201ENST00000371429 SOX10P56693 466 aa15.43■□□□□ 0.06
NDC1-201ENST00000371429 ZNF177Q13360 481 aaPredicted RBP15.43■□□□□ 0.06
NDC1-201ENST00000371429 NFE2Q16621 373 aaPredicted RBP15.43■□□□□ 0.06
NDC1-201ENST00000371429 CHADLQ6NUI6 762 aa15.43■□□□□ 0.06
NDC1-201ENST00000371429 TRIM65Q6PJ69 517 aa15.43■□□□□ 0.06
NDC1-201ENST00000371429 ZNF467Q7Z7K2 595 aaPredicted RBP15.43■□□□□ 0.06
NDC1-201ENST00000371429 CYFIP2Q96F07 1278 aa15.43■□□□□ 0.06
NDC1-201ENST00000371429 CYTH2Q99418 400 aa15.43■□□□□ 0.06
NDC1-201ENST00000371429 ALG6Q9Y672 507 aa15.43■□□□□ 0.06
NDC1-201ENST00000371429 GAKO14976 1311 aa15.43■□□□□ 0.06
NDC1-201ENST00000371429 CASTOR2A6NHX0 329 aa15.43■□□□□ 0.06
NDC1-201ENST00000371429 MAP4P27816 1152 aaKnown RBP15.43■□□□□ 0.06
NDC1-201ENST00000371429 RAB27AP51159 221 aa15.43■□□□□ 0.06
NDC1-201ENST00000371429 MAGOHP61326 146 aaKnown RBP15.43■□□□□ 0.06
NDC1-201ENST00000371429 FSCBQ5H9T9 825 aa15.43■□□□□ 0.06
NDC1-201ENST00000371429 TRIM68Q6AZZ1 485 aa15.43■□□□□ 0.06
NDC1-201ENST00000371429 NUDCD3Q8IVD9 361 aa15.43■□□□□ 0.06
NDC1-201ENST00000371429 VGLL2Q8N8G2 317 aa15.43■□□□□ 0.06
NDC1-201ENST00000371429 FOPNLQ96NB1 174 aa15.43■□□□□ 0.06
NDC1-201ENST00000371429 ELAC2Q9BQ52 826 aaKnown RBP15.43■□□□□ 0.06
NDC1-201ENST00000371429 IRX2Q9BZI1 471 aaPredicted RBP15.43■□□□□ 0.06
NDC1-201ENST00000371429 LATS2Q9NRM7 1088 aa15.43■□□□□ 0.06
NDC1-201ENST00000371429 TBKBP1A7MCY6 615 aa15.43■□□□□ 0.06
NDC1-201ENST00000371429 GFAPP14136 432 aa15.43■□□□□ 0.06
NDC1-201ENST00000371429 BYSLQ13895 437 aaKnown RBP15.43■□□□□ 0.06
NDC1-201ENST00000371429 PPP1R2P1Q96PQ5 205 aa15.43■□□□□ 0.06
NDC1-201ENST00000371429 TRAIPQ9BWF2 469 aa15.43■□□□□ 0.06
NDC1-201ENST00000371429 MLXIPLQ9NP71 852 aa15.43■□□□□ 0.06
NDC1-201ENST00000371429 DPP7Q9UHL4 492 aa15.43■□□□□ 0.06
NDC1-201ENST00000371429 CCDC195A0A1B0GUA6 201 aa15.42■□□□□ 0.06
NDC1-201ENST00000371429 MTSS1O43312 755 aa15.42■□□□□ 0.06
NDC1-201ENST00000371429 UGP2Q16851 508 aa15.42■□□□□ 0.06
NDC1-201ENST00000371429 MFN1Q8IWA4 741 aa15.42■□□□□ 0.06
NDC1-201ENST00000371429 ENGASEQ8NFI3 743 aa15.42■□□□□ 0.06
NDC1-201ENST00000371429 NCLNQ969V3 563 aa15.42■□□□□ 0.06
NDC1-201ENST00000371429 CFAP99D6REC4 459 aa15.42■□□□□ 0.06
NDC1-201ENST00000371429 LHX1P48742 406 aa15.42■□□□□ 0.06
NDC1-201ENST00000371429 PSEN2P49810 448 aa15.42■□□□□ 0.06
NDC1-201ENST00000371429 BTG3Q14201 252 aaPredicted RBP15.42■□□□□ 0.06
NDC1-201ENST00000371429 RGMBQ6NW40 437 aa15.42■□□□□ 0.06
NDC1-201ENST00000371429 NIPA1Q7RTP0 329 aa15.42■□□□□ 0.06
NDC1-201ENST00000371429 TSSK1BQ9BXA7 367 aa15.42■□□□□ 0.06
NDC1-201ENST00000371429 PPLO60437 1756 aa15.42■□□□□ 0.06
NDC1-201ENST00000371429 FOXN3O00409 490 aaPredicted RBP15.42■□□□□ 0.06
NDC1-201ENST00000371429 TLR2O60603 784 aa15.42■□□□□ 0.06
NDC1-201ENST00000371429 SYF2O95926 243 aaKnown RBP15.42■□□□□ 0.06
NDC1-201ENST00000371429 POMCP01189 267 aa15.42■□□□□ 0.06
NDC1-201ENST00000371429 CXCL8P10145 99 aa15.42■□□□□ 0.06
NDC1-201ENST00000371429 RARRES1P49788 294 aa15.42■□□□□ 0.06
NDC1-201ENST00000371429 MORF4L2Q15014 288 aa15.42■□□□□ 0.06
NDC1-201ENST00000371429 ANKRD20A4Q4UJ75 823 aa15.42■□□□□ 0.06
NDC1-201ENST00000371429 ANKRD20A8PQ5CZ79 823 aa15.42■□□□□ 0.06
NDC1-201ENST00000371429 ANKRD20A2Q5SQ80 823 aa15.42■□□□□ 0.06
NDC1-201ENST00000371429 ANKRD20A1Q5TYW2 823 aa15.42■□□□□ 0.06
NDC1-201ENST00000371429 CERS5Q8N5B7 392 aa15.42■□□□□ 0.06
NDC1-201ENST00000371429 IPMKQ8NFU5 416 aa15.42■□□□□ 0.06
NDC1-201ENST00000371429 TMC2Q8TDI7 906 aa15.42■□□□□ 0.06
NDC1-201ENST00000371429 UCMAQ8WVF2 138 aa15.42■□□□□ 0.06
NDC1-201ENST00000371429 GPR63Q9BZJ6 419 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms