RNA–Protein interactions for RNA: ENST00000370902.7

EXOSC1-204, Transcript of exosome component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC1, Length 923 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-204ENST00000370902 CSRP2Q16527 193 aa12□□□□□ -0.49
EXOSC1-204ENST00000370902 DNAJB7Q7Z6W7 309 aaPredicted RBP12□□□□□ -0.49
EXOSC1-204ENST00000370902 LONP2Q86WA8 852 aa12□□□□□ -0.49
EXOSC1-204ENST00000370902 TTC8Q8TAM2 541 aa12□□□□□ -0.49
EXOSC1-204ENST00000370902 NETO1Q8TDF5 533 aa12□□□□□ -0.49
EXOSC1-204ENST00000370902 SECISBP2LQ93073 1101 aaKnown RBP12□□□□□ -0.49
EXOSC1-204ENST00000370902 PLIN2Q99541 437 aa12□□□□□ -0.49
EXOSC1-204ENST00000370902 REEP2Q9BRK0 252 aa12□□□□□ -0.49
EXOSC1-204ENST00000370902 RAB34Q9BZG1 259 aa12□□□□□ -0.49
EXOSC1-204ENST00000370902 GPR88Q9GZN0 384 aa12□□□□□ -0.49
EXOSC1-204ENST00000370902 IKZF4Q9H2S9 585 aa12□□□□□ -0.49
EXOSC1-204ENST00000370902 RXFP3Q9NSD7 469 aa12□□□□□ -0.49
EXOSC1-204ENST00000370902 BLOC1S4Q9NUP1 217 aa12□□□□□ -0.49
EXOSC1-204ENST00000370902 OBP2AQ9NY56 170 aa12□□□□□ -0.49
EXOSC1-204ENST00000370902 CPSF3Q9UKF6 684 aaKnown RBP12□□□□□ -0.49
EXOSC1-204ENST00000370902 A0A0B4J269 797 aa11.99□□□□□ -0.49
EXOSC1-204ENST00000370902 PIRO00625 290 aa11.99□□□□□ -0.49
EXOSC1-204ENST00000370902 TM4SF5O14894 197 aa11.99□□□□□ -0.49
EXOSC1-204ENST00000370902 TADA3O75528 432 aa11.99□□□□□ -0.49
EXOSC1-204ENST00000370902 PLA2G4BP0C869 781 aa11.99□□□□□ -0.49
EXOSC1-204ENST00000370902 GABRR2P28476 465 aa11.99□□□□□ -0.49
EXOSC1-204ENST00000370902 CDR1P51861 262 aa11.99□□□□□ -0.49
EXOSC1-204ENST00000370902 WNT7BP56706 349 aa11.99□□□□□ -0.49
EXOSC1-204ENST00000370902 PPP2R3AQ06190 1150 aa11.99□□□□□ -0.49
EXOSC1-204ENST00000370902 STRN3Q13033 797 aa11.99□□□□□ -0.49
EXOSC1-204ENST00000370902 PLD1Q13393 1074 aa11.99□□□□□ -0.49
EXOSC1-204ENST00000370902 SIM2Q14190 667 aaPredicted RBP11.99□□□□□ -0.49
EXOSC1-204ENST00000370902 PON2Q15165 354 aa11.99□□□□□ -0.49
EXOSC1-204ENST00000370902 C9orf57Q5W0N0 161 aa11.99□□□□□ -0.49
EXOSC1-204ENST00000370902 OVOS1Q6IE37 1185 aa11.99□□□□□ -0.49
EXOSC1-204ENST00000370902 JADE1Q6IE81 842 aa11.99□□□□□ -0.49
EXOSC1-204ENST00000370902 DTHD1Q6ZMT9 781 aa11.99□□□□□ -0.49
EXOSC1-204ENST00000370902 PRR23BQ6ZRT6 265 aa11.99□□□□□ -0.49
EXOSC1-204ENST00000370902 HAUS6Q7Z4H7 955 aa11.99□□□□□ -0.49
EXOSC1-204ENST00000370902 WDR5BQ86VZ2 330 aa11.99□□□□□ -0.49
EXOSC1-204ENST00000370902 RALGPS2Q86X27 583 aaPredicted RBP11.99□□□□□ -0.49
EXOSC1-204ENST00000370902 FAM160A2Q8N612 972 aaPredicted RBP11.99□□□□□ -0.49
EXOSC1-204ENST00000370902 E2F7Q96AV8 911 aa11.99□□□□□ -0.49
EXOSC1-204ENST00000370902 SENP8Q96LD8 212 aa11.99□□□□□ -0.49
EXOSC1-204ENST00000370902 OXCT2Q9BYC2 517 aaPredicted RBP11.99□□□□□ -0.49
EXOSC1-204ENST00000370902 ZCWPW1Q9H0M4 648 aa11.99□□□□□ -0.49
EXOSC1-204ENST00000370902 SMG9Q9H0W8 520 aaKnown RBP11.99□□□□□ -0.49
EXOSC1-204ENST00000370902 SLITRK6Q9H5Y7 841 aa11.99□□□□□ -0.49
EXOSC1-204ENST00000370902 C8orf33Q9H7E9 229 aaPredicted RBP11.99□□□□□ -0.49
EXOSC1-204ENST00000370902 HPS4Q9NQG7 708 aa11.99□□□□□ -0.49
EXOSC1-204ENST00000370902 KCND2Q9NZV8 630 aa11.99□□□□□ -0.49
EXOSC1-204ENST00000370902 HSFX1Q9UBD0 423 aa11.99□□□□□ -0.49
EXOSC1-204ENST00000370902 TBX20Q9UMR3 447 aa11.99□□□□□ -0.49
EXOSC1-204ENST00000370902 AKAP13Q12802 2813 aa11.99□□□□□ -0.49
EXOSC1-204ENST00000370902 SDK1Q7Z5N4 2213 aa11.98□□□□□ -0.49
EXOSC1-204ENST00000370902 TNRC6BQ9UPQ9 1833 aaKnown RBP11.98□□□□□ -0.49
EXOSC1-204ENST00000370902 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.98□□□□□ -0.49
EXOSC1-204ENST00000370902 ANKRD63C9JTQ0 380 aa11.98□□□□□ -0.49
EXOSC1-204ENST00000370902 OGTO15294 1046 aa11.98□□□□□ -0.49
EXOSC1-204ENST00000370902 EXTL3O43909 919 aa11.98□□□□□ -0.49
EXOSC1-204ENST00000370902 NEFLP07196 543 aa11.98□□□□□ -0.49
EXOSC1-204ENST00000370902 EPHB3P54753 998 aa11.98□□□□□ -0.49
EXOSC1-204ENST00000370902 GRIN1Q05586 938 aa11.98□□□□□ -0.49
EXOSC1-204ENST00000370902 LRRC32Q14392 662 aa11.98□□□□□ -0.49
EXOSC1-204ENST00000370902 ARHGAP29Q52LW3 1261 aa11.98□□□□□ -0.49
EXOSC1-204ENST00000370902 PPM1JQ5JR12 505 aa11.98□□□□□ -0.49
EXOSC1-204ENST00000370902 GPR158Q5T848 1215 aa11.98□□□□□ -0.49
EXOSC1-204ENST00000370902 NAIF1Q69YI7 327 aaPredicted RBP11.98□□□□□ -0.49
EXOSC1-204ENST00000370902 SCARA3Q6AZY7 606 aa11.98□□□□□ -0.49
EXOSC1-204ENST00000370902 FSTL4Q6MZW2 842 aa11.98□□□□□ -0.49
EXOSC1-204ENST00000370902 LRRTM3Q86VH5 581 aa11.98□□□□□ -0.49
EXOSC1-204ENST00000370902 EFCAB13Q8IY85 973 aa11.98□□□□□ -0.49
EXOSC1-204ENST00000370902 KCTD17Q8N5Z5 321 aa11.98□□□□□ -0.49
EXOSC1-204ENST00000370902 STKLD1Q8NE28 680 aa11.98□□□□□ -0.49
EXOSC1-204ENST00000370902 CSGALNACT1Q8TDX6 532 aa11.98□□□□□ -0.49
EXOSC1-204ENST00000370902 EZH1Q92800 747 aaPredicted RBP11.98□□□□□ -0.49
EXOSC1-204ENST00000370902 ATXN3LQ9H3M9 355 aa11.98□□□□□ -0.49
EXOSC1-204ENST00000370902 SH2B1Q9NRF2 756 aaPredicted RBP11.98□□□□□ -0.49
EXOSC1-204ENST00000370902 POLR3BQ9NW08 1133 aaPredicted RBP11.98□□□□□ -0.49
EXOSC1-204ENST00000370902 CCL26Q9Y258 94 aa11.98□□□□□ -0.49
EXOSC1-204ENST00000370902 ASB3Q9Y575 518 aa11.98□□□□□ -0.49
EXOSC1-204ENST00000370902 VWA3AA6NCI4 1184 aa11.97□□□□□ -0.49
EXOSC1-204ENST00000370902 HNRNPDLO14979 420 aaKnown RBP11.97□□□□□ -0.49
EXOSC1-204ENST00000370902 PRKCSHP14314 528 aaPredicted RBP11.97□□□□□ -0.49
EXOSC1-204ENST00000370902 HMGA1P17096 107 aaKnown RBP11.97□□□□□ -0.49
EXOSC1-204ENST00000370902 MARCKSP29966 332 aaPredicted RBP11.97□□□□□ -0.49
EXOSC1-204ENST00000370902 CNR2P34972 360 aa11.97□□□□□ -0.49
EXOSC1-204ENST00000370902 RAP1GAPP47736 663 aa11.97□□□□□ -0.49
EXOSC1-204ENST00000370902 GNL2Q13823 731 aaKnown RBP11.97□□□□□ -0.49
EXOSC1-204ENST00000370902 PPP2R5DQ14738 602 aa11.97□□□□□ -0.49
EXOSC1-204ENST00000370902 ZRSR1Q15695 479 aaKnown RBP11.97□□□□□ -0.49
EXOSC1-204ENST00000370902 DGKKQ5KSL6 1271 aa11.97□□□□□ -0.49
EXOSC1-204ENST00000370902 HEATR6Q6AI08 1181 aaKnown RBP11.97□□□□□ -0.49
EXOSC1-204ENST00000370902 C1orf228Q6PIY5 440 aa11.97□□□□□ -0.49
EXOSC1-204ENST00000370902 CRELD2Q6UXH1 353 aaPredicted RBP11.97□□□□□ -0.49
EXOSC1-204ENST00000370902 DSTYKQ6XUX3 929 aa11.97□□□□□ -0.49
EXOSC1-204ENST00000370902 FAM184AQ8NB25 1140 aa11.97□□□□□ -0.49
EXOSC1-204ENST00000370902 BPIFB1Q8TDL5 484 aa11.97□□□□□ -0.49
EXOSC1-204ENST00000370902 ZSCAN31Q96LW9 406 aaPredicted RBP11.97□□□□□ -0.49
EXOSC1-204ENST00000370902 FAM83CQ9BQN1 747 aa11.97□□□□□ -0.49
EXOSC1-204ENST00000370902 SLC46A2Q9BY10 475 aa11.97□□□□□ -0.49
EXOSC1-204ENST00000370902 CCSER1Q9C0I3 900 aa11.97□□□□□ -0.49
EXOSC1-204ENST00000370902 TASP1Q9H6P5 420 aa11.97□□□□□ -0.49
EXOSC1-204ENST00000370902 TMLHEQ9NVH6 421 aa11.97□□□□□ -0.49
EXOSC1-204ENST00000370902 ODF2LQ9ULJ1 636 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms