RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 RBAKQ9NYW8 714 aaPredicted RBP11.87□□□□□ -0.51
EXOSC1-202ENST00000370885 CACNA1IQ9P0X4 2223 aa11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 KPNA7A9QM74 516 aa11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 KLRC4O43908 158 aa11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 EXTL3O43909 919 aa11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 IL18RAPO95256 599 aa11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 ITGB3P05106 788 aa11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 MYL4P12829 197 aa11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 ATF6P18850 670 aa11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 CD72P21854 359 aa11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 VIPR2P41587 438 aa11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 TAF6P49848 677 aa11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 ASIC1P78348 528 aa11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 TFAMQ00059 246 aaKnown RBP11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 TEAD2Q15562 447 aa11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 GAREM2Q75VX8 874 aa11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 USP37Q86T82 979 aa11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 CCDC65Q8IXS2 484 aa11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 CCDC105Q8IYK2 499 aa11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 SYCP3Q8IZU3 236 aa11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 IQUBQ8NA54 791 aa11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 DTWD2Q8NBA8 298 aa11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 STKLD1Q8NE28 680 aa11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 ZNF507Q8TCN5 953 aa11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 SCFD1Q8WVM8 642 aa11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 ZNF512Q96ME7 567 aaPredicted RBP11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 ASB16Q96NS5 453 aa11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 LRRC3BQ96PB8 259 aa11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 PRRX2Q99811 253 aa11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 LPIN3Q9BQK8 851 aa11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 DDX23Q9BUQ8 820 aaKnown RBP11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 GDE1Q9NZC3 331 aa11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 SERTAD1Q9UHV2 236 aa11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 MAFFQ9ULX9 164 aa11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 L1RE1Q9UN81 338 aa11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 AGAP1Q9UPQ3 857 aa11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 EXOC7Q9UPT5 735 aa11.86□□□□□ -0.51
EXOSC1-202ENST00000370885 A0A1W2PRU2 124 aa11.85□□□□□ -0.51
EXOSC1-202ENST00000370885 TULP1O00294 542 aaPredicted RBP11.85□□□□□ -0.51
EXOSC1-202ENST00000370885 CLIC2O15247 247 aa11.85□□□□□ -0.51
EXOSC1-202ENST00000370885 ACTN4O43707 911 aaKnown RBP11.85□□□□□ -0.51
EXOSC1-202ENST00000370885 ECI2O75521 394 aa11.85□□□□□ -0.51
EXOSC1-202ENST00000370885 MICAL2O94851 1124 aa11.85□□□□□ -0.51
EXOSC1-202ENST00000370885 ODC1P11926 461 aa11.85□□□□□ -0.51
EXOSC1-202ENST00000370885 PDIA4P13667 645 aaKnown RBP11.85□□□□□ -0.51
EXOSC1-202ENST00000370885 AFMP43652 599 aa11.85□□□□□ -0.51
EXOSC1-202ENST00000370885 ME1P48163 572 aa11.85□□□□□ -0.51
EXOSC1-202ENST00000370885 GPR15P49685 360 aa11.85□□□□□ -0.51
EXOSC1-202ENST00000370885 NUBP1P53384 320 aa11.85□□□□□ -0.51
EXOSC1-202ENST00000370885 STARD6P59095 220 aa11.85□□□□□ -0.51
EXOSC1-202ENST00000370885 FZD5Q13467 585 aa11.85□□□□□ -0.51
EXOSC1-202ENST00000370885 ALCAMQ13740 583 aa11.85□□□□□ -0.51
EXOSC1-202ENST00000370885 GRM2Q14416 872 aa11.85□□□□□ -0.51
EXOSC1-202ENST00000370885 KLHL40Q2TBA0 621 aa11.85□□□□□ -0.51
EXOSC1-202ENST00000370885 SLC39A12Q504Y0 691 aa11.85□□□□□ -0.51
EXOSC1-202ENST00000370885 SLC44A4Q53GD3 710 aa11.85□□□□□ -0.51
EXOSC1-202ENST00000370885 PHLDB3Q6NSJ2 640 aa11.85□□□□□ -0.51
EXOSC1-202ENST00000370885 ARMCX5Q6P1M9 558 aa11.85□□□□□ -0.51
EXOSC1-202ENST00000370885 VITQ6UXI7 678 aa11.85□□□□□ -0.51
EXOSC1-202ENST00000370885 MTSS1LQ765P7 747 aa11.85□□□□□ -0.51
EXOSC1-202ENST00000370885 PDZD4Q76G19 769 aaPredicted RBP11.85□□□□□ -0.51
EXOSC1-202ENST00000370885 DNAJB7Q7Z6W7 309 aaPredicted RBP11.85□□□□□ -0.51
EXOSC1-202ENST00000370885 GPD1LQ8N335 351 aa11.85□□□□□ -0.51
EXOSC1-202ENST00000370885 PDCL2Q8N4E4 241 aa11.85□□□□□ -0.51
EXOSC1-202ENST00000370885 KCNG4Q8TDN1 519 aa11.85□□□□□ -0.51
EXOSC1-202ENST00000370885 NOC3LQ8WTT2 800 aaKnown RBP11.85□□□□□ -0.51
EXOSC1-202ENST00000370885 ATOH1Q92858 354 aaPredicted RBP11.85□□□□□ -0.51
EXOSC1-202ENST00000370885 PKMYT1Q99640 499 aa11.85□□□□□ -0.51
EXOSC1-202ENST00000370885 MTMR12Q9C0I1 747 aa11.85□□□□□ -0.51
EXOSC1-202ENST00000370885 CUEDC2Q9H467 287 aa11.85□□□□□ -0.51
EXOSC1-202ENST00000370885 IL21Q9HBE4 155 aa11.85□□□□□ -0.51
EXOSC1-202ENST00000370885 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.85□□□□□ -0.51
EXOSC1-202ENST00000370885 STK25O00506 426 aa11.84□□□□□ -0.51
EXOSC1-202ENST00000370885 PRPF40AO75400 957 aaKnown RBP11.84□□□□□ -0.51
EXOSC1-202ENST00000370885 ACAT1P24752 427 aaKnown RBP11.84□□□□□ -0.51
EXOSC1-202ENST00000370885 ANGPT1Q15389 498 aa11.84□□□□□ -0.51
EXOSC1-202ENST00000370885 FAM26FQ5R3K3 315 aa11.84□□□□□ -0.51
EXOSC1-202ENST00000370885 UNC13DQ70J99 1090 aa11.84□□□□□ -0.51
EXOSC1-202ENST00000370885 ASCL5Q7RTU5 278 aa11.84□□□□□ -0.51
EXOSC1-202ENST00000370885 LIMS2Q7Z4I7 341 aa11.84□□□□□ -0.51
EXOSC1-202ENST00000370885 NT5DC4Q86YG4 428 aa11.84□□□□□ -0.51
EXOSC1-202ENST00000370885 NELFCDQ8IXH7 590 aa11.84□□□□□ -0.51
EXOSC1-202ENST00000370885 MAML2Q8IZL2 1156 aaPredicted RBP11.84□□□□□ -0.51
EXOSC1-202ENST00000370885 ZNF687Q8N1G0 1237 aa11.84□□□□□ -0.51
EXOSC1-202ENST00000370885 CSGALNACT2Q8N6G5 542 aa11.84□□□□□ -0.51
EXOSC1-202ENST00000370885 RDH13Q8NBN7 331 aa11.84□□□□□ -0.51
EXOSC1-202ENST00000370885 ZSCAN18Q8TBC5 510 aaPredicted RBP11.84□□□□□ -0.51
EXOSC1-202ENST00000370885 PLEKHO2Q8TD55 490 aa11.84□□□□□ -0.51
EXOSC1-202ENST00000370885 LEO1Q8WVC0 666 aaPredicted RBP11.84□□□□□ -0.51
EXOSC1-202ENST00000370885 ZNF516Q92618 1163 aa11.84□□□□□ -0.51
EXOSC1-202ENST00000370885 ELSPBP1Q96BH3 223 aa11.84□□□□□ -0.51
EXOSC1-202ENST00000370885 OXCT2Q9BYC2 517 aaPredicted RBP11.84□□□□□ -0.51
EXOSC1-202ENST00000370885 TMEM206Q9H813 350 aa11.84□□□□□ -0.51
EXOSC1-202ENST00000370885 SLC39A2Q9NP94 309 aa11.84□□□□□ -0.51
EXOSC1-202ENST00000370885 ASAH2Q9NR71 780 aa11.84□□□□□ -0.51
EXOSC1-202ENST00000370885 AGPAT3Q9NRZ7 376 aa11.84□□□□□ -0.51
EXOSC1-202ENST00000370885 INTS13Q9NVM9 706 aa11.84□□□□□ -0.51
EXOSC1-202ENST00000370885 HSPBP1Q9NZL4 362 aa11.84□□□□□ -0.51
EXOSC1-202ENST00000370885 NME7Q9Y5B8 376 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms