RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 C2orf40Q9H1Z8 148 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 TOMM70O94826 608 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 F2P00734 622 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 TRPC3Q13507 836 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 JADE1Q6IE81 842 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 NLRP14Q86W24 1093 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 SPDYE1Q8NFV5 336 aaPredicted RBP11.33□□□□□ -0.6
TPM3-212ENST00000368533 OLIG1Q8TAK6 271 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 EPS8L1Q8TE68 723 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 WNT8BQ93098 351 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 RPF1Q9H9Y2 349 aaKnown RBP11.33□□□□□ -0.6
TPM3-212ENST00000368533 SNTG2Q9NY99 539 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 STYXL1Q9Y6J8 313 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 MGAMO43451 1857 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 MAGEB2O15479 319 aa11.32□□□□□ -0.6
TPM3-212ENST00000368533 TSPAN1O60635 241 aa11.32□□□□□ -0.6
TPM3-212ENST00000368533 GJB6O95452 261 aa11.32□□□□□ -0.6
TPM3-212ENST00000368533 FGGP02679 453 aa11.32□□□□□ -0.6
TPM3-212ENST00000368533 FTLP02792 175 aaPredicted RBP11.32□□□□□ -0.6
TPM3-212ENST00000368533 ITGB3P05106 788 aa11.32□□□□□ -0.6
TPM3-212ENST00000368533 AKR1A1P14550 325 aa11.32□□□□□ -0.6
TPM3-212ENST00000368533 TM4SF4P48230 202 aa11.32□□□□□ -0.6
TPM3-212ENST00000368533 ZNF211Q13398 564 aaPredicted RBP11.32□□□□□ -0.6
TPM3-212ENST00000368533 AMHR2Q16671 573 aa11.32□□□□□ -0.6
TPM3-212ENST00000368533 TLDC1Q6P9B6 456 aa11.32□□□□□ -0.6
TPM3-212ENST00000368533 ZPBP2Q6X784 338 aa11.32□□□□□ -0.6
TPM3-212ENST00000368533 CCDC121Q6ZUS5 278 aa11.32□□□□□ -0.6
TPM3-212ENST00000368533 BRSK2Q8IWQ3 736 aa11.32□□□□□ -0.6
TPM3-212ENST00000368533 WHAMMQ8TF30 809 aa11.32□□□□□ -0.6
TPM3-212ENST00000368533 SOCS4Q8WXH5 440 aa11.32□□□□□ -0.6
TPM3-212ENST00000368533 EMID1Q96A84 441 aaPredicted RBP11.32□□□□□ -0.6
TPM3-212ENST00000368533 CGRRF1Q99675 332 aa11.32□□□□□ -0.6
TPM3-212ENST00000368533 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.32□□□□□ -0.63e-15■■■□□ 16.8
TPM3-212ENST00000368533 CELF4Q9BZC1 486 aaKnown RBP11.32□□□□□ -0.6
TPM3-212ENST00000368533 YIPF3Q9GZM5 350 aa11.32□□□□□ -0.6
TPM3-212ENST00000368533 EPN3Q9H201 632 aa11.32□□□□□ -0.6
TPM3-212ENST00000368533 CPSF3Q9UKF6 684 aaKnown RBP11.32□□□□□ -0.6
TPM3-212ENST00000368533 PIN4Q9Y237 131 aaKnown RBP11.32□□□□□ -0.6
TPM3-212ENST00000368533 TRIP11Q15643 1979 aa11.32□□□□□ -0.6
TPM3-212ENST00000368533 DAPK3O43293 454 aa11.32□□□□□ -0.6
TPM3-212ENST00000368533 LDHAP00338 332 aaKnown RBP11.32□□□□□ -0.6
TPM3-212ENST00000368533 HOXC6P09630 235 aa11.32□□□□□ -0.6
TPM3-212ENST00000368533 CYP11B1P15538 503 aa11.32□□□□□ -0.6
TPM3-212ENST00000368533 CTNNA1P35221 906 aaKnown RBP11.32□□□□□ -0.6
TPM3-212ENST00000368533 SNRPFP62306 86 aaKnown RBP11.32□□□□□ -0.6
TPM3-212ENST00000368533 SP3Q02447 781 aa11.32□□□□□ -0.6
TPM3-212ENST00000368533 QPCTQ16769 361 aa11.32□□□□□ -0.6
TPM3-212ENST00000368533 TSHZ1Q6ZSZ6 1077 aa11.32□□□□□ -0.6
TPM3-212ENST00000368533 SYCE1Q8N0S2 351 aa11.32□□□□□ -0.6
TPM3-212ENST00000368533 SLC35G2Q8TBE7 412 aa11.32□□□□□ -0.6
TPM3-212ENST00000368533 MICAL1Q8TDZ2 1067 aa11.32□□□□□ -0.6
TPM3-212ENST00000368533 NSMCE1Q8WV22 266 aa11.32□□□□□ -0.6
TPM3-212ENST00000368533 NXF3Q9H4D5 531 aaKnown RBP11.32□□□□□ -0.6
TPM3-212ENST00000368533 SPATS2LQ9NUQ6 558 aaKnown RBP11.32□□□□□ -0.6
TPM3-212ENST00000368533 CPSF2Q9P2I0 782 aaKnown RBP11.32□□□□□ -0.6
TPM3-212ENST00000368533 BUB1BO60566 1050 aaPredicted RBP11.31□□□□□ -0.6
TPM3-212ENST00000368533 PIGRP01833 764 aa11.31□□□□□ -0.6
TPM3-212ENST00000368533 CHRNB2P17787 502 aa11.31□□□□□ -0.6
TPM3-212ENST00000368533 CPT1AP50416 773 aa11.31□□□□□ -0.6
TPM3-212ENST00000368533 MCL1Q07820 350 aa11.31□□□□□ -0.6
TPM3-212ENST00000368533 WDR72Q3MJ13 1102 aa11.31□□□□□ -0.6
TPM3-212ENST00000368533 CCDC26Q8TAB7 109 aa11.31□□□□□ -0.6
TPM3-212ENST00000368533 ZCWPW1Q9H0M4 648 aa11.31□□□□□ -0.6
TPM3-212ENST00000368533 PRMT7Q9NVM4 692 aaPredicted RBP11.31□□□□□ -0.6
TPM3-212ENST00000368533 TTI1O43156 1089 aa11.31□□□□□ -0.6
TPM3-212ENST00000368533 GAS2O43903 313 aaKnown RBP11.31□□□□□ -0.6
TPM3-212ENST00000368533 PRKCIP41743 596 aa11.31□□□□□ -0.6
TPM3-212ENST00000368533 PDE6CP51160 858 aa11.31□□□□□ -0.6
TPM3-212ENST00000368533 PURAQ00577 322 aaKnown RBP11.31□□□□□ -0.6
TPM3-212ENST00000368533 NOGQ13253 232 aa11.31□□□□□ -0.6
TPM3-212ENST00000368533 PTGISQ16647 500 aa11.31□□□□□ -0.6
TPM3-212ENST00000368533 RNF169Q8NCN4 708 aa11.31□□□□□ -0.6
TPM3-212ENST00000368533 SHC3Q92529 594 aa11.31□□□□□ -0.6
TPM3-212ENST00000368533 TACO1Q9BSH4 297 aaKnown RBP11.31□□□□□ -0.6
TPM3-212ENST00000368533 GOLGA2P5Q9HBQ8 144 aa11.31□□□□□ -0.6
TPM3-212ENST00000368533 KIAA1586Q9HCI6 787 aa11.31□□□□□ -0.6
TPM3-212ENST00000368533 PTPRHQ9HD43 1115 aa11.31□□□□□ -0.6
TPM3-212ENST00000368533 CTTNBP2NLQ9P2B4 639 aa11.31□□□□□ -0.6
TPM3-212ENST00000368533 PIK3R2O00459 728 aa11.31□□□□□ -0.6
TPM3-212ENST00000368533 NR1D1P20393 614 aa11.31□□□□□ -0.6
TPM3-212ENST00000368533 FMO1Q01740 532 aa11.31□□□□□ -0.6
TPM3-212ENST00000368533 MFSD14CQ5VZR4 134 aa11.31□□□□□ -0.6
TPM3-212ENST00000368533 MICALCLQ6ZW33 695 aa11.31□□□□□ -0.6
TPM3-212ENST00000368533 IQCKQ8N0W5 287 aa11.31□□□□□ -0.6
TPM3-212ENST00000368533 LINC01465Q8N7H1 131 aa11.31□□□□□ -0.6
TPM3-212ENST00000368533 LRRC57Q8N9N7 239 aa11.31□□□□□ -0.6
TPM3-212ENST00000368533 TRIM7Q9C029 511 aa11.31□□□□□ -0.6
TPM3-212ENST00000368533 RNF39Q9H2S5 420 aa11.31□□□□□ -0.6
TPM3-212ENST00000368533 XPNPEP3Q9NQH7 507 aa11.31□□□□□ -0.6
TPM3-212ENST00000368533 MEIS3P2A8K0S8 358 aa11.3□□□□□ -0.6
TPM3-212ENST00000368533 PPEF2O14830 753 aa11.3□□□□□ -0.6
TPM3-212ENST00000368533 MAPK13O15264 365 aa11.3□□□□□ -0.6
TPM3-212ENST00000368533 MYZAPP0CAP1 466 aa11.3□□□□□ -0.6
TPM3-212ENST00000368533 TNFRSF8P28908 595 aa11.3□□□□□ -0.6
TPM3-212ENST00000368533 IFFO1Q0D2I5 559 aa11.3□□□□□ -0.6
TPM3-212ENST00000368533 CUL2Q13617 745 aa11.3□□□□□ -0.6
TPM3-212ENST00000368533 DUOXA2Q1HG44 320 aa11.3□□□□□ -0.6
TPM3-212ENST00000368533 ZNF699Q32M78 642 aa11.3□□□□□ -0.6
TPM3-212ENST00000368533 SLC10A6Q3KNW5 377 aa11.3□□□□□ -0.6
TPM3-212ENST00000368533 C15orf39Q6ZRI6 1047 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms