RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 RMDN3Q96TC7 470 aa14.6□□□□□ -0.07
SMC5-201ENST00000361138 DHX35Q9H5Z1 703 aaKnown RBP14.6□□□□□ -0.07
SMC5-201ENST00000361138 PIK3CDO00329 1044 aa14.6□□□□□ -0.07
SMC5-201ENST00000361138 PPM1FP49593 454 aaPredicted RBP14.6□□□□□ -0.07
SMC5-201ENST00000361138 SETD3Q86TU7 594 aaPredicted RBP14.6□□□□□ -0.07
SMC5-201ENST00000361138 PIK3R5Q8WYR1 880 aa14.6□□□□□ -0.07
SMC5-201ENST00000361138 BFARQ9NZS9 450 aa14.6□□□□□ -0.07
SMC5-201ENST00000361138 SPATA31D1Q6ZQQ2 1576 aa14.6□□□□□ -0.07
SMC5-201ENST00000361138 PALM3A6NDB9 673 aaPredicted RBP14.6□□□□□ -0.07
SMC5-201ENST00000361138 TMCC1O94876 653 aa14.6□□□□□ -0.07
SMC5-201ENST00000361138 MTM1Q13496 603 aa14.6□□□□□ -0.07
SMC5-201ENST00000361138 QPCTQ16769 361 aa14.6□□□□□ -0.07
SMC5-201ENST00000361138 NDUFAF2Q8N183 169 aa14.6□□□□□ -0.07
SMC5-201ENST00000361138 NLRP4Q96MN2 994 aa14.6□□□□□ -0.07
SMC5-201ENST00000361138 DGKIO75912 1065 aa14.6□□□□□ -0.07
SMC5-201ENST00000361138 EPC2Q52LR7 807 aa14.6□□□□□ -0.07
SMC5-201ENST00000361138 SWSAP1Q6NVH7 229 aa14.6□□□□□ -0.07
SMC5-201ENST00000361138 CAAP1Q9H8G2 361 aa14.6□□□□□ -0.07
SMC5-201ENST00000361138 SAR1AQ9NR31 198 aa14.6□□□□□ -0.07
SMC5-201ENST00000361138 KIAA0391O15091 583 aaKnown RBP14.6□□□□□ -0.07
SMC5-201ENST00000361138 BGNP21810 368 aa14.6□□□□□ -0.07
SMC5-201ENST00000361138 SESN2P58004 480 aaPredicted RBP14.6□□□□□ -0.07
SMC5-201ENST00000361138 ZBTB41Q5SVQ8 909 aa14.6□□□□□ -0.07
SMC5-201ENST00000361138 NINJ2Q9NZG7 142 aa14.6□□□□□ -0.07
SMC5-201ENST00000361138 NUDT2P50583 147 aa14.59□□□□□ -0.07
SMC5-201ENST00000361138 GPSM2P81274 684 aa14.59□□□□□ -0.07
SMC5-201ENST00000361138 PLOD1Q02809 727 aaPredicted RBP14.59□□□□□ -0.07
SMC5-201ENST00000361138 GPR141Q7Z602 305 aa14.59□□□□□ -0.07
SMC5-201ENST00000361138 ADCK1Q86TW2 530 aa14.59□□□□□ -0.07
SMC5-201ENST00000361138 DDHD1Q8NEL9 900 aa14.59□□□□□ -0.07
SMC5-201ENST00000361138 SLC20A1Q8WUM9 679 aa14.59□□□□□ -0.07
SMC5-201ENST00000361138 JADE3Q92613 823 aa14.59□□□□□ -0.07
SMC5-201ENST00000361138 PGBD4Q96DM1 585 aa14.59□□□□□ -0.07
SMC5-201ENST00000361138 FAM53CQ9NYF3 392 aa14.59□□□□□ -0.07
SMC5-201ENST00000361138 NWD1Q149M9 1564 aa14.59□□□□□ -0.07
SMC5-201ENST00000361138 CBX6O95503 412 aa14.59□□□□□ -0.07
SMC5-201ENST00000361138 FAM200BP0CF97 657 aa14.59□□□□□ -0.07
SMC5-201ENST00000361138 PECAM1P16284 738 aaPredicted RBP14.59□□□□□ -0.07
SMC5-201ENST00000361138 PMLP29590 882 aa14.59□□□□□ -0.07
SMC5-201ENST00000361138 MROH9Q5TGP6 573 aa14.59□□□□□ -0.07
SMC5-201ENST00000361138 CKAP2Q8WWK9 683 aa14.59□□□□□ -0.07
SMC5-201ENST00000361138 FSD1LQ9BXM9 530 aa14.59□□□□□ -0.07
SMC5-201ENST00000361138 FRMD8P1Q9BZ68 369 aaPredicted RBP14.59□□□□□ -0.07
SMC5-201ENST00000361138 METTL5Q9NRN9 209 aaKnown RBP14.59□□□□□ -0.07
SMC5-201ENST00000361138 CST8O60676 142 aa14.59□□□□□ -0.07
SMC5-201ENST00000361138 HSPA1AP0DMV8 641 aaKnown RBP14.59□□□□□ -0.07
SMC5-201ENST00000361138 HSPA1BP0DMV9 641 aaKnown RBP14.59□□□□□ -0.07
SMC5-201ENST00000361138 AQP5P55064 265 aa14.59□□□□□ -0.07
SMC5-201ENST00000361138 MAPK6Q16659 721 aa14.59□□□□□ -0.07
SMC5-201ENST00000361138 ZNF568Q3ZCX4 644 aa14.59□□□□□ -0.07
SMC5-201ENST00000361138 ARMCX2Q7L311 632 aa14.59□□□□□ -0.07
SMC5-201ENST00000361138 SPATA18Q8TC71 538 aa14.59□□□□□ -0.07
SMC5-201ENST00000361138 GTPBP10A4D1E9 387 aaKnown RBP14.59□□□□□ -0.07
SMC5-201ENST00000361138 UNC5CO95185 931 aa14.59□□□□□ -0.07
SMC5-201ENST00000361138 LRRC6Q86X45 466 aa14.59□□□□□ -0.07
SMC5-201ENST00000361138 TMPRSS6Q8IU80 811 aa14.59□□□□□ -0.07
SMC5-201ENST00000361138 GZMAP12544 262 aa14.59□□□□□ -0.07
SMC5-201ENST00000361138 COL9A3Q14050 684 aaPredicted RBP14.59□□□□□ -0.07
SMC5-201ENST00000361138 ITPRIPL1Q6GPH6 555 aa14.59□□□□□ -0.07
SMC5-201ENST00000361138 RWDD4Q6NW29 188 aaKnown RBP14.59□□□□□ -0.07
SMC5-201ENST00000361138 PPP1R16BQ96T49 567 aa14.59□□□□□ -0.07
SMC5-201ENST00000361138 RAVER2Q9HCJ3 691 aaKnown RBP14.59□□□□□ -0.07
SMC5-201ENST00000361138 ZNF302Q9NR11 478 aa14.59□□□□□ -0.07
SMC5-201ENST00000361138 STARD13Q9Y3M8 1113 aa14.59□□□□□ -0.07
SMC5-201ENST00000361138 ADGRA3Q8IWK6 1321 aa14.59□□□□□ -0.07
SMC5-201ENST00000361138 BTNL10A8MVZ5 291 aa14.58□□□□□ -0.07
SMC5-201ENST00000361138 PSMC3P17980 439 aa14.58□□□□□ -0.07
SMC5-201ENST00000361138 TNFAIP2Q03169 654 aa14.58□□□□□ -0.07
SMC5-201ENST00000361138 CCNG2Q16589 344 aa14.58□□□□□ -0.07
SMC5-201ENST00000361138 BBS5Q8N3I7 341 aa14.58□□□□□ -0.07
SMC5-201ENST00000361138 ZNF341Q9BYN7 854 aa14.58□□□□□ -0.07
SMC5-201ENST00000361138 DCLK3Q9C098 648 aa14.58□□□□□ -0.07
SMC5-201ENST00000361138 A1CFQ9NQ94 594 aaKnown RBP14.58□□□□□ -0.07
SMC5-201ENST00000361138 WDR35Q9P2L0 1181 aa14.58□□□□□ -0.07
SMC5-201ENST00000361138 AKAP3O75969 853 aa14.58□□□□□ -0.08
SMC5-201ENST00000361138 PSMG1O95456 288 aa14.58□□□□□ -0.08
SMC5-201ENST00000361138 ZNF555Q8NEP9 628 aa14.58□□□□□ -0.08
SMC5-201ENST00000361138 MRPL4Q9BYD3 311 aaKnown RBP14.58□□□□□ -0.08
SMC5-201ENST00000361138 SHCBP1LQ9BZQ2 653 aa14.58□□□□□ -0.08
SMC5-201ENST00000361138 C16orf96A6NNT2 1141 aa14.58□□□□□ -0.08
SMC5-201ENST00000361138 ANGPT2O15123 496 aa14.58□□□□□ -0.08
SMC5-201ENST00000361138 TRPC1P48995 793 aa14.58□□□□□ -0.08
SMC5-201ENST00000361138 SMTNL2Q2TAL5 461 aa14.58□□□□□ -0.08
SMC5-201ENST00000361138 PCNX4Q63HM2 1172 aa14.58□□□□□ -0.08
SMC5-201ENST00000361138 ZNF184Q99676 751 aaPredicted RBP14.58□□□□□ -0.08
SMC5-201ENST00000361138 PNMA3Q9UL41 463 aa14.58□□□□□ -0.08
SMC5-201ENST00000361138 CYP11B1P15538 503 aa14.58□□□□□ -0.08
SMC5-201ENST00000361138 PDAP1Q13442 181 aaKnown RBP14.58□□□□□ -0.08
SMC5-201ENST00000361138 TRADDQ15628 312 aa14.58□□□□□ -0.08
SMC5-201ENST00000361138 DDIASQ8IXT1 998 aa14.58□□□□□ -0.08
SMC5-201ENST00000361138 GDPD5Q8WTR4 605 aa14.58□□□□□ -0.08
SMC5-201ENST00000361138 ACSF2Q96CM8 615 aaPredicted RBP14.58□□□□□ -0.08
SMC5-201ENST00000361138 OXNAD1Q96HP4 312 aaPredicted RBP14.58□□□□□ -0.08
SMC5-201ENST00000361138 PI4K2AQ9BTU6 479 aa14.58□□□□□ -0.08
SMC5-201ENST00000361138 RSAD1Q9HA92 442 aa14.58□□□□□ -0.08
SMC5-201ENST00000361138 PREX1Q8TCU6 1659 aa14.57□□□□□ -0.08
SMC5-201ENST00000361138 DAB1O75553 588 aa14.57□□□□□ -0.08
SMC5-201ENST00000361138 LACTB2Q53H82 288 aaPredicted RBP14.57□□□□□ -0.08
SMC5-201ENST00000361138 E2F8A0AVK6 867 aa14.57□□□□□ -0.08
SMC5-201ENST00000361138 SPDYE16A6NNV3 312 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms