RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 PCSK1P29120 753 aa20.53■□□□□ 0.88
HLA-DRB1-201ENST00000360004 MARSP56192 900 aaKnown RBP20.53■□□□□ 0.88
HLA-DRB1-201ENST00000360004 NOP14P78316 857 aaKnown RBP20.53■□□□□ 0.88
HLA-DRB1-201ENST00000360004 ROR1Q01973 937 aa20.53■□□□□ 0.88
HLA-DRB1-201ENST00000360004 KCNH2Q12809 1159 aa20.53■□□□□ 0.88
HLA-DRB1-201ENST00000360004 ZSCAN23Q3MJ62 389 aa20.53■□□□□ 0.88
HLA-DRB1-201ENST00000360004 CBWD6Q4V339 395 aa20.53■□□□□ 0.88
HLA-DRB1-201ENST00000360004 CBWD3Q5JTY5 395 aa20.53■□□□□ 0.88
HLA-DRB1-201ENST00000360004 CBWD5Q5RIA9 395 aa20.53■□□□□ 0.88
HLA-DRB1-201ENST00000360004 SLC8B1Q6J4K2 584 aa20.53■□□□□ 0.88
HLA-DRB1-201ENST00000360004 DCP1BQ8IZD4 617 aaKnown RBP20.53■□□□□ 0.88
HLA-DRB1-201ENST00000360004 KREMEN2Q8NCW0 462 aa20.53■□□□□ 0.88
HLA-DRB1-201ENST00000360004 SLC22A17Q8WUG5 538 aa20.53■□□□□ 0.88
HLA-DRB1-201ENST00000360004 MED15Q96RN5 788 aa20.53■□□□□ 0.88
HLA-DRB1-201ENST00000360004 APOL5Q9BWW9 433 aa20.53■□□□□ 0.88
HLA-DRB1-201ENST00000360004 DNAI2Q9GZS0 605 aa20.53■□□□□ 0.88
HLA-DRB1-201ENST00000360004 PLEKHA4Q9H4M7 779 aa20.53■□□□□ 0.88
HLA-DRB1-201ENST00000360004 PRDM6Q9NQX0 595 aa20.53■□□□□ 0.88
HLA-DRB1-201ENST00000360004 CD207Q9UJ71 328 aa20.53■□□□□ 0.88
HLA-DRB1-201ENST00000360004 CDH23Q9H251 3354 aa20.52■□□□□ 0.88
HLA-DRB1-201ENST00000360004 BECN2A8MW95 431 aa20.52■□□□□ 0.88
HLA-DRB1-201ENST00000360004 KCNJ18B7U540 433 aa20.52■□□□□ 0.88
HLA-DRB1-201ENST00000360004 TBX10O75333 385 aa20.52■□□□□ 0.88
HLA-DRB1-201ENST00000360004 GLP2RO95838 553 aa20.52■□□□□ 0.88
HLA-DRB1-201ENST00000360004 ASS1P00966 412 aaKnown RBP20.52■□□□□ 0.88
HLA-DRB1-201ENST00000360004 OR4Q2P0C623 313 aa20.52■□□□□ 0.88
HLA-DRB1-201ENST00000360004 CDK11BP21127 795 aaKnown RBP20.52■□□□□ 0.88
HLA-DRB1-201ENST00000360004 KCNJ12Q14500 433 aa20.52■□□□□ 0.88
HLA-DRB1-201ENST00000360004 SOWAHAQ2M3V2 549 aa20.52■□□□□ 0.88
HLA-DRB1-201ENST00000360004 CTC1Q2NKJ3 1217 aa20.52■□□□□ 0.88
HLA-DRB1-201ENST00000360004 SPOPLQ6IQ16 392 aa20.52■□□□□ 0.88
HLA-DRB1-201ENST00000360004 ANKRD54Q6NXT1 300 aa20.52■□□□□ 0.88
HLA-DRB1-201ENST00000360004 RSPO2Q6UXX9 243 aaPredicted RBP20.52■□□□□ 0.88
HLA-DRB1-201ENST00000360004 CCDC149Q6ZUS6 474 aa20.52■□□□□ 0.88
HLA-DRB1-201ENST00000360004 AOPEPQ8N6M6 819 aa20.52■□□□□ 0.88
HLA-DRB1-201ENST00000360004 VN1R2Q8NFZ6 395 aa20.52■□□□□ 0.88
HLA-DRB1-201ENST00000360004 SPATA18Q8TC71 538 aa20.52■□□□□ 0.88
HLA-DRB1-201ENST00000360004 ELMO3Q96BJ8 720 aa20.52■□□□□ 0.88
HLA-DRB1-201ENST00000360004 XYLT2Q9H1B5 865 aa20.52■□□□□ 0.88
HLA-DRB1-201ENST00000360004 VRTNQ9H8Y1 702 aa20.52■□□□□ 0.88
HLA-DRB1-201ENST00000360004 SFXN1Q9H9B4 322 aa20.52■□□□□ 0.88
HLA-DRB1-201ENST00000360004 VWA8A3KMH1 1905 aa20.51■□□□□ 0.87
HLA-DRB1-201ENST00000360004 SMTNL1A8MU46 457 aa20.51■□□□□ 0.87
HLA-DRB1-201ENST00000360004 HOXB8P17481 243 aaPredicted RBP20.51■□□□□ 0.87
HLA-DRB1-201ENST00000360004 ACAT1P24752 427 aaKnown RBP20.51■□□□□ 0.87
HLA-DRB1-201ENST00000360004 EEF1GP26641 437 aaKnown RBP20.51■□□□□ 0.87
HLA-DRB1-201ENST00000360004 GNL1P36915 607 aaPredicted RBP20.51■□□□□ 0.87
HLA-DRB1-201ENST00000360004 SLC39A12Q504Y0 691 aa20.51■□□□□ 0.87
HLA-DRB1-201ENST00000360004 PPM1LQ5SGD2 360 aa20.51■□□□□ 0.87
HLA-DRB1-201ENST00000360004 RARS2Q5T160 578 aaKnown RBP20.51■□□□□ 0.87
HLA-DRB1-201ENST00000360004 TPGS2Q68CL5 300 aa20.51■□□□□ 0.87
HLA-DRB1-201ENST00000360004 CES5AQ6NT32 575 aa20.51■□□□□ 0.87
HLA-DRB1-201ENST00000360004 ZNF461Q8TAF7 563 aa20.51■□□□□ 0.87
HLA-DRB1-201ENST00000360004 PGLYRP2Q96PD5 576 aa20.51■□□□□ 0.87
HLA-DRB1-201ENST00000360004 NIF3L1Q9GZT8 377 aa20.51■□□□□ 0.87
HLA-DRB1-201ENST00000360004 SMYD3Q9H7B4 428 aa20.51■□□□□ 0.87
HLA-DRB1-201ENST00000360004 CYP4F11Q9HBI6 524 aa20.51■□□□□ 0.87
HLA-DRB1-201ENST00000360004 SAMSN1Q9NSI8 373 aaKnown RBP20.51■□□□□ 0.87
HLA-DRB1-201ENST00000360004 FAM50BQ9Y247 325 aa20.51■□□□□ 0.87
HLA-DRB1-201ENST00000360004 WDR27A2RRH5 827 aa20.5■□□□□ 0.87
HLA-DRB1-201ENST00000360004 A8MXQ7 604 aa20.5■□□□□ 0.87
HLA-DRB1-201ENST00000360004 P4HA2O15460 535 aa20.5■□□□□ 0.87
HLA-DRB1-201ENST00000360004 C1RP00736 705 aa20.5■□□□□ 0.87
HLA-DRB1-201ENST00000360004 PDGFRBP09619 1106 aa20.5■□□□□ 0.87
HLA-DRB1-201ENST00000360004 WARSP23381 471 aaKnown RBP20.5■□□□□ 0.87
HLA-DRB1-201ENST00000360004 RAP1GAPP47736 663 aa20.5■□□□□ 0.87
HLA-DRB1-201ENST00000360004 ZNF165P49910 485 aa20.5■□□□□ 0.87
HLA-DRB1-201ENST00000360004 TPM4P67936 248 aa20.5■□□□□ 0.87
HLA-DRB1-201ENST00000360004 DLX2Q07687 328 aaPredicted RBP20.5■□□□□ 0.87
HLA-DRB1-201ENST00000360004 ADCY1Q08828 1119 aa20.5■□□□□ 0.87
HLA-DRB1-201ENST00000360004 LRMPQ12912 555 aa20.5■□□□□ 0.87
HLA-DRB1-201ENST00000360004 MAN2A1Q16706 1144 aa20.5■□□□□ 0.87
HLA-DRB1-201ENST00000360004 TMEM184AQ6ZMB5 413 aa20.5■□□□□ 0.87
HLA-DRB1-201ENST00000360004 OR10T2Q8NGX3 314 aa20.5■□□□□ 0.87
HLA-DRB1-201ENST00000360004 HDAC7Q8WUI4 952 aa20.5■□□□□ 0.87
HLA-DRB1-201ENST00000360004 ACBD6Q9BR61 282 aa20.5■□□□□ 0.87
HLA-DRB1-201ENST00000360004 MRPL45Q9BRJ2 306 aaKnown RBP20.5■□□□□ 0.87
HLA-DRB1-201ENST00000360004 TUBGCP2Q9BSJ2 902 aa20.5■□□□□ 0.87
HLA-DRB1-201ENST00000360004 PIDD1Q9HB75 910 aa20.5■□□□□ 0.87
HLA-DRB1-201ENST00000360004 FANCLQ9NW38 375 aa20.5■□□□□ 0.87
HLA-DRB1-201ENST00000360004 FBXW11Q9UKB1 542 aa20.5■□□□□ 0.87
HLA-DRB1-201ENST00000360004 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.49■□□□□ 0.87
HLA-DRB1-201ENST00000360004 TBC1D4O60343 1298 aa20.49■□□□□ 0.87
HLA-DRB1-201ENST00000360004 TACC1O75410 805 aa20.49■□□□□ 0.87
HLA-DRB1-201ENST00000360004 LRG1P02750 347 aa20.49■□□□□ 0.87
HLA-DRB1-201ENST00000360004 C8AP07357 584 aa20.49■□□□□ 0.87
HLA-DRB1-201ENST00000360004 MCCD1P59942 119 aaPredicted RBP20.49■□□□□ 0.87
HLA-DRB1-201ENST00000360004 TFF2Q03403 129 aa20.49■□□□□ 0.87
HLA-DRB1-201ENST00000360004 GPR17Q13304 367 aa20.49■□□□□ 0.87
HLA-DRB1-201ENST00000360004 COL19A1Q14993 1142 aa20.49■□□□□ 0.87
HLA-DRB1-201ENST00000360004 RNF19BQ6ZMZ0 732 aa20.49■□□□□ 0.87
HLA-DRB1-201ENST00000360004 OSTM1Q86WC4 334 aa20.49■□□□□ 0.87
HLA-DRB1-201ENST00000360004 C12orf76Q8N812 135 aaPredicted RBP20.49■□□□□ 0.87
HLA-DRB1-201ENST00000360004 SLC7A14Q8TBB6 771 aa20.49■□□□□ 0.87
HLA-DRB1-201ENST00000360004 SEMA4DQ92854 862 aa20.49■□□□□ 0.87
HLA-DRB1-201ENST00000360004 NT5C1BQ96P26 610 aa20.49■□□□□ 0.87
HLA-DRB1-201ENST00000360004 TMEM209Q96SK2 561 aa20.49■□□□□ 0.87
HLA-DRB1-201ENST00000360004 SYT15Q9BQS2 421 aa20.49■□□□□ 0.87
HLA-DRB1-201ENST00000360004 ZCWPW1Q9H0M4 648 aa20.49■□□□□ 0.87
HLA-DRB1-201ENST00000360004 CLEC1BQ9P126 229 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms