RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 UBR7Q8N806 425 aa13.28□□□□□ -0.28
NIF3L1-201ENST00000359683 KBTBD7Q8WVZ9 684 aa13.28□□□□□ -0.28
NIF3L1-201ENST00000359683 IQCDQ96DY2 449 aa13.28□□□□□ -0.28
NIF3L1-201ENST00000359683 ARID3AQ99856 593 aa13.28□□□□□ -0.28
NIF3L1-201ENST00000359683 ZNF576Q9H609 170 aa13.28□□□□□ -0.28
NIF3L1-201ENST00000359683 SMYD3Q9H7B4 428 aa13.28□□□□□ -0.28
NIF3L1-201ENST00000359683 CHST7Q9NS84 486 aa13.28□□□□□ -0.28
NIF3L1-201ENST00000359683 AJAP1Q9UKB5 411 aaPredicted RBP13.28□□□□□ -0.28
NIF3L1-201ENST00000359683 DSEQ9UL01 958 aa13.28□□□□□ -0.28
NIF3L1-201ENST00000359683 LZTS1Q9Y250 596 aa13.28□□□□□ -0.28
NIF3L1-201ENST00000359683 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.28□□□□□ -0.28
NIF3L1-201ENST00000359683 FHOD1Q9Y613 1164 aa13.28□□□□□ -0.28
NIF3L1-201ENST00000359683 NLRC5Q86WI3 1866 aa13.27□□□□□ -0.29
NIF3L1-201ENST00000359683 CLSTN1O94985 981 aa13.27□□□□□ -0.29
NIF3L1-201ENST00000359683 SOD2P04179 222 aa13.27□□□□□ -0.29
NIF3L1-201ENST00000359683 TRIM21P19474 475 aaKnown RBP13.27□□□□□ -0.29
NIF3L1-201ENST00000359683 ACO1P21399 889 aaKnown RBP13.27□□□□□ -0.29
NIF3L1-201ENST00000359683 WARSP23381 471 aaKnown RBP13.27□□□□□ -0.29
NIF3L1-201ENST00000359683 TKTP29401 623 aaKnown RBP13.27□□□□□ -0.29
NIF3L1-201ENST00000359683 CDC25BP30305 580 aa13.27□□□□□ -0.29
NIF3L1-201ENST00000359683 POLR2FP61218 127 aaKnown RBP13.27□□□□□ -0.29
NIF3L1-201ENST00000359683 MRPL58Q14197 206 aaKnown RBP13.27□□□□□ -0.29
NIF3L1-201ENST00000359683 USP41Q3LFD5 358 aa13.27□□□□□ -0.29
NIF3L1-201ENST00000359683 SCARA5Q6ZMJ2 495 aa13.27□□□□□ -0.29
NIF3L1-201ENST00000359683 TTC39CQ8N584 583 aa13.27□□□□□ -0.29
NIF3L1-201ENST00000359683 SPPL3Q8TCT6 385 aa13.27□□□□□ -0.29
NIF3L1-201ENST00000359683 MRPL45Q9BRJ2 306 aaKnown RBP13.27□□□□□ -0.29
NIF3L1-201ENST00000359683 HERC2P3Q9BVR0 1158 aa13.27□□□□□ -0.29
NIF3L1-201ENST00000359683 STK33Q9BYT3 514 aa13.27□□□□□ -0.29
NIF3L1-201ENST00000359683 SLC28A3Q9HAS3 691 aa13.27□□□□□ -0.29
NIF3L1-201ENST00000359683 CEP72Q9P209 647 aa13.27□□□□□ -0.29
NIF3L1-201ENST00000359683 CNTN6Q9UQ52 1028 aa13.27□□□□□ -0.29
NIF3L1-201ENST00000359683 TIMM13Q9Y5L4 95 aaPredicted RBP13.27□□□□□ -0.29
NIF3L1-201ENST00000359683 A0A1W2PQJ5 194 aa13.26□□□□□ -0.29
NIF3L1-201ENST00000359683 OAZ2O95190 189 aa13.26□□□□□ -0.29
NIF3L1-201ENST00000359683 RAP1GAPP47736 663 aa13.26□□□□□ -0.29
NIF3L1-201ENST00000359683 LHX1P48742 406 aa13.26□□□□□ -0.29
NIF3L1-201ENST00000359683 YWHAEP62258 255 aaKnown RBP13.26□□□□□ -0.29
NIF3L1-201ENST00000359683 UBE3AQ05086 875 aa13.26□□□□□ -0.29
NIF3L1-201ENST00000359683 INCA1Q0VD86 236 aa13.26□□□□□ -0.29
NIF3L1-201ENST00000359683 TBX2Q13207 712 aaPredicted RBP13.26□□□□□ -0.29
NIF3L1-201ENST00000359683 DRAP1Q14919 205 aaPredicted RBP13.26□□□□□ -0.29
NIF3L1-201ENST00000359683 ARHGAP44Q17R89 818 aa13.26□□□□□ -0.29
NIF3L1-201ENST00000359683 PPP2R2DQ66LE6 453 aa13.26□□□□□ -0.29
NIF3L1-201ENST00000359683 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.26□□□□□ -0.29
NIF3L1-201ENST00000359683 OSTM1Q86WC4 334 aa13.26□□□□□ -0.29
NIF3L1-201ENST00000359683 METTL23Q86XA0 190 aa13.26□□□□□ -0.29
NIF3L1-201ENST00000359683 GPR65Q8IYL9 337 aa13.26□□□□□ -0.29
NIF3L1-201ENST00000359683 ADGRF2Q8IZF7 708 aa13.26□□□□□ -0.29
NIF3L1-201ENST00000359683 SHC3Q92529 594 aa13.26□□□□□ -0.29
NIF3L1-201ENST00000359683 TTPALQ9BTX7 342 aa13.26□□□□□ -0.29
NIF3L1-201ENST00000359683 C11orf84Q9BUA3 381 aaPredicted RBP13.26□□□□□ -0.29
NIF3L1-201ENST00000359683 GPR88Q9GZN0 384 aa13.26□□□□□ -0.29
NIF3L1-201ENST00000359683 NLRC4Q9NPP4 1024 aa13.26□□□□□ -0.29
NIF3L1-201ENST00000359683 CISHQ9NSE2 258 aa13.26□□□□□ -0.29
NIF3L1-201ENST00000359683 PUF60Q9UHX1 559 aaKnown RBP13.26□□□□□ -0.29
NIF3L1-201ENST00000359683 BARX2Q9UMQ3 279 aaPredicted RBP13.26□□□□□ -0.29
NIF3L1-201ENST00000359683 CAPN11Q9UMQ6 739 aa13.26□□□□□ -0.29
NIF3L1-201ENST00000359683 NME7Q9Y5B8 376 aa13.26□□□□□ -0.29
NIF3L1-201ENST00000359683 A0A0C4DFX4 3053 aa13.25□□□□□ -0.29
NIF3L1-201ENST00000359683 H3BNC9 293 aa13.25□□□□□ -0.29
NIF3L1-201ENST00000359683 RNF225M0QZC1 329 aaPredicted RBP13.25□□□□□ -0.29
NIF3L1-201ENST00000359683 FOXN3O00409 490 aaPredicted RBP13.25□□□□□ -0.29
NIF3L1-201ENST00000359683 CILPO75339 1184 aa13.25□□□□□ -0.29
NIF3L1-201ENST00000359683 GYPCP04921 128 aa13.25□□□□□ -0.29
NIF3L1-201ENST00000359683 GNL1P36915 607 aaPredicted RBP13.25□□□□□ -0.29
NIF3L1-201ENST00000359683 JAM2P57087 298 aa13.25□□□□□ -0.29
NIF3L1-201ENST00000359683 DSG1Q02413 1049 aa13.25□□□□□ -0.29
NIF3L1-201ENST00000359683 TRIM14Q14142 442 aa13.25□□□□□ -0.29
NIF3L1-201ENST00000359683 RTP2Q5QGT7 225 aa13.25□□□□□ -0.29
NIF3L1-201ENST00000359683 VARS2Q5ST30 1063 aaKnown RBP13.25□□□□□ -0.29
NIF3L1-201ENST00000359683 KIAA0319Q5VV43 1072 aa13.25□□□□□ -0.29
NIF3L1-201ENST00000359683 TMC6Q7Z403 805 aa13.25□□□□□ -0.29
NIF3L1-201ENST00000359683 UNC93AQ86WB7 457 aa13.25□□□□□ -0.29
NIF3L1-201ENST00000359683 VPS52Q8N1B4 723 aa13.25□□□□□ -0.29
NIF3L1-201ENST00000359683 WHAMMQ8TF30 809 aa13.25□□□□□ -0.29
NIF3L1-201ENST00000359683 BAP1Q92560 729 aa13.25□□□□□ -0.29
NIF3L1-201ENST00000359683 ALG13Q9NP73 1137 aaKnown RBP13.25□□□□□ -0.29
NIF3L1-201ENST00000359683 MTUS1Q9ULD2 1270 aa13.25□□□□□ -0.29
NIF3L1-201ENST00000359683 MYO6Q9UM54 1294 aa13.25□□□□□ -0.29
NIF3L1-201ENST00000359683 VWA8A3KMH1 1905 aa13.25□□□□□ -0.29
NIF3L1-201ENST00000359683 TBC1D4O60343 1298 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 LILRB3O75022 631 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 CTSAP10619 480 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 CD58P19256 250 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 YWHAHQ04917 246 aaPredicted RBP13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 RAPGEF1Q13905 1077 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 OVOS1Q6IE37 1185 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 CACNA2D4Q7Z3S7 1137 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 CEP57Q86XR8 500 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 FAM71AQ8IYT1 594 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 FBXO22Q8NEZ5 403 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 OR6B3Q8NGW1 331 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 LNX1Q8TBB1 728 aaPredicted RBP13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 PIK3R5Q8WYR1 880 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 B3GALT6Q96L58 329 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 RTP3Q9BQQ7 232 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 ZBP1Q9H171 429 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 SNX25Q9H3E2 840 aa13.24□□□□□ -0.29
NIF3L1-201ENST00000359683 DDX43Q9NXZ2 648 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms