RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 ALDH1A3P47895 512 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 KCNJ1P48048 391 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 RTP1P59025 263 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 BEST2Q8NFU1 509 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 MAP3K14Q99558 947 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 NRDE2Q9H7Z3 1164 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 HIVEP2P31629 2446 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 IGSF1Q8N6C5 1336 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 STX7O15400 261 aaKnown RBP6.34□□□□□ -1.39
VPS13B-203ENST00000358544 CLOCKO15516 846 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 SORBS3O60504 671 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 CFBP00751 764 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 ALOX15P16050 662 aaPredicted RBP6.34□□□□□ -1.39
VPS13B-203ENST00000358544 TMEM270Q6UE05 265 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 STRBPQ96SI9 672 aaKnown RBP6.34□□□□□ -1.39
VPS13B-203ENST00000358544 STK33Q9BYT3 514 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 EXOSC4Q9NPD3 245 aaKnown RBP6.34□□□□□ -1.39
VPS13B-203ENST00000358544 PSTPIP1O43586 416 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 OATP04181 439 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 RARAP10276 462 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 CD44P16070 742 aaKnown RBP6.34□□□□□ -1.39
VPS13B-203ENST00000358544 FCHO2Q0JRZ9 810 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 NAALADL2Q58DX5 795 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 GIMAP8Q8ND71 665 aaPredicted RBP6.34□□□□□ -1.39
VPS13B-203ENST00000358544 IVNS1ABPQ9Y6Y0 642 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 POTECB2RU33 542 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 KCNA2P16389 499 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 AQP5P55064 265 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 DNAJC16Q9Y2G8 782 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 V9GYQ6 96 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 SAMD9LQ8IVG5 1584 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 PNMA6FA0A0J9YX94 578 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 SPDYE5A6NIY4 337 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 APOL1O14791 398 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 RASSF9O75901 435 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 ANTXR2P58335 489 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 MYBPC2Q14324 1141 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 POLD3Q15054 466 aaPredicted RBP6.34□□□□□ -1.39
VPS13B-203ENST00000358544 ZBTB8OSQ8IWT0 167 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 NACC1Q96RE7 527 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 TMEM79Q9BSE2 394 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 THRAP3Q9Y2W1 955 aaKnown RBP6.34□□□□□ -1.39
VPS13B-203ENST00000358544 ZGRF1Q86YA3 2104 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 RTN2O75298 545 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 ABCE1P61221 599 aaKnown RBP6.34□□□□□ -1.39
VPS13B-203ENST00000358544 ZNF200P98182 395 aaPredicted RBP6.34□□□□□ -1.39
VPS13B-203ENST00000358544 SMAD1Q15797 465 aaKnown RBP6.34□□□□□ -1.39
VPS13B-203ENST00000358544 TRIM72Q6ZMU5 477 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 FAM162AQ96A26 154 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 SCN2AQ99250 2005 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 E9PBE3 544 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 AREL1O15033 823 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 KLHL41O60662 606 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 CDK7P50613 346 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 PSPC1Q8WXF1 523 aaKnown RBP6.34□□□□□ -1.39
VPS13B-203ENST00000358544 C7orf25Q9BPX7 421 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 EPS8L2Q9H6S3 715 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 WDR35Q9P2L0 1181 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 CEP170Q5SW79 1584 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 ASMTLO95671 621 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 CNPY1Q3B7I2 92 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 SCARA5Q6ZMJ2 495 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 RIPOR1Q6ZS17 1223 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 PCYOX1LQ8NBM8 494 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.34□□□□□ -1.399e-7■■■■■ 70.6
VPS13B-203ENST00000358544 DYNLL2Q96FJ2 89 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 THAP1Q9NVV9 213 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 APEX2Q9UBZ4 518 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 ATP10BO94823 1461 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 THRAP10827 490 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 DGUOKQ16854 277 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 PARP6Q2NL67 630 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 ARMCX4Q5H9R4 360 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 ZFP1Q6P2D0 407 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 MPP6Q9NZW5 540 aa6.34□□□□□ -1.39
VPS13B-203ENST00000358544 SNX2O60749 519 aa6.34□□□□□ -1.4
VPS13B-203ENST00000358544 SKIV2L2P42285 1042 aaKnown RBP6.34□□□□□ -1.4
VPS13B-203ENST00000358544 NPR1P16066 1061 aa6.34□□□□□ -1.4
VPS13B-203ENST00000358544 ZNF23P17027 643 aa6.34□□□□□ -1.4
VPS13B-203ENST00000358544 OSBPP22059 807 aa6.34□□□□□ -1.4
VPS13B-203ENST00000358544 ARHGDIAP52565 204 aa6.34□□□□□ -1.4
VPS13B-203ENST00000358544 LAMC2Q13753 1193 aa6.34□□□□□ -1.4
VPS13B-203ENST00000358544 MEA1Q16626 185 aa6.34□□□□□ -1.4
VPS13B-203ENST00000358544 LMBRD2Q68DH5 695 aaPredicted RBP6.34□□□□□ -1.4
VPS13B-203ENST00000358544 NET1Q7Z628 596 aaPredicted RBP6.34□□□□□ -1.4
VPS13B-203ENST00000358544 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.34□□□□□ -1.4
VPS13B-203ENST00000358544 IL1RL2Q9HB29 575 aa6.34□□□□□ -1.4
VPS13B-203ENST00000358544 SCN3BQ9NY72 215 aa6.34□□□□□ -1.4
VPS13B-203ENST00000358544 STK39Q9UEW8 545 aa6.34□□□□□ -1.4
VPS13B-203ENST00000358544 ZNF609O15014 1411 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 IQSEC2Q5JU85 1478 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 GCLMP48507 274 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 FIGNQ5HY92 759 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 DPP8Q6V1X1 898 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-203ENST00000358544 PLEKHG4BQ96PX9 1271 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 KLHL31Q9H511 634 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 CYP26A1O43174 497 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 C4BPBP20851 252 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 ARHGEF19Q8IW93 802 aa6.33□□□□□ -1.4
VPS13B-203ENST00000358544 MAGED4Q96JG8 741 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms