RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 ACP6Q9NPH0 428 aa28.9■■■□□ 2.22
SSBP4-202ENST00000348495 BZW2Q9Y6E2 419 aaKnown RBP28.9■■■□□ 2.22
SSBP4-202ENST00000348495 GABRDO14764 452 aa28.89■■■□□ 2.22
SSBP4-202ENST00000348495 EFEMP2O95967 443 aa28.89■■■□□ 2.22
SSBP4-202ENST00000348495 PLEKP08567 350 aaPredicted RBP28.89■■■□□ 2.22
SSBP4-202ENST00000348495 ODC1P11926 461 aa28.89■■■□□ 2.22
SSBP4-202ENST00000348495 NDST1P52848 882 aa28.89■■■□□ 2.22
SSBP4-202ENST00000348495 RAD23BP54727 409 aa28.89■■■□□ 2.22
SSBP4-202ENST00000348495 KCNT2Q6UVM3 1135 aa28.89■■■□□ 2.22
SSBP4-202ENST00000348495 CYP26C1Q6V0L0 522 aa28.89■■■□□ 2.22
SSBP4-202ENST00000348495 TMEM86AQ8N2M4 240 aa28.89■■■□□ 2.22
SSBP4-202ENST00000348495 SPATA18Q8TC71 538 aa28.89■■■□□ 2.22
SSBP4-202ENST00000348495 BCL7CQ8WUZ0 217 aaPredicted RBP28.89■■■□□ 2.22
SSBP4-202ENST00000348495 ELOVL4Q9GZR5 314 aa28.89■■■□□ 2.22
SSBP4-202ENST00000348495 HAUS4Q9H6D7 363 aa28.89■■■□□ 2.22
SSBP4-202ENST00000348495 NT5C1B-RDH14C9J2C7 533 aa28.89■■■□□ 2.21
SSBP4-202ENST00000348495 H0YGN5 161 aa28.89■■■□□ 2.21
SSBP4-202ENST00000348495 TRAPPC3O43617 180 aa28.89■■■□□ 2.21
SSBP4-202ENST00000348495 LAG3P18627 525 aa28.89■■■□□ 2.21
SSBP4-202ENST00000348495 PTK2Q05397 1052 aa28.89■■■□□ 2.21
SSBP4-202ENST00000348495 UNC93AQ86WB7 457 aa28.89■■■□□ 2.21
SSBP4-202ENST00000348495 OSTM1Q86WC4 334 aa28.89■■■□□ 2.21
SSBP4-202ENST00000348495 EPS8L1Q8TE68 723 aa28.89■■■□□ 2.21
SSBP4-202ENST00000348495 RNPC3Q96LT9 517 aaKnown RBP28.89■■■□□ 2.21
SSBP4-202ENST00000348495 NOCTQ9UK39 431 aaKnown RBP28.89■■■□□ 2.21
SSBP4-202ENST00000348495 PCDHB8Q9UN66 801 aa28.89■■■□□ 2.21
SSBP4-202ENST00000348495 CYP11B1P15538 503 aa28.88■■■□□ 2.21
SSBP4-202ENST00000348495 TYMPP19971 482 aa28.88■■■□□ 2.21
SSBP4-202ENST00000348495 BPIFB4P59827 614 aa28.88■■■□□ 2.21
SSBP4-202ENST00000348495 MAPK8IP2Q13387 824 aaPredicted RBP28.88■■■□□ 2.21
SSBP4-202ENST00000348495 HS1BP3Q53T59 392 aa28.88■■■□□ 2.21
SSBP4-202ENST00000348495 SLC4A11Q8NBS3 891 aa28.88■■■□□ 2.21
SSBP4-202ENST00000348495 OLIG1Q8TAK6 271 aa28.88■■■□□ 2.21
SSBP4-202ENST00000348495 STXBP5LQ9Y2K9 1186 aa28.88■■■□□ 2.21
SSBP4-202ENST00000348495 KIAA1671Q9BY89 1806 aa28.88■■■□□ 2.21
SSBP4-202ENST00000348495 ARHGEF37A1IGU5 675 aa28.87■■■□□ 2.21
SSBP4-202ENST00000348495 CARNS1A5YM72 827 aa28.87■■■□□ 2.21
SSBP4-202ENST00000348495 TLL1O43897 1013 aa28.87■■■□□ 2.21
SSBP4-202ENST00000348495 PAEPP09466 180 aa28.87■■■□□ 2.21
SSBP4-202ENST00000348495 ZNF394Q53GI3 561 aa28.87■■■□□ 2.21
SSBP4-202ENST00000348495 NOP9Q86U38 636 aaKnown RBP28.87■■■□□ 2.21
SSBP4-202ENST00000348495 FIBCD1Q8N539 461 aa28.87■■■□□ 2.21
SSBP4-202ENST00000348495 COLGALT1Q8NBJ5 622 aa28.87■■■□□ 2.21
SSBP4-202ENST00000348495 OR6B3Q8NGW1 331 aa28.87■■■□□ 2.21
SSBP4-202ENST00000348495 CLP1Q92989 425 aaKnown RBP28.87■■■□□ 2.21
SSBP4-202ENST00000348495 IGSF21Q96ID5 467 aa28.87■■■□□ 2.21
SSBP4-202ENST00000348495 ZNF558Q96NG5 402 aa28.87■■■□□ 2.21
SSBP4-202ENST00000348495 GPR62Q9BZJ7 368 aa28.87■■■□□ 2.21
SSBP4-202ENST00000348495 DSEQ9UL01 958 aa28.87■■■□□ 2.21
SSBP4-202ENST00000348495 TIMM13Q9Y5L4 95 aaPredicted RBP28.87■■■□□ 2.21
SSBP4-202ENST00000348495 SSU72P8A0A1W2PR75 194 aa28.86■■■□□ 2.21
SSBP4-202ENST00000348495 SOWAHDA6NJG2 315 aa28.86■■■□□ 2.21
SSBP4-202ENST00000348495 GNL1P36915 607 aaPredicted RBP28.86■■■□□ 2.21
SSBP4-202ENST00000348495 ASTE1Q2TB18 679 aaPredicted RBP28.86■■■□□ 2.21
SSBP4-202ENST00000348495 SPOUT1Q5T280 376 aaKnown RBP28.86■■■□□ 2.21
SSBP4-202ENST00000348495 FUT10Q6P4F1 479 aa28.86■■■□□ 2.21
SSBP4-202ENST00000348495 ZNF571Q7Z3V5 609 aaPredicted RBP28.86■■■□□ 2.21
SSBP4-202ENST00000348495 SLC39A11Q8N1S5 342 aa28.86■■■□□ 2.21
SSBP4-202ENST00000348495 DDX1Q92499 740 aaKnown RBP28.86■■■□□ 2.21
SSBP4-202ENST00000348495 TMEM176AQ96HP8 235 aa28.86■■■□□ 2.21
SSBP4-202ENST00000348495 NT5C1AQ9BXI3 368 aa28.86■■■□□ 2.21
SSBP4-202ENST00000348495 UBE2OQ9C0C9 1292 aaKnown RBP28.86■■■□□ 2.21
SSBP4-202ENST00000348495 SNX25Q9H3E2 840 aa28.86■■■□□ 2.21
SSBP4-202ENST00000348495 NHEJ1Q9H9Q4 299 aaPredicted RBP28.86■■■□□ 2.21
SSBP4-202ENST00000348495 SF3B1O75533 1304 aaKnown RBP eCLIP28.86■■■□□ 2.214e-6■■■■■ 89
SSBP4-202ENST00000348495 CALCAP01258 141 aa28.86■■■□□ 2.21
SSBP4-202ENST00000348495 LMO2P25791 158 aa28.86■■■□□ 2.21
SSBP4-202ENST00000348495 LHX1P48742 406 aa28.86■■■□□ 2.21
SSBP4-202ENST00000348495 TDRD12Q587J7 1177 aaKnown RBP28.86■■■□□ 2.21
SSBP4-202ENST00000348495 SYN3O14994 580 aa28.85■■■□□ 2.21
SSBP4-202ENST00000348495 HCRTO43612 131 aa28.85■■■□□ 2.21
SSBP4-202ENST00000348495 EIF4A3P38919 411 aaKnown RBP28.85■■■□□ 2.21
SSBP4-202ENST00000348495 PDE6CP51160 858 aa28.85■■■□□ 2.21
SSBP4-202ENST00000348495 ORC1Q13415 861 aa28.85■■■□□ 2.21
SSBP4-202ENST00000348495 RNF168Q8IYW5 571 aaPredicted RBP28.85■■■□□ 2.21
SSBP4-202ENST00000348495 SLC20A1Q8WUM9 679 aa28.85■■■□□ 2.21
SSBP4-202ENST00000348495 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.85■■■□□ 2.21
SSBP4-202ENST00000348495 LCHNA4D1U4 455 aa28.84■■■□□ 2.21
SSBP4-202ENST00000348495 A8MXQ7 604 aa28.84■■■□□ 2.21
SSBP4-202ENST00000348495 GNA15P30679 374 aa28.84■■■□□ 2.21
SSBP4-202ENST00000348495 ELAVL2Q12926 359 aaKnown RBP28.84■■■□□ 2.21
SSBP4-202ENST00000348495 FAM109BQ6ICB4 259 aaPredicted RBP28.84■■■□□ 2.21
SSBP4-202ENST00000348495 RAD9BQ6WBX8 426 aa28.84■■■□□ 2.21
SSBP4-202ENST00000348495 CRYBG2Q8N1P7 616 aa28.84■■■□□ 2.21
SSBP4-202ENST00000348495 RTP3Q9BQQ7 232 aa28.84■■■□□ 2.21
SSBP4-202ENST00000348495 ZSWIM1Q9BR11 485 aa28.84■■■□□ 2.21
SSBP4-202ENST00000348495 VWA8A3KMH1 1905 aa28.83■■■□□ 2.21
SSBP4-202ENST00000348495 ARHGAP6O43182 974 aa28.83■■■□□ 2.21
SSBP4-202ENST00000348495 NRDCO43847 1150 aa28.83■■■□□ 2.21
SSBP4-202ENST00000348495 CHRNB2P17787 502 aa28.83■■■□□ 2.21
SSBP4-202ENST00000348495 FGFR3P22607 806 aa28.83■■■□□ 2.21
SSBP4-202ENST00000348495 TKTP29401 623 aaKnown RBP28.83■■■□□ 2.21
SSBP4-202ENST00000348495 CCDC170Q8IYT3 715 aa28.83■■■□□ 2.21
SSBP4-202ENST00000348495 TFAP2BQ92481 460 aa28.83■■■□□ 2.21
SSBP4-202ENST00000348495 AGPAT1Q99943 283 aa28.83■■■□□ 2.21
SSBP4-202ENST00000348495 VN1R3Q9BXE9 311 aa28.83■■■□□ 2.21
SSBP4-202ENST00000348495 DDX43Q9NXZ2 648 aaKnown RBP28.83■■■□□ 2.21
SSBP4-202ENST00000348495 OAZ2O95190 189 aa28.83■■■□□ 2.21
SSBP4-202ENST00000348495 ANXA13P27216 316 aa28.83■■■□□ 2.21
SSBP4-202ENST00000348495 RABGGTBP53611 331 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms