RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 MRPL45Q9BRJ2 306 aaKnown RBP22.56■■□□□ 1.2
VRK2-201ENST00000340157 MIOSQ9NXC5 875 aa22.56■■□□□ 1.2
VRK2-201ENST00000340157 BARX2Q9UMQ3 279 aaPredicted RBP22.56■■□□□ 1.2
VRK2-201ENST00000340157 SQORQ9Y6N5 450 aa22.56■■□□□ 1.2
VRK2-201ENST00000340157 ZNF623O75123 536 aa22.56■■□□□ 1.2
VRK2-201ENST00000340157 IGFBP6P24592 240 aaPredicted RBP22.56■■□□□ 1.2
VRK2-201ENST00000340157 CDH5P33151 784 aaPredicted RBP22.56■■□□□ 1.2
VRK2-201ENST00000340157 SYCE1Q8N0S2 351 aa22.56■■□□□ 1.2
VRK2-201ENST00000340157 ZNF564Q8TBZ8 553 aaPredicted RBP22.56■■□□□ 1.2
VRK2-201ENST00000340157 C11orf70Q9BRQ4 267 aa22.56■■□□□ 1.2
VRK2-201ENST00000340157 AVENQ9NQS1 362 aaPredicted RBP22.56■■□□□ 1.2
VRK2-201ENST00000340157 EHD2Q9NZN4 543 aa22.56■■□□□ 1.2
VRK2-201ENST00000340157 XPOTO43592 962 aaKnown RBP22.55■■□□□ 1.2
VRK2-201ENST00000340157 CCL5P13501 91 aa22.55■■□□□ 1.2
VRK2-201ENST00000340157 CD19P15391 556 aa22.55■■□□□ 1.2
VRK2-201ENST00000340157 LRPAP1P30533 357 aa22.55■■□□□ 1.2
VRK2-201ENST00000340157 DENND1BQ6P3S1 775 aa22.55■■□□□ 1.2
VRK2-201ENST00000340157 MMS22LQ6ZRQ5 1243 aa22.55■■□□□ 1.2
VRK2-201ENST00000340157 PEX26Q7Z412 305 aa22.55■■□□□ 1.2
VRK2-201ENST00000340157 PHLDB2Q86SQ0 1253 aa22.55■■□□□ 1.2
VRK2-201ENST00000340157 USP38Q8NB14 1042 aa22.55■■□□□ 1.2
VRK2-201ENST00000340157 C1orf131Q8NDD1 294 aaKnown RBP22.55■■□□□ 1.2
VRK2-201ENST00000340157 BTBD6Q96KE9 485 aa22.55■■□□□ 1.2
VRK2-201ENST00000340157 ADAM2Q99965 735 aa22.55■■□□□ 1.2
VRK2-201ENST00000340157 FAM124BQ9H5Z6 455 aaPredicted RBP22.55■■□□□ 1.2
VRK2-201ENST00000340157 SMARCAL1Q9NZC9 954 aa22.55■■□□□ 1.2
VRK2-201ENST00000340157 UVRAGQ9P2Y5 699 aa22.55■■□□□ 1.2
VRK2-201ENST00000340157 CACNG4Q9UBN1 327 aa22.55■■□□□ 1.2
VRK2-201ENST00000340157 A0A0U1RQF3 1178 aa22.54■■□□□ 1.2
VRK2-201ENST00000340157 ARL5CA6NH57 179 aa22.54■■□□□ 1.2
VRK2-201ENST00000340157 LSM8O95777 96 aaKnown RBP22.54■■□□□ 1.2
VRK2-201ENST00000340157 SOWAHAQ2M3V2 549 aa22.54■■□□□ 1.2
VRK2-201ENST00000340157 C11orf63Q6NUN7 778 aa22.54■■□□□ 1.2
VRK2-201ENST00000340157 FAM126BQ8IXS8 530 aa22.54■■□□□ 1.2
VRK2-201ENST00000340157 HES6Q96HZ4 224 aa22.54■■□□□ 1.2
VRK2-201ENST00000340157 OGDHLQ9ULD0 1010 aa22.54■■□□□ 1.2
VRK2-201ENST00000340157 GIT1Q9Y2X7 761 aa22.54■■□□□ 1.2
VRK2-201ENST00000340157 HSPA6P17066 643 aa22.54■■□□□ 1.2
VRK2-201ENST00000340157 MMP8P22894 467 aa22.54■■□□□ 1.2
VRK2-201ENST00000340157 RPS6KA1Q15418 735 aa22.54■■□□□ 1.2
VRK2-201ENST00000340157 CPNE8Q86YQ8 564 aa22.54■■□□□ 1.2
VRK2-201ENST00000340157 TRIM7Q9C029 511 aa22.54■■□□□ 1.2
VRK2-201ENST00000340157 GDAP2Q9NXN4 497 aa22.54■■□□□ 1.2
VRK2-201ENST00000340157 ADAM22Q9P0K1 906 aa22.54■■□□□ 1.2
VRK2-201ENST00000340157 CTAGE15A4D2H0 777 aa22.53■■□□□ 1.2
VRK2-201ENST00000340157 KPNA7A9QM74 516 aa22.53■■□□□ 1.2
VRK2-201ENST00000340157 CTAGE8P0CG41 777 aa22.53■■□□□ 1.2
VRK2-201ENST00000340157 MYBL1P10243 752 aa22.53■■□□□ 1.2
VRK2-201ENST00000340157 RAB27AP51159 221 aa22.53■■□□□ 1.2
VRK2-201ENST00000340157 C1QBPQ07021 282 aaKnown RBP22.53■■□□□ 1.2
VRK2-201ENST00000340157 LIMS2Q7Z4I7 341 aa22.53■■□□□ 1.2
VRK2-201ENST00000340157 CTAGE6Q86UF2 777 aa22.53■■□□□ 1.2
VRK2-201ENST00000340157 CTAGE4Q8IX94 777 aa22.53■■□□□ 1.2
VRK2-201ENST00000340157 HACE1Q8IYU2 909 aa22.53■■□□□ 1.2
VRK2-201ENST00000340157 MS4A14Q96JA4 679 aa22.53■■□□□ 1.2
VRK2-201ENST00000340157 VCPIP1Q96JH7 1222 aa22.53■■□□□ 1.2
VRK2-201ENST00000340157 ZNF560Q96MR9 790 aa22.53■■□□□ 1.2
VRK2-201ENST00000340157 RNF208Q9H0X6 261 aa22.53■■□□□ 1.2
VRK2-201ENST00000340157 CYTH4Q9UIA0 394 aa22.53■■□□□ 1.2
VRK2-201ENST00000340157 ALG6Q9Y672 507 aa22.53■■□□□ 1.2
VRK2-201ENST00000340157 TEX35Q5T0J7 233 aa22.52■■□□□ 1.2
VRK2-201ENST00000340157 ZNF572Q7Z3I7 529 aaPredicted RBP22.52■■□□□ 1.2
VRK2-201ENST00000340157 RTN4RL1Q86UN2 441 aaPredicted RBP22.52■■□□□ 1.2
VRK2-201ENST00000340157 NOA1Q8NC60 698 aaKnown RBP22.52■■□□□ 1.2
VRK2-201ENST00000340157 TMEM35BQ8NCS4 154 aa22.52■■□□□ 1.2
VRK2-201ENST00000340157 KBTBD7Q8WVZ9 684 aa22.52■■□□□ 1.2
VRK2-201ENST00000340157 LINC01599Q8WXQ3 324 aa22.52■■□□□ 1.2
VRK2-201ENST00000340157 TRIM11Q96F44 468 aa22.52■■□□□ 1.2
VRK2-201ENST00000340157 CALR3Q96L12 384 aaKnown RBP22.52■■□□□ 1.2
VRK2-201ENST00000340157 EPC1Q9H2F5 836 aa22.52■■□□□ 1.2
VRK2-201ENST00000340157 AMFRQ9UKV5 643 aa22.52■■□□□ 1.2
VRK2-201ENST00000340157 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.52■■□□□ 1.2
VRK2-201ENST00000340157 O00370 1275 aa22.51■■□□□ 1.19
VRK2-201ENST00000340157 DDX3YO15523 660 aaKnown RBP22.51■■□□□ 1.19
VRK2-201ENST00000340157 HCRTO43612 131 aa22.51■■□□□ 1.19
VRK2-201ENST00000340157 PNPLA4P41247 253 aa22.51■■□□□ 1.19
VRK2-201ENST00000340157 TAF6P49848 677 aa22.51■■□□□ 1.19
VRK2-201ENST00000340157 SCNN1GP51170 649 aa22.51■■□□□ 1.19
VRK2-201ENST00000340157 LILRA4P59901 499 aa22.51■■□□□ 1.19
VRK2-201ENST00000340157 MESDQ14696 234 aa22.51■■□□□ 1.19
VRK2-201ENST00000340157 ZNF598Q86UK7 904 aaKnown RBP22.51■■□□□ 1.19
VRK2-201ENST00000340157 TTC39CQ8N584 583 aa22.51■■□□□ 1.19
VRK2-201ENST00000340157 ANKRD7Q92527 254 aa22.51■■□□□ 1.19
VRK2-201ENST00000340157 UBXN4Q92575 508 aa22.51■■□□□ 1.19
VRK2-201ENST00000340157 GOLGA1Q92805 767 aa22.51■■□□□ 1.19
VRK2-201ENST00000340157 NT5C1AQ9BXI3 368 aa22.51■■□□□ 1.19
VRK2-201ENST00000340157 ZNF518BQ9C0D4 1074 aa22.51■■□□□ 1.19
VRK2-201ENST00000340157 LHX5Q9H2C1 402 aa22.51■■□□□ 1.19
VRK2-201ENST00000340157 MED7O43513 233 aa22.51■■□□□ 1.19
VRK2-201ENST00000340157 FGFR1P11362 822 aa22.51■■□□□ 1.19
VRK2-201ENST00000340157 VDRP11473 427 aa22.51■■□□□ 1.19
VRK2-201ENST00000340157 CKAP4Q07065 602 aaKnown RBP22.51■■□□□ 1.19
VRK2-201ENST00000340157 GPNMBQ14956 572 aa22.51■■□□□ 1.19
VRK2-201ENST00000340157 PLEKHA7Q6IQ23 1121 aa22.51■■□□□ 1.19
VRK2-201ENST00000340157 HEXIM2Q96MH2 286 aaKnown RBP22.51■■□□□ 1.19
VRK2-201ENST00000340157 RPS6KC1Q96S38 1066 aa22.51■■□□□ 1.19
VRK2-201ENST00000340157 TSPYL2Q9H2G4 693 aaPredicted RBP22.51■■□□□ 1.19
VRK2-201ENST00000340157 TET1Q8NFU7 2136 aa22.51■■□□□ 1.19
VRK2-201ENST00000340157 TCRBV5S1A1TA0A578 114 aa22.5■■□□□ 1.19
VRK2-201ENST00000340157 TMEM110-MUSTN1A8MSY1 372 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms