RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 TFRCP02786 760 aaKnown RBP11.96□□□□□ -0.49
COL4A5-201ENST00000328300 ESRRAP11474 423 aaPredicted RBP11.96□□□□□ -0.49
COL4A5-201ENST00000328300 GRIN1Q05586 938 aa11.96□□□□□ -0.49
COL4A5-201ENST00000328300 TIGD7Q6NT04 549 aaPredicted RBP11.96□□□□□ -0.49
COL4A5-201ENST00000328300 PPM1NQ8N819 430 aa11.96□□□□□ -0.49
COL4A5-201ENST00000328300 RAPGEF5Q92565 580 aa11.96□□□□□ -0.49
COL4A5-201ENST00000328300 ZSWIM1Q9BR11 485 aa11.96□□□□□ -0.49
COL4A5-201ENST00000328300 TMEM117Q9H0C3 514 aa11.96□□□□□ -0.49
COL4A5-201ENST00000328300 PHLPP1O60346 1717 aa11.96□□□□□ -0.49
COL4A5-201ENST00000328300 PIK3R2O00459 728 aa11.96□□□□□ -0.49
COL4A5-201ENST00000328300 KCNN4O15554 427 aa11.96□□□□□ -0.49
COL4A5-201ENST00000328300 PAEPP09466 180 aa11.96□□□□□ -0.49
COL4A5-201ENST00000328300 SLC11A2P49281 568 aa11.96□□□□□ -0.49
COL4A5-201ENST00000328300 ZNF280DQ6N043 979 aa11.96□□□□□ -0.49
COL4A5-201ENST00000328300 MAP4K3Q8IVH8 894 aa11.96□□□□□ -0.49
COL4A5-201ENST00000328300 USP38Q8NB14 1042 aa11.96□□□□□ -0.49
COL4A5-201ENST00000328300 CCDC124Q96CT7 223 aaKnown RBP11.96□□□□□ -0.49
COL4A5-201ENST00000328300 KCNMB3Q9NPA1 279 aa11.96□□□□□ -0.49
COL4A5-201ENST00000328300 UBIAD1Q9Y5Z9 338 aa11.96□□□□□ -0.49
COL4A5-201ENST00000328300 ALG6Q9Y672 507 aa11.96□□□□□ -0.49
COL4A5-201ENST00000328300 DUOX1Q9NRD9 1551 aa11.96□□□□□ -0.49
COL4A5-201ENST00000328300 MYO1DO94832 1006 aa11.96□□□□□ -0.5
COL4A5-201ENST00000328300 THP07101 528 aa11.96□□□□□ -0.5
COL4A5-201ENST00000328300 COMTP21964 271 aa11.96□□□□□ -0.5
COL4A5-201ENST00000328300 YWHAHQ04917 246 aaPredicted RBP11.96□□□□□ -0.5
COL4A5-201ENST00000328300 C1QBPQ07021 282 aaKnown RBP11.96□□□□□ -0.5
COL4A5-201ENST00000328300 ANKRD23Q86SG2 305 aa11.96□□□□□ -0.5
COL4A5-201ENST00000328300 ZNF512Q96ME7 567 aaPredicted RBP11.96□□□□□ -0.5
COL4A5-201ENST00000328300 TBCBQ99426 244 aa11.96□□□□□ -0.5
COL4A5-201ENST00000328300 P2RX7Q99572 595 aaKnown RBP11.96□□□□□ -0.5
COL4A5-201ENST00000328300 TRIM4Q9C037 500 aa11.96□□□□□ -0.5
COL4A5-201ENST00000328300 STARD7Q9NQZ5 370 aa11.96□□□□□ -0.5
COL4A5-201ENST00000328300 SPATS2LQ9NUQ6 558 aaKnown RBP11.96□□□□□ -0.5
COL4A5-201ENST00000328300 SPECC1L-ADORA2AF8WAN1 911 aa11.96□□□□□ -0.5
COL4A5-201ENST00000328300 ZNF197O14709 1029 aa11.96□□□□□ -0.5
COL4A5-201ENST00000328300 CCDC22O60826 627 aa11.96□□□□□ -0.5
COL4A5-201ENST00000328300 RABGAP1LQ5R372 815 aa11.96□□□□□ -0.5
COL4A5-201ENST00000328300 C11orf63Q6NUN7 778 aa11.96□□□□□ -0.5
COL4A5-201ENST00000328300 RAD9BQ6WBX8 426 aa11.96□□□□□ -0.5
COL4A5-201ENST00000328300 C1orf54Q8WWF1 131 aa11.96□□□□□ -0.5
COL4A5-201ENST00000328300 BRD8Q9H0E9 1235 aa11.96□□□□□ -0.5
COL4A5-201ENST00000328300 NAGPAQ9UK23 515 aa11.96□□□□□ -0.5
COL4A5-201ENST00000328300 LRRC37A3O60309 1634 aa11.96□□□□□ -0.5
COL4A5-201ENST00000328300 CES2O00748 559 aa11.95□□□□□ -0.5
COL4A5-201ENST00000328300 CHUKO15111 745 aa11.95□□□□□ -0.5
COL4A5-201ENST00000328300 NVLO15381 856 aaKnown RBP11.95□□□□□ -0.5
COL4A5-201ENST00000328300 MYCP01106 439 aaPredicted RBP11.95□□□□□ -0.5
COL4A5-201ENST00000328300 IFT88Q13099 833 aa11.95□□□□□ -0.5
COL4A5-201ENST00000328300 GTF2H3Q13889 308 aa11.95□□□□□ -0.5
COL4A5-201ENST00000328300 COBLL1Q53SF7 1204 aa11.95□□□□□ -0.5
COL4A5-201ENST00000328300 EFL1Q7Z2Z2 1120 aaKnown RBP11.95□□□□□ -0.5
COL4A5-201ENST00000328300 TBC1D1Q86TI0 1168 aaPredicted RBP11.95□□□□□ -0.5
COL4A5-201ENST00000328300 SEMA6BQ9H3T3 888 aa11.95□□□□□ -0.5
COL4A5-201ENST00000328300 SATB1Q01826 763 aa11.95□□□□□ -0.5
COL4A5-201ENST00000328300 MFSD10Q14728 455 aa11.95□□□□□ -0.5
COL4A5-201ENST00000328300 NUGGCQ68CJ6 796 aa11.95□□□□□ -0.5
COL4A5-201ENST00000328300 SPDYE1Q8NFV5 336 aaPredicted RBP11.95□□□□□ -0.5
COL4A5-201ENST00000328300 APBB2Q92870 758 aa11.95□□□□□ -0.5
COL4A5-201ENST00000328300 SGSM3Q96HU1 749 aa11.95□□□□□ -0.5
COL4A5-201ENST00000328300 UROC1Q96N76 676 aa11.95□□□□□ -0.5
COL4A5-201ENST00000328300 MAGED2Q9UNF1 606 aaPredicted RBP11.95□□□□□ -0.5
COL4A5-201ENST00000328300 ADCY3O60266 1144 aa11.95□□□□□ -0.5
COL4A5-201ENST00000328300 SLITRK3O94933 977 aa11.95□□□□□ -0.5
COL4A5-201ENST00000328300 HSPA9P38646 679 aaKnown RBP11.95□□□□□ -0.5
COL4A5-201ENST00000328300 PHEXP78562 749 aa11.95□□□□□ -0.5
COL4A5-201ENST00000328300 ZKSCAN8Q15776 578 aaPredicted RBP11.95□□□□□ -0.5
COL4A5-201ENST00000328300 HSP90AA5PQ58FG0 334 aa11.95□□□□□ -0.5
COL4A5-201ENST00000328300 TTC19Q6DKK2 380 aaPredicted RBP11.95□□□□□ -0.5
COL4A5-201ENST00000328300 VSIG10LQ86VR7 867 aa11.95□□□□□ -0.5
COL4A5-201ENST00000328300 BRSK2Q8IWQ3 736 aa11.95□□□□□ -0.5
COL4A5-201ENST00000328300 DCUN1D1Q96GG9 259 aa11.95□□□□□ -0.5
COL4A5-201ENST00000328300 VPS11Q9H270 941 aa11.95□□□□□ -0.5
COL4A5-201ENST00000328300 TRPV2Q9Y5S1 764 aa11.95□□□□□ -0.5
COL4A5-201ENST00000328300 NCAM2O15394 837 aa11.95□□□□□ -0.5
COL4A5-201ENST00000328300 LRG1P02750 347 aa11.95□□□□□ -0.5
COL4A5-201ENST00000328300 PLPPR4Q7Z2D5 763 aa11.95□□□□□ -0.5
COL4A5-201ENST00000328300 PPIL6Q8IXY8 311 aa11.95□□□□□ -0.5
COL4A5-201ENST00000328300 TPCN2Q8NHX9 752 aa11.95□□□□□ -0.5
COL4A5-201ENST00000328300 PNMA5Q96PV4 448 aa11.95□□□□□ -0.5
COL4A5-201ENST00000328300 ISCUQ9H1K1 167 aa11.95□□□□□ -0.5
COL4A5-201ENST00000328300 PSMC3IPQ9P2W1 217 aaPredicted RBP11.95□□□□□ -0.5
COL4A5-201ENST00000328300 UMODL1Q5DID0 1318 aa11.95□□□□□ -0.5
COL4A5-201ENST00000328300 BAG2O95816 211 aa11.95□□□□□ -0.5
COL4A5-201ENST00000328300 PGK2P07205 417 aa11.95□□□□□ -0.5
COL4A5-201ENST00000328300 OXCT1P55809 520 aa11.95□□□□□ -0.5
COL4A5-201ENST00000328300 BST2Q10589 180 aaKnown RBP11.95□□□□□ -0.5
COL4A5-201ENST00000328300 RASIP1Q5U651 963 aa11.95□□□□□ -0.5
COL4A5-201ENST00000328300 SLC30A10Q6XR72 485 aa11.95□□□□□ -0.5
COL4A5-201ENST00000328300 ADGRF2Q8IZF7 708 aa11.95□□□□□ -0.5
COL4A5-201ENST00000328300 OLA1Q9NTK5 396 aaKnown RBP11.95□□□□□ -0.5
COL4A5-201ENST00000328300 DNAJC17Q9NVM6 304 aaKnown RBP11.95□□□□□ -0.5
COL4A5-201ENST00000328300 FRMD3A2A2Y4 597 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 BRAFP15056 766 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 CLCN3P51790 818 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 GEMP55040 296 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 RCN2Q14257 317 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 CBWD2Q8IUF1 395 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 ULK4Q96C45 1275 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 RMDN1Q96DB5 314 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 SEPT5Q99719 369 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms