RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 HERPUD2Q9BSE4 406 aa16.46■□□□□ 0.23
SHROOM1-201ENST00000319854 MTMR12Q9C0I1 747 aa16.46■□□□□ 0.23
SHROOM1-201ENST00000319854 GINM1Q9NU53 330 aa16.46■□□□□ 0.23
SHROOM1-201ENST00000319854 CTNNAL1Q9UBT7 734 aa16.46■□□□□ 0.23
SHROOM1-201ENST00000319854 PRKAG3Q9UGI9 489 aa16.46■□□□□ 0.23
SHROOM1-201ENST00000319854 PI4K2BG5E9Z4 385 aa16.46■□□□□ 0.22
SHROOM1-201ENST00000319854 PHF2O75151 1096 aa16.46■□□□□ 0.22
SHROOM1-201ENST00000319854 WEE2P0C1S8 567 aa16.46■□□□□ 0.22
SHROOM1-201ENST00000319854 GARTP22102 1010 aa16.46■□□□□ 0.22
SHROOM1-201ENST00000319854 GNA15P30679 374 aa16.46■□□□□ 0.22
SHROOM1-201ENST00000319854 OAZ1P54368 228 aa16.46■□□□□ 0.22
SHROOM1-201ENST00000319854 ATP11AP98196 1134 aa16.46■□□□□ 0.22
SHROOM1-201ENST00000319854 TFAMQ00059 246 aaKnown RBP16.46■□□□□ 0.22
SHROOM1-201ENST00000319854 RHPN2Q8IUC4 686 aa16.46■□□□□ 0.22
SHROOM1-201ENST00000319854 SULF1Q8IWU6 871 aa16.46■□□□□ 0.22
SHROOM1-201ENST00000319854 FBXO16Q8IX29 292 aaPredicted RBP16.46■□□□□ 0.22
SHROOM1-201ENST00000319854 PWWP2AQ96N64 755 aa16.46■□□□□ 0.22
SHROOM1-201ENST00000319854 SYT15Q9BQS2 421 aa16.46■□□□□ 0.22
SHROOM1-201ENST00000319854 DDX23Q9BUQ8 820 aaKnown RBP16.46■□□□□ 0.22
SHROOM1-201ENST00000319854 C17orf75Q9HAS0 396 aa16.46■□□□□ 0.22
SHROOM1-201ENST00000319854 FARP2O94887 1054 aaPredicted RBP16.45■□□□□ 0.22
SHROOM1-201ENST00000319854 GNAT1P11488 350 aa16.45■□□□□ 0.22
SHROOM1-201ENST00000319854 LACTBP83111 547 aaPredicted RBP16.45■□□□□ 0.22
SHROOM1-201ENST00000319854 RBBP5Q15291 538 aaKnown RBP16.45■□□□□ 0.22
SHROOM1-201ENST00000319854 ZACNQ401N2 412 aa16.45■□□□□ 0.22
SHROOM1-201ENST00000319854 SGO2Q562F6 1265 aa16.45■□□□□ 0.22
SHROOM1-201ENST00000319854 DPH6Q7L8W6 267 aa16.45■□□□□ 0.22
SHROOM1-201ENST00000319854 SPATA21Q7Z572 469 aa16.45■□□□□ 0.22
SHROOM1-201ENST00000319854 C12orf42Q96LP6 360 aa16.45■□□□□ 0.22
SHROOM1-201ENST00000319854 SPATC1LQ9H0A9 340 aa16.45■□□□□ 0.22
SHROOM1-201ENST00000319854 ZCWPW1Q9H0M4 648 aa16.45■□□□□ 0.22
SHROOM1-201ENST00000319854 ETNK1Q9HBU6 452 aa16.45■□□□□ 0.22
SHROOM1-201ENST00000319854 RXFP1Q9HBX9 757 aa16.45■□□□□ 0.22
SHROOM1-201ENST00000319854 CHST7Q9NS84 486 aa16.45■□□□□ 0.22
SHROOM1-201ENST00000319854 ASIC3Q9UHC3 531 aa16.45■□□□□ 0.22
SHROOM1-201ENST00000319854 MAPK13O15264 365 aa16.45■□□□□ 0.22
SHROOM1-201ENST00000319854 NOP14P78316 857 aaKnown RBP16.45■□□□□ 0.22
SHROOM1-201ENST00000319854 ATP13A4Q4VNC1 1196 aa16.45■□□□□ 0.22
SHROOM1-201ENST00000319854 FAM182AQ5T1J6 154 aa16.45■□□□□ 0.22
SHROOM1-201ENST00000319854 PPP1R13LQ8WUF5 828 aa16.45■□□□□ 0.22
SHROOM1-201ENST00000319854 MTUS1Q9ULD2 1270 aa16.45■□□□□ 0.22
SHROOM1-201ENST00000319854 PCDHA3Q9Y5H8 950 aa16.45■□□□□ 0.22
SHROOM1-201ENST00000319854 CYP1A2P05177 515 aa16.44■□□□□ 0.22
SHROOM1-201ENST00000319854 SNRPFP62306 86 aaKnown RBP16.44■□□□□ 0.22
SHROOM1-201ENST00000319854 ADCY1Q08828 1119 aa16.44■□□□□ 0.22
SHROOM1-201ENST00000319854 NCOA4Q13772 614 aa16.44■□□□□ 0.22
SHROOM1-201ENST00000319854 SLC30A9Q6PML9 568 aa16.44■□□□□ 0.22
SHROOM1-201ENST00000319854 MCOLN2Q8IZK6 566 aa16.44■□□□□ 0.22
SHROOM1-201ENST00000319854 WNT8AQ9H1J5 351 aa16.44■□□□□ 0.22
SHROOM1-201ENST00000319854 DHX33Q9H6R0 707 aaKnown RBP16.44■□□□□ 0.22
SHROOM1-201ENST00000319854 TXNRD2Q9NNW7 524 aa16.44■□□□□ 0.22
SHROOM1-201ENST00000319854 RASAL2Q9UJF2 1139 aa16.44■□□□□ 0.22
SHROOM1-201ENST00000319854 ARL2BPQ9Y2Y0 163 aa16.44■□□□□ 0.22
SHROOM1-201ENST00000319854 MAFBQ9Y5Q3 323 aaPredicted RBP16.44■□□□□ 0.22
SHROOM1-201ENST00000319854 INO80B-WBP1J3KQ70 363 aa16.44■□□□□ 0.22
SHROOM1-201ENST00000319854 C4BPAP04003 597 aaKnown RBP16.44■□□□□ 0.22
SHROOM1-201ENST00000319854 KRT19P08727 400 aa16.44■□□□□ 0.22
SHROOM1-201ENST00000319854 CUL2Q13617 745 aa16.44■□□□□ 0.22
SHROOM1-201ENST00000319854 NBPF20Q3BBV1 942 aa16.44■□□□□ 0.22
SHROOM1-201ENST00000319854 LBX2Q6XYB7 198 aa16.44■□□□□ 0.22
SHROOM1-201ENST00000319854 ECHDC2Q86YB7 292 aa16.44■□□□□ 0.22
SHROOM1-201ENST00000319854 RBBP8NLQ8NC74 664 aaPredicted RBP16.44■□□□□ 0.22
SHROOM1-201ENST00000319854 INO80BQ9C086 356 aaPredicted RBP16.44■□□□□ 0.22
SHROOM1-201ENST00000319854 PAPOLBQ9NRJ5 636 aaKnown RBP16.44■□□□□ 0.22
SHROOM1-201ENST00000319854 NXF1Q9UBU9 619 aaKnown RBP16.44■□□□□ 0.22
SHROOM1-201ENST00000319854 LRRC42Q9Y546 428 aa16.44■□□□□ 0.22
SHROOM1-201ENST00000319854 PCDHB2Q9Y5E7 798 aa16.44■□□□□ 0.22
SHROOM1-201ENST00000319854 NFASCO94856 1347 aa16.44■□□□□ 0.22
SHROOM1-201ENST00000319854 AHCYL1O43865 530 aa16.44■□□□□ 0.22
SHROOM1-201ENST00000319854 PAPOLAP51003 745 aaKnown RBP16.44■□□□□ 0.22
SHROOM1-201ENST00000319854 Q3C1V9 767 aa16.44■□□□□ 0.22
SHROOM1-201ENST00000319854 ARHGEF2Q92974 986 aaKnown RBP16.44■□□□□ 0.22
SHROOM1-201ENST00000319854 TMEM237Q96Q45 408 aa16.44■□□□□ 0.22
SHROOM1-201ENST00000319854 KCNK9Q9NPC2 374 aa16.44■□□□□ 0.22
SHROOM1-201ENST00000319854 CPSF2Q9P2I0 782 aaKnown RBP16.44■□□□□ 0.22
SHROOM1-201ENST00000319854 SSC5DA1L4H1 1573 aa16.44■□□□□ 0.22
SHROOM1-201ENST00000319854 MROH7Q68CQ1 1323 aa16.43■□□□□ 0.22
SHROOM1-201ENST00000319854 FAM187AA6NFU0 413 aa16.43■□□□□ 0.22
SHROOM1-201ENST00000319854 B4GALT5O43286 388 aa16.43■□□□□ 0.22
SHROOM1-201ENST00000319854 SMIM24O75264 130 aa16.43■□□□□ 0.22
SHROOM1-201ENST00000319854 ACSL3O95573 720 aa16.43■□□□□ 0.22
SHROOM1-201ENST00000319854 GCNT1Q02742 428 aa16.43■□□□□ 0.22
SHROOM1-201ENST00000319854 PSMD6Q15008 389 aa16.43■□□□□ 0.22
SHROOM1-201ENST00000319854 DCPSQ96C86 337 aaKnown RBP16.43■□□□□ 0.22
SHROOM1-201ENST00000319854 HAUS1Q96CS2 278 aa16.43■□□□□ 0.22
SHROOM1-201ENST00000319854 R3HDM2Q9Y2K5 976 aaKnown RBP16.43■□□□□ 0.22
SHROOM1-201ENST00000319854 PHIPQ8WWQ0 1821 aa16.43■□□□□ 0.22
SHROOM1-201ENST00000319854 MYPNQ86TC9 1320 aa16.43■□□□□ 0.22
SHROOM1-201ENST00000319854 PEX11AO75192 247 aa16.43■□□□□ 0.22
SHROOM1-201ENST00000319854 CCNB1P14635 433 aa16.43■□□□□ 0.22
SHROOM1-201ENST00000319854 TCF4P15884 667 aa16.43■□□□□ 0.22
SHROOM1-201ENST00000319854 COILP38432 576 aaPredicted RBP16.43■□□□□ 0.22
SHROOM1-201ENST00000319854 PSMC4P43686 418 aa16.43■□□□□ 0.22
SHROOM1-201ENST00000319854 RPS6KA3P51812 740 aa16.43■□□□□ 0.22
SHROOM1-201ENST00000319854 RAD23BP54727 409 aa16.43■□□□□ 0.22
SHROOM1-201ENST00000319854 MYL6P60660 151 aa16.43■□□□□ 0.22
SHROOM1-201ENST00000319854 TAB3Q8N5C8 712 aaPredicted RBP16.43■□□□□ 0.22
SHROOM1-201ENST00000319854 CD101Q93033 1021 aa16.43■□□□□ 0.22
SHROOM1-201ENST00000319854 RPS6KC1Q96S38 1066 aa16.43■□□□□ 0.22
SHROOM1-201ENST00000319854 TSC22D3Q99576 134 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms