RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 GJA1P17302 382 aa16.8■□□□□ 0.28
FOXR1-201ENST00000317011 PSMC3P17980 439 aa16.8■□□□□ 0.28
FOXR1-201ENST00000317011 MAGEA9P43362 315 aa16.8■□□□□ 0.28
FOXR1-201ENST00000317011 RPS9P46781 194 aaKnown RBP16.8■□□□□ 0.28
FOXR1-201ENST00000317011 ALDH1A3P47895 512 aa16.8■□□□□ 0.28
FOXR1-201ENST00000317011 TUFMP49411 452 aaKnown RBP16.8■□□□□ 0.28
FOXR1-201ENST00000317011 TEAD2Q15562 447 aa16.8■□□□□ 0.28
FOXR1-201ENST00000317011 WSCD1Q658N2 575 aa16.8■□□□□ 0.28
FOXR1-201ENST00000317011 SCARA3Q6AZY7 606 aa16.8■□□□□ 0.28
FOXR1-201ENST00000317011 VITQ6UXI7 678 aa16.8■□□□□ 0.28
FOXR1-201ENST00000317011 MAMSTRQ6ZN01 415 aa16.8■□□□□ 0.28
FOXR1-201ENST00000317011 GAREM2Q75VX8 874 aa16.8■□□□□ 0.28
FOXR1-201ENST00000317011 TTC9BQ8N6N2 239 aa16.8■□□□□ 0.28
FOXR1-201ENST00000317011 C2orf15Q8WU43 125 aaKnown RBP16.8■□□□□ 0.28
FOXR1-201ENST00000317011 E2F7Q96AV8 911 aa16.8■□□□□ 0.28
FOXR1-201ENST00000317011 FAM213AQ9BRX8 229 aa16.8■□□□□ 0.28
FOXR1-201ENST00000317011 TNMDQ9H2S6 317 aa16.8■□□□□ 0.28
FOXR1-201ENST00000317011 TMEM206Q9H813 350 aa16.8■□□□□ 0.28
FOXR1-201ENST00000317011 ZNF334Q9HCZ1 680 aaPredicted RBP16.8■□□□□ 0.28
FOXR1-201ENST00000317011 MYH15Q9Y2K3 1946 aa16.8■□□□□ 0.28
FOXR1-201ENST00000317011 SCN1AP35498 2009 aa16.79■□□□□ 0.28
FOXR1-201ENST00000317011 EXTL3O43909 919 aa16.79■□□□□ 0.28
FOXR1-201ENST00000317011 IDEP14735 1019 aa16.79■□□□□ 0.28
FOXR1-201ENST00000317011 CD72P21854 359 aa16.79■□□□□ 0.28
FOXR1-201ENST00000317011 RFX1P22670 979 aa16.79■□□□□ 0.28
FOXR1-201ENST00000317011 HOXD13P35453 343 aa16.79■□□□□ 0.28
FOXR1-201ENST00000317011 VIPR2P41587 438 aa16.79■□□□□ 0.28
FOXR1-201ENST00000317011 STK38Q15208 465 aa16.79■□□□□ 0.28
FOXR1-201ENST00000317011 ZNF528Q3MIS6 628 aa16.79■□□□□ 0.28
FOXR1-201ENST00000317011 SHC4Q6S5L8 630 aa16.79■□□□□ 0.28
FOXR1-201ENST00000317011 ZNF852Q6ZMS4 543 aa16.79■□□□□ 0.28
FOXR1-201ENST00000317011 C1orf127Q8N9H9 656 aa16.79■□□□□ 0.28
FOXR1-201ENST00000317011 ZSCAN18Q8TBC5 510 aaPredicted RBP16.79■□□□□ 0.28
FOXR1-201ENST00000317011 DEPDC1BQ8WUY9 529 aa16.79■□□□□ 0.28
FOXR1-201ENST00000317011 IRF7Q92985 503 aa16.79■□□□□ 0.28
FOXR1-201ENST00000317011 ZNF396Q96N95 335 aaPredicted RBP16.79■□□□□ 0.28
FOXR1-201ENST00000317011 PYM1Q9BRP8 204 aaKnown RBP16.79■□□□□ 0.28
FOXR1-201ENST00000317011 CBWD1Q9BRT8 395 aa16.79■□□□□ 0.28
FOXR1-201ENST00000317011 CUEDC2Q9H467 287 aa16.79■□□□□ 0.28
FOXR1-201ENST00000317011 HEBP1Q9NRV9 189 aa16.79■□□□□ 0.28
FOXR1-201ENST00000317011 NCANO14594 1321 aa16.78■□□□□ 0.28
FOXR1-201ENST00000317011 KIAA0391O15091 583 aaKnown RBP16.78■□□□□ 0.28
FOXR1-201ENST00000317011 CUTAO60888 179 aa16.78■□□□□ 0.28
FOXR1-201ENST00000317011 PRPF6O94906 941 aaKnown RBP16.78■□□□□ 0.28
FOXR1-201ENST00000317011 TARSP26639 723 aaKnown RBP16.78■□□□□ 0.28
FOXR1-201ENST00000317011 PNPLA4P41247 253 aa16.78■□□□□ 0.28
FOXR1-201ENST00000317011 SLC39A12Q504Y0 691 aa16.78■□□□□ 0.28
FOXR1-201ENST00000317011 EPM2AIP1Q7L775 607 aaPredicted RBP16.78■□□□□ 0.28
FOXR1-201ENST00000317011 LIMS2Q7Z4I7 341 aa16.78■□□□□ 0.28
FOXR1-201ENST00000317011 METTL23Q86XA0 190 aa16.78■□□□□ 0.28
FOXR1-201ENST00000317011 CCDC65Q8IXS2 484 aa16.78■□□□□ 0.28
FOXR1-201ENST00000317011 THEM5Q8N1Q8 247 aa16.78■□□□□ 0.28
FOXR1-201ENST00000317011 PDILTQ8N807 584 aa16.78■□□□□ 0.28
FOXR1-201ENST00000317011 ZNF507Q8TCN5 953 aa16.78■□□□□ 0.28
FOXR1-201ENST00000317011 CACTINQ8WUQ7 758 aaKnown RBP16.78■□□□□ 0.28
FOXR1-201ENST00000317011 NELL1Q92832 810 aa16.78■□□□□ 0.28
FOXR1-201ENST00000317011 RSPRY1Q96DX4 576 aa16.78■□□□□ 0.28
FOXR1-201ENST00000317011 SAAL1Q96ER3 474 aa16.78■□□□□ 0.28
FOXR1-201ENST00000317011 LRRC3BQ96PB8 259 aa16.78■□□□□ 0.28
FOXR1-201ENST00000317011 C7orf25Q9BPX7 421 aa16.78■□□□□ 0.28
FOXR1-201ENST00000317011 BCO2Q9BYV7 579 aa16.78■□□□□ 0.28
FOXR1-201ENST00000317011 TRIM9Q9C026 710 aa16.78■□□□□ 0.28
FOXR1-201ENST00000317011 LRRC27Q9C0I9 530 aa16.78■□□□□ 0.28
FOXR1-201ENST00000317011 IL21Q9HBE4 155 aa16.78■□□□□ 0.28
FOXR1-201ENST00000317011 GDAP2Q9NXN4 497 aa16.78■□□□□ 0.28
FOXR1-201ENST00000317011 FBXO4Q9UKT5 387 aa16.78■□□□□ 0.28
FOXR1-201ENST00000317011 A0A1W2PRU2 124 aa16.77■□□□□ 0.28
FOXR1-201ENST00000317011 HEPACAM2A8MVW5 462 aa16.77■□□□□ 0.28
FOXR1-201ENST00000317011 MAN2B1O00754 1011 aa16.77■□□□□ 0.28
FOXR1-201ENST00000317011 SOAT2O75908 522 aa16.77■□□□□ 0.28
FOXR1-201ENST00000317011 FGF19O95750 216 aa16.77■□□□□ 0.28
FOXR1-201ENST00000317011 HAPLN1P10915 354 aaPredicted RBP16.77■□□□□ 0.28
FOXR1-201ENST00000317011 EHHADHQ08426 723 aa16.77■□□□□ 0.28
FOXR1-201ENST00000317011 FCHO2Q0JRZ9 810 aa16.77■□□□□ 0.28
FOXR1-201ENST00000317011 GRM2Q14416 872 aa16.77■□□□□ 0.28
FOXR1-201ENST00000317011 SV2CQ496J9 727 aa16.77■□□□□ 0.28
FOXR1-201ENST00000317011 TPRG1Q6ZUI0 275 aa16.77■□□□□ 0.28
FOXR1-201ENST00000317011 ITIH5Q86UX2 942 aa16.77■□□□□ 0.28
FOXR1-201ENST00000317011 ARID3BQ8IVW6 561 aaPredicted RBP16.77■□□□□ 0.28
FOXR1-201ENST00000317011 SYCP3Q8IZU3 236 aa16.77■□□□□ 0.28
FOXR1-201ENST00000317011 LRRC52Q8N7C0 313 aa16.77■□□□□ 0.28
FOXR1-201ENST00000317011 GLIS3Q8NEA6 775 aa16.77■□□□□ 0.28
FOXR1-201ENST00000317011 SPATA18Q8TC71 538 aa16.77■□□□□ 0.28
FOXR1-201ENST00000317011 SPPL2BQ8TCT7 592 aa16.77■□□□□ 0.28
FOXR1-201ENST00000317011 BRD9Q9H8M2 597 aa16.77■□□□□ 0.28
FOXR1-201ENST00000317011 OBP2AQ9NY56 170 aa16.77■□□□□ 0.28
FOXR1-201ENST00000317011 SIX4Q9UIU6 781 aa16.77■□□□□ 0.28
FOXR1-201ENST00000317011 AGAP1Q9UPQ3 857 aa16.77■□□□□ 0.28
FOXR1-201ENST00000317011 MRPS17Q9Y2R5 130 aaKnown RBP16.77■□□□□ 0.28
FOXR1-201ENST00000317011 EP300Q09472 2414 aaPredicted RBP16.77■□□□□ 0.27
FOXR1-201ENST00000317011 GVINP1Q7Z2Y8 2422 aa16.77■□□□□ 0.27
FOXR1-201ENST00000317011 ANK1P16157 1881 aa16.76■□□□□ 0.27
FOXR1-201ENST00000317011 COL4A3Q01955 1670 aa16.76■□□□□ 0.27
FOXR1-201ENST00000317011 GABRDO14764 452 aa16.76■□□□□ 0.27
FOXR1-201ENST00000317011 CHADO15335 359 aa16.76■□□□□ 0.27
FOXR1-201ENST00000317011 NCAM2O15394 837 aa16.76■□□□□ 0.27
FOXR1-201ENST00000317011 ATF6P18850 670 aa16.76■□□□□ 0.27
FOXR1-201ENST00000317011 GDI1P31150 447 aa16.76■□□□□ 0.27
FOXR1-201ENST00000317011 TFAMQ00059 246 aaKnown RBP16.76■□□□□ 0.27
FOXR1-201ENST00000317011 AMPD3Q01432 767 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms