RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 TREHO43280 583 aa7.63□□□□□ -1.19
NPHP1-201ENST00000316534 RAD51CO43502 376 aa7.63□□□□□ -1.19
NPHP1-201ENST00000316534 SETSIPP0DME0 302 aa7.63□□□□□ -1.19
NPHP1-201ENST00000316534 CXCR5P32302 372 aa7.63□□□□□ -1.19
NPHP1-201ENST00000316534 FNTAP49354 379 aa7.63□□□□□ -1.19
NPHP1-201ENST00000316534 EPHB4P54760 987 aa7.63□□□□□ -1.19
NPHP1-201ENST00000316534 COPS2P61201 443 aa7.63□□□□□ -1.19
NPHP1-201ENST00000316534 TNNC1P63316 161 aa7.63□□□□□ -1.19
NPHP1-201ENST00000316534 ZNF268Q14587 947 aaPredicted RBP7.63□□□□□ -1.19
NPHP1-201ENST00000316534 TMEM270Q6UE05 265 aa7.63□□□□□ -1.19
NPHP1-201ENST00000316534 CYP4V2Q6ZWL3 525 aaPredicted RBP7.63□□□□□ -1.19
NPHP1-201ENST00000316534 FAM228AQ86W67 206 aa7.63□□□□□ -1.19
NPHP1-201ENST00000316534 GPIHBP1Q8IV16 184 aa7.63□□□□□ -1.19
NPHP1-201ENST00000316534 PRELID2Q8N945 189 aa7.63□□□□□ -1.19
NPHP1-201ENST00000316534 KBTBD7Q8WVZ9 684 aa7.63□□□□□ -1.19
NPHP1-201ENST00000316534 CASKIN2Q8WXE0 1202 aa7.63□□□□□ -1.19
NPHP1-201ENST00000316534 ZNF653Q96CK0 615 aa7.63□□□□□ -1.19
NPHP1-201ENST00000316534 TSEN34Q9BSV6 310 aaKnown RBP7.63□□□□□ -1.19
NPHP1-201ENST00000316534 ERVK-5Q9HDB9 667 aa7.63□□□□□ -1.19
NPHP1-201ENST00000316534 SMARCAL1Q9NZC9 954 aa7.63□□□□□ -1.19
NPHP1-201ENST00000316534 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.63□□□□□ -1.19
NPHP1-201ENST00000316534 GABRQQ9UN88 632 aa7.63□□□□□ -1.19
NPHP1-201ENST00000316534 POLIQ9UNA4 740 aa7.63□□□□□ -1.19
NPHP1-201ENST00000316534 ZNF623O75123 536 aa7.63□□□□□ -1.19
NPHP1-201ENST00000316534 SEC31AO94979 1220 aaKnown RBP7.63□□□□□ -1.19
NPHP1-201ENST00000316534 CYP2C9P11712 490 aa7.63□□□□□ -1.19
NPHP1-201ENST00000316534 C9orf57Q5W0N0 161 aa7.63□□□□□ -1.19
NPHP1-201ENST00000316534 XYLT1Q86Y38 959 aa7.63□□□□□ -1.19
NPHP1-201ENST00000316534 GSTCDQ8NEC7 633 aa7.63□□□□□ -1.19
NPHP1-201ENST00000316534 FEZF2Q8TBJ5 459 aa7.63□□□□□ -1.19
NPHP1-201ENST00000316534 TMEM176AQ96HP8 235 aa7.63□□□□□ -1.19
NPHP1-201ENST00000316534 CAPZA3Q96KX2 299 aa7.63□□□□□ -1.19
NPHP1-201ENST00000316534 TWNKQ96RR1 684 aa7.63□□□□□ -1.19
NPHP1-201ENST00000316534 SLC4A5Q9BY07 1137 aa7.63□□□□□ -1.19
NPHP1-201ENST00000316534 EIF2AQ9BY44 585 aaKnown RBP7.63□□□□□ -1.19
NPHP1-201ENST00000316534 SEZ6LQ9BYH1 1024 aa7.63□□□□□ -1.19
NPHP1-201ENST00000316534 CELF4Q9BZC1 486 aaKnown RBP7.63□□□□□ -1.19
NPHP1-201ENST00000316534 GOLPH3Q9H4A6 298 aa7.63□□□□□ -1.19
NPHP1-201ENST00000316534 WDR35Q9P2L0 1181 aa7.63□□□□□ -1.19
NPHP1-201ENST00000316534 GREB1Q4ZG55 1949 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 H0YGN5 161 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 GABRDO14764 452 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 MED7O43513 233 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 ECM2O94769 699 aaPredicted RBP7.62□□□□□ -1.19
NPHP1-201ENST00000316534 SYF2O95926 243 aaKnown RBP7.62□□□□□ -1.19
NPHP1-201ENST00000316534 ERBB2P04626 1255 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 WARSP23381 471 aaKnown RBP7.62□□□□□ -1.19
NPHP1-201ENST00000316534 CHRNA3P32297 505 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 MARCKSL1P49006 195 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 MRPS6P82932 125 aaKnown RBP7.62□□□□□ -1.19
NPHP1-201ENST00000316534 SLC25A11Q02978 314 aaKnown RBP7.62□□□□□ -1.19
NPHP1-201ENST00000316534 CASP8Q14790 479 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 MAP9Q49MG5 647 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 DPH6Q7L8W6 267 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 SLC13A5Q86YT5 568 aaPredicted RBP7.62□□□□□ -1.19
NPHP1-201ENST00000316534 RELL1Q8IUW5 271 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 IQCKQ8N0W5 287 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 UBL4BQ8N7F7 174 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 EXD1Q8NHP7 514 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 STRIP2Q9ULQ0 834 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 NR2E1Q9Y466 385 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 NFS1Q9Y697 457 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 ITGB3P05106 788 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 PYGMP11217 842 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 CACNB2Q08289 660 aaPredicted RBP7.62□□□□□ -1.19
NPHP1-201ENST00000316534 BIRC3Q13489 604 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 GLIPR1L2Q4G1C9 344 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 TAF3Q5VWG9 929 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 RHBDF2Q6PJF5 856 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 SYDE1Q6ZW31 735 aaPredicted RBP7.62□□□□□ -1.19
NPHP1-201ENST00000316534 ARFGAP1Q8N6T3 406 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 NLRP7Q8WX94 980 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 KHSRPQ92945 711 aaKnown RBP eCLIP7.62□□□□□ -1.19
NPHP1-201ENST00000316534 IMPG2Q9BZV3 1241 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 SMYD3Q9H7B4 428 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 IP6K2Q9UHH9 426 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 TRPV2Q9Y5S1 764 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 CALCAP01258 141 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 CHRNA1P02708 482 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 NSFP46459 744 aaKnown RBP7.62□□□□□ -1.19
NPHP1-201ENST00000316534 IRX5P78411 483 aaPredicted RBP7.62□□□□□ -1.19
NPHP1-201ENST00000316534 OGDHQ02218 1023 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 NOGQ13253 232 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 ZNF667Q5HYK9 610 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 WDR78Q5VTH9 848 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 NAA35Q5VZE5 725 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 DENND1BQ6P3S1 775 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 TMEM110Q86TL2 294 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 IFT20Q8IY31 132 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 KRT222Q8N1A0 295 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 TMEM35BQ8NCS4 154 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 CENPIQ92674 756 aaPredicted RBP7.62□□□□□ -1.19
NPHP1-201ENST00000316534 WNT8BQ93098 351 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 ELMO3Q96BJ8 720 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 AP5M1Q9H0R1 490 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 CREBZFQ9NS37 354 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 SAGE1Q9NXZ1 904 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 GRHL1Q9NZI5 618 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 CTTNBP2NLQ9P2B4 639 aa7.62□□□□□ -1.19
NPHP1-201ENST00000316534 TNPO2O14787 897 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms