RNA–Protein interactions for RNA: ENST00000315713.5

ABCD3-201, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCD3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-201ENST00000315713 SCN1AP35498 2009 aa13.09□□□□□ -0.31
ABCD3-201ENST00000315713 BRCC3P46736 316 aa13.09□□□□□ -0.31
ABCD3-201ENST00000315713 GUCY2FP51841 1108 aa13.09□□□□□ -0.31
ABCD3-201ENST00000315713 STARD6P59095 220 aa13.09□□□□□ -0.31
ABCD3-201ENST00000315713 MLF2Q15773 248 aaPredicted RBP13.09□□□□□ -0.31
ABCD3-201ENST00000315713 XXYLT1Q8NBI6 393 aa13.09□□□□□ -0.31
ABCD3-201ENST00000315713 C3orf58Q8NDZ4 430 aa13.09□□□□□ -0.31
ABCD3-201ENST00000315713 ITFG1Q8TB96 612 aa13.09□□□□□ -0.31
ABCD3-201ENST00000315713 SLC7A14Q8TBB6 771 aa13.09□□□□□ -0.31
ABCD3-201ENST00000315713 NUP210Q8TEM1 1887 aaPredicted RBP13.09□□□□□ -0.31
ABCD3-201ENST00000315713 ING5Q8WYH8 240 aa13.09□□□□□ -0.31
ABCD3-201ENST00000315713 PIK3R5Q8WYR1 880 aa13.09□□□□□ -0.31
ABCD3-201ENST00000315713 ERCC4Q92889 916 aaPredicted RBP13.09□□□□□ -0.31
ABCD3-201ENST00000315713 FGF13Q92913 245 aa13.09□□□□□ -0.31
ABCD3-201ENST00000315713 KIAA1586Q9HCI6 787 aa13.09□□□□□ -0.31
ABCD3-201ENST00000315713 MAPK8IP1Q9UQF2 711 aa13.09□□□□□ -0.31
ABCD3-201ENST00000315713 DERAQ9Y315 318 aa13.09□□□□□ -0.31
ABCD3-201ENST00000315713 C2CD2Q9Y426 696 aa13.09□□□□□ -0.31
ABCD3-201ENST00000315713 ZFP37Q9Y6Q3 630 aaPredicted RBP13.09□□□□□ -0.31
ABCD3-201ENST00000315713 I3L4J1 428 aa13.08□□□□□ -0.32
ABCD3-201ENST00000315713 CALUO43852 315 aaPredicted RBP13.08□□□□□ -0.32
ABCD3-201ENST00000315713 EXOC3O60645 756 aa13.08□□□□□ -0.32
ABCD3-201ENST00000315713 IGFBP6P24592 240 aaPredicted RBP13.08□□□□□ -0.32
ABCD3-201ENST00000315713 LRPAP1P30533 357 aa13.08□□□□□ -0.32
ABCD3-201ENST00000315713 UBXN2BQ14CS0 331 aa13.08□□□□□ -0.32
ABCD3-201ENST00000315713 ZBTB6Q15916 424 aa13.08□□□□□ -0.32
ABCD3-201ENST00000315713 SPATA1Q5VX52 437 aa13.08□□□□□ -0.32
ABCD3-201ENST00000315713 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.08□□□□□ -0.32
ABCD3-201ENST00000315713 MTSS1LQ765P7 747 aa13.08□□□□□ -0.32
ABCD3-201ENST00000315713 NT5DC4Q86YG4 428 aa13.08□□□□□ -0.32
ABCD3-201ENST00000315713 CBWD2Q8IUF1 395 aa13.08□□□□□ -0.32
ABCD3-201ENST00000315713 NPAS3Q8IXF0 933 aa13.08□□□□□ -0.32
ABCD3-201ENST00000315713 ELOA2Q8IYF1 753 aaPredicted RBP13.08□□□□□ -0.32
ABCD3-201ENST00000315713 SUMF1Q8NBK3 374 aa13.08□□□□□ -0.32
ABCD3-201ENST00000315713 RDH13Q8NBN7 331 aa13.08□□□□□ -0.32
ABCD3-201ENST00000315713 LNX1Q8TBB1 728 aaPredicted RBP13.08□□□□□ -0.32
ABCD3-201ENST00000315713 RUBCNQ92622 972 aa13.08□□□□□ -0.32
ABCD3-201ENST00000315713 SHDQ96IW2 340 aa13.08□□□□□ -0.32
ABCD3-201ENST00000315713 GSDMAQ96QA5 445 aa13.08□□□□□ -0.32
ABCD3-201ENST00000315713 SPATA6Q9NWH7 488 aaPredicted RBP13.08□□□□□ -0.32
ABCD3-201ENST00000315713 MTF2Q9Y483 593 aaPredicted RBP13.08□□□□□ -0.32
ABCD3-201ENST00000315713 PCDHA5Q9Y5H7 936 aa13.08□□□□□ -0.32
ABCD3-201ENST00000315713 TSC2P49815 1807 aa13.08□□□□□ -0.32
ABCD3-201ENST00000315713 KANSL1LA0AUZ9 987 aa13.07□□□□□ -0.32
ABCD3-201ENST00000315713 PDXKO00764 312 aa13.07□□□□□ -0.32
ABCD3-201ENST00000315713 XYLBO75191 536 aa13.07□□□□□ -0.32
ABCD3-201ENST00000315713 HOXA9P31269 272 aa13.07□□□□□ -0.32
ABCD3-201ENST00000315713 TFAMQ00059 246 aaKnown RBP13.07□□□□□ -0.32
ABCD3-201ENST00000315713 SURF1Q15526 300 aa13.07□□□□□ -0.32
ABCD3-201ENST00000315713 SNRNP35Q16560 246 aaKnown RBP13.07□□□□□ -0.32
ABCD3-201ENST00000315713 ZNF658Q5TYW1 1059 aaPredicted RBP13.07□□□□□ -0.32
ABCD3-201ENST00000315713 PDXDC1Q6P996 788 aa13.07□□□□□ -0.32
ABCD3-201ENST00000315713 CD300LGQ6UXG3 332 aa13.07□□□□□ -0.32
ABCD3-201ENST00000315713 C12orf56Q8IXR9 622 aa13.07□□□□□ -0.32
ABCD3-201ENST00000315713 EFCAB13Q8IY85 973 aa13.07□□□□□ -0.32
ABCD3-201ENST00000315713 SMYD4Q8IYR2 804 aaPredicted RBP13.07□□□□□ -0.32
ABCD3-201ENST00000315713 TMEM130Q8N3G9 435 aa13.07□□□□□ -0.32
ABCD3-201ENST00000315713 GUF1Q8N442 669 aaKnown RBP13.07□□□□□ -0.32
ABCD3-201ENST00000315713 CACTINQ8WUQ7 758 aaKnown RBP13.07□□□□□ -0.32
ABCD3-201ENST00000315713 DDX23Q9BUQ8 820 aaKnown RBP13.07□□□□□ -0.32
ABCD3-201ENST00000315713 KCTD10Q9H3F6 313 aa13.07□□□□□ -0.32
ABCD3-201ENST00000315713 PDE11AQ9HCR9 933 aa13.07□□□□□ -0.32
ABCD3-201ENST00000315713 DPP3Q9NY33 737 aa13.07□□□□□ -0.32
ABCD3-201ENST00000315713 ATG2BQ96BY7 2078 aa13.07□□□□□ -0.32
ABCD3-201ENST00000315713 DENND4CQ5VZ89 1909 aa13.07□□□□□ -0.32
ABCD3-201ENST00000315713 GREB1Q4ZG55 1949 aa13.06□□□□□ -0.32
ABCD3-201ENST00000315713 GOLGA6L22H0YM25 854 aa13.06□□□□□ -0.32
ABCD3-201ENST00000315713 NR3C1P04150 777 aa13.06□□□□□ -0.32
ABCD3-201ENST00000315713 TMEM191BP0C7N4 346 aa13.06□□□□□ -0.32
ABCD3-201ENST00000315713 CD72P21854 359 aa13.06□□□□□ -0.32
ABCD3-201ENST00000315713 FGFR3P22607 806 aa13.06□□□□□ -0.32
ABCD3-201ENST00000315713 TKTP29401 623 aaKnown RBP13.06□□□□□ -0.32
ABCD3-201ENST00000315713 WNT7BP56706 349 aa13.06□□□□□ -0.32
ABCD3-201ENST00000315713 PUM1Q14671 1186 aaKnown RBP eCLIP13.06□□□□□ -0.32
ABCD3-201ENST00000315713 PABPC1LQ4VXU2 614 aaKnown RBP13.06□□□□□ -0.32
ABCD3-201ENST00000315713 C9orf57Q5W0N0 161 aa13.06□□□□□ -0.32
ABCD3-201ENST00000315713 ISM2Q6H9L7 571 aa13.06□□□□□ -0.32
ABCD3-201ENST00000315713 DSTYKQ6XUX3 929 aa13.06□□□□□ -0.32
ABCD3-201ENST00000315713 CLEC17AQ6ZS10 378 aa13.06□□□□□ -0.32
ABCD3-201ENST00000315713 ANKRD36BP1Q96IX9 119 aa13.06□□□□□ -0.32
ABCD3-201ENST00000315713 FNBP1Q96RU3 617 aa13.06□□□□□ -0.32
ABCD3-201ENST00000315713 BCO2Q9BYV7 579 aa13.06□□□□□ -0.32
ABCD3-201ENST00000315713 LTB4R2Q9NPC1 389 aa13.06□□□□□ -0.32
ABCD3-201ENST00000315713 DNMT3BQ9UBC3 853 aaKnown RBP13.06□□□□□ -0.32
ABCD3-201ENST00000315713 R3HCC1Q9Y3T6 440 aaKnown RBP13.06□□□□□ -0.32
ABCD3-201ENST00000315713 KMT2BQ9UMN6 2715 aaPredicted RBP13.06□□□□□ -0.32
ABCD3-201ENST00000315713 CNOT1A5YKK6 2376 aaKnown RBP13.06□□□□□ -0.32
ABCD3-201ENST00000315713 SDK1Q7Z5N4 2213 aa13.05□□□□□ -0.32
ABCD3-201ENST00000315713 PPEF2O14830 753 aa13.05□□□□□ -0.32
ABCD3-201ENST00000315713 SYN3O14994 580 aa13.05□□□□□ -0.32
ABCD3-201ENST00000315713 LAMTOR5O43504 91 aa13.05□□□□□ -0.32
ABCD3-201ENST00000315713 KRT19P08727 400 aa13.05□□□□□ -0.32
ABCD3-201ENST00000315713 POU2F2P09086 479 aa13.05□□□□□ -0.32
ABCD3-201ENST00000315713 DLATP10515 647 aaKnown RBP13.05□□□□□ -0.32
ABCD3-201ENST00000315713 TNNI1P19237 187 aa13.05□□□□□ -0.32
ABCD3-201ENST00000315713 OR1D2P34982 312 aa13.05□□□□□ -0.32
ABCD3-201ENST00000315713 PRKCQQ04759 706 aa13.05□□□□□ -0.32
ABCD3-201ENST00000315713 STIM1Q13586 685 aa13.05□□□□□ -0.32
ABCD3-201ENST00000315713 RAB33AQ14088 237 aa13.05□□□□□ -0.32
ABCD3-201ENST00000315713 CAMK4Q16566 473 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms