RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 APEX2Q9UBZ4 518 aa10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 BLOC1S6Q9UL45 172 aa10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 HNRNPDLO14979 420 aaKnown RBP10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 MTA2O94776 668 aa10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 SUN1O94901 812 aa10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 UBOX5O94941 541 aa10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 LINGO3P0C6S8 592 aa10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 SRGAP2CP0DJJ0 459 aa10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 MAPTP10636 758 aaKnown RBP10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 PEX5P50542 639 aa10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 SGSM1Q2NKQ1 1148 aa10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 TTC27Q6P3X3 843 aa10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 EXOC3L1Q86VI1 746 aa10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 PLEKHO2Q8TD55 490 aa10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 ZBTB45Q96K62 511 aaPredicted RBP10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 IFT74Q96LB3 600 aa10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 SERPINB12Q96P63 405 aa10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 EPAS1Q99814 870 aa10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 YIPF3Q9GZM5 350 aa10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 WNT8AQ9H1J5 351 aa10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 DHX33Q9H6R0 707 aaKnown RBP10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 ECT2Q9H8V3 914 aa10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 SLC45A1Q9Y2W3 748 aa10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 RNF8O76064 485 aa10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 GJB6O95452 261 aa10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 ZNF286BP0CG31 522 aa10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 IBSPP21815 317 aaPredicted RBP10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 ATP5DP30049 168 aa10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 COILP38432 576 aaPredicted RBP10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 GCLMP48507 274 aa10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 COPS2P61201 443 aa10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 MRPS35P82673 323 aaKnown RBP10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 FAM110CQ1W6H9 321 aa10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 SEL1L2Q5TEA6 688 aa10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 FAM160B1Q5W0V3 765 aa10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 RGMBQ6NW40 437 aa10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 CCDC137Q6PK04 289 aaKnown RBP10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 PLEKHH3Q7Z736 793 aa10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 C12orf50Q8NA57 414 aaPredicted RBP10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 AGAP11Q8TF27 550 aa10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 AFG1LQ8WV93 481 aa10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 PRPF31Q8WWY3 499 aaKnown RBP10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 POMGNT1Q8WZA1 660 aa10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 LENG1Q96BZ8 264 aaPredicted RBP10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 RBM41Q96IZ5 413 aaKnown RBP10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 MAML3Q96JK9 1138 aa10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 TIPINQ9BVW5 301 aa10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 TAS2R14Q9NYV8 317 aa10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 LOXHD1Q8IVV2 1947 aa10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 PASKQ96RG2 1323 aa10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 SMIM23A6NLE4 172 aa10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 TTLL13PA6NNM8 815 aa10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 ADCY6O43306 1168 aa10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 STRNO43815 780 aa10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 CSDE1O75534 798 aaKnown RBP10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 EDN1P05305 212 aa10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 ADRB2P07550 413 aa10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 BFSP1Q12934 665 aa10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 SEZ6Q53EL9 994 aa10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 MAMDC4Q6UXC1 1216 aa10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 XXYLT1Q8NBI6 393 aa10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 GTF3C2Q8WUA4 911 aaPredicted RBP10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 NTPCRQ9BSD7 190 aaKnown RBP10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 NIFKQ9BYG3 293 aaKnown RBP10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 ARHGEF3Q9NR81 526 aa10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 MTUS1Q9ULD2 1270 aa10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 ABT1Q9ULW3 272 aaKnown RBP10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 ARL2BPQ9Y2Y0 163 aa10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 EMSYQ7Z589 1322 aa10.93□□□□□ -0.66
APOBEC3F-201ENST00000308521 ZBTB42B2RXF5 422 aa10.92□□□□□ -0.66
APOBEC3F-201ENST00000308521 HARSP12081 509 aaKnown RBP10.92□□□□□ -0.66
APOBEC3F-201ENST00000308521 FGFR4P22455 802 aa10.92□□□□□ -0.66
APOBEC3F-201ENST00000308521 GPC5P78333 572 aa10.92□□□□□ -0.66
APOBEC3F-201ENST00000308521 ARHGAP1Q07960 439 aa10.92□□□□□ -0.66
APOBEC3F-201ENST00000308521 PPP3CAQ08209 521 aa10.92□□□□□ -0.66
APOBEC3F-201ENST00000308521 TARBP2Q15633 366 aaKnown RBP10.92□□□□□ -0.66
APOBEC3F-201ENST00000308521 CCL14Q16627 93 aa10.92□□□□□ -0.66
APOBEC3F-201ENST00000308521 APBB1IPQ7Z5R6 666 aaPredicted RBP10.92□□□□□ -0.66
APOBEC3F-201ENST00000308521 MAP4K3Q8IVH8 894 aa10.92□□□□□ -0.66
APOBEC3F-201ENST00000308521 ZDHHC14Q8IZN3 488 aa10.92□□□□□ -0.66
APOBEC3F-201ENST00000308521 KIRREL3Q8IZU9 778 aa10.92□□□□□ -0.66
APOBEC3F-201ENST00000308521 CKAP2Q8WWK9 683 aa10.92□□□□□ -0.66
APOBEC3F-201ENST00000308521 SLCO2A1Q92959 643 aa10.92□□□□□ -0.66
APOBEC3F-201ENST00000308521 CD101Q93033 1021 aa10.92□□□□□ -0.66
APOBEC3F-201ENST00000308521 ZNF570Q96NI8 536 aa10.92□□□□□ -0.66
APOBEC3F-201ENST00000308521 TOPORSQ9NS56 1045 aaPredicted RBP10.92□□□□□ -0.66
APOBEC3F-201ENST00000308521 CTNNAL1Q9UBT7 734 aa10.92□□□□□ -0.66
APOBEC3F-201ENST00000308521 PRKAG3Q9UGI9 489 aa10.92□□□□□ -0.66
APOBEC3F-201ENST00000308521 LRRD1A4D1F6 860 aa10.92□□□□□ -0.66
APOBEC3F-201ENST00000308521 WFS1O76024 890 aa10.92□□□□□ -0.66
APOBEC3F-201ENST00000308521 PYGLP06737 847 aa10.92□□□□□ -0.66
APOBEC3F-201ENST00000308521 GNAT1P11488 350 aa10.92□□□□□ -0.66
APOBEC3F-201ENST00000308521 CYP2B6P20813 491 aa10.92□□□□□ -0.66
APOBEC3F-201ENST00000308521 SKIV2L2P42285 1042 aaKnown RBP10.92□□□□□ -0.66
APOBEC3F-201ENST00000308521 IFNAR2P48551 515 aa10.92□□□□□ -0.66
APOBEC3F-201ENST00000308521 KCNJ2P63252 427 aa10.92□□□□□ -0.66
APOBEC3F-201ENST00000308521 GRB14Q14449 540 aa10.92□□□□□ -0.66
APOBEC3F-201ENST00000308521 UBAP2Q5T6F2 1119 aaKnown RBP10.92□□□□□ -0.66
APOBEC3F-201ENST00000308521 LMBRD2Q68DH5 695 aaPredicted RBP10.92□□□□□ -0.66
APOBEC3F-201ENST00000308521 AADACL2Q6P093 401 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms