RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 FNBP1LQ5T0N5 605 aa17.73■□□□□ 0.43
SQLE-201ENST00000265896 C12orf56Q8IXR9 622 aa17.73■□□□□ 0.43
SQLE-201ENST00000265896 FBF1Q8TES7 1133 aa17.73■□□□□ 0.43
SQLE-201ENST00000265896 EBF2Q9HAK2 575 aa17.73■□□□□ 0.43
SQLE-201ENST00000265896 FBXO6Q9NRD1 293 aaPredicted RBP17.73■□□□□ 0.43
SQLE-201ENST00000265896 TBC1D22BQ9NU19 505 aa17.73■□□□□ 0.43
SQLE-201ENST00000265896 DONSONQ9NYP3 566 aa17.73■□□□□ 0.43
SQLE-201ENST00000265896 NXF1Q9UBU9 619 aaKnown RBP17.73■□□□□ 0.43
SQLE-201ENST00000265896 AGTPBP1Q9UPW5 1226 aa17.73■□□□□ 0.43
SQLE-201ENST00000265896 UBR3Q6ZT12 1888 aa17.73■□□□□ 0.43
SQLE-201ENST00000265896 LTBP1Q14766 1721 aa17.73■□□□□ 0.43
SQLE-201ENST00000265896 ZNFX1Q9P2E3 1918 aaKnown RBP17.73■□□□□ 0.43
SQLE-201ENST00000265896 ANKRD31Q8N7Z5 1873 aa17.73■□□□□ 0.43
SQLE-201ENST00000265896 CFAP69A5D8W1 941 aa17.73■□□□□ 0.43
SQLE-201ENST00000265896 ASMTLO95671 621 aa17.73■□□□□ 0.43
SQLE-201ENST00000265896 RAD23BP54727 409 aa17.73■□□□□ 0.43
SQLE-201ENST00000265896 SEPT7Q16181 437 aaKnown RBP17.73■□□□□ 0.43
SQLE-201ENST00000265896 CCNG2Q16589 344 aa17.73■□□□□ 0.43
SQLE-201ENST00000265896 RAB6CQ53S08 254 aa17.73■□□□□ 0.43
SQLE-201ENST00000265896 RSBN1LQ6PCB5 846 aaPredicted RBP17.73■□□□□ 0.43
SQLE-201ENST00000265896 DTX3LQ8TDB6 740 aa17.73■□□□□ 0.43
SQLE-201ENST00000265896 ZNF606Q8WXB4 792 aa17.73■□□□□ 0.43
SQLE-201ENST00000265896 IFT74Q96LB3 600 aa17.73■□□□□ 0.43
SQLE-201ENST00000265896 TRIM56Q9BRZ2 755 aaKnown RBP17.73■□□□□ 0.43
SQLE-201ENST00000265896 MSTO1Q9BUK6 570 aa17.73■□□□□ 0.43
SQLE-201ENST00000265896 MOV10L1Q9BXT6 1211 aaKnown RBP17.73■□□□□ 0.43
SQLE-201ENST00000265896 RAB6CQ9H0N0 254 aa17.73■□□□□ 0.43
SQLE-201ENST00000265896 RNF146Q9NTX7 359 aa17.73■□□□□ 0.43
SQLE-201ENST00000265896 GINM1Q9NU53 330 aa17.73■□□□□ 0.43
SQLE-201ENST00000265896 CD19P15391 556 aa17.73■□□□□ 0.43
SQLE-201ENST00000265896 MARK3P27448 753 aa17.73■□□□□ 0.43
SQLE-201ENST00000265896 NAIF1Q69YI7 327 aaPredicted RBP17.73■□□□□ 0.43
SQLE-201ENST00000265896 ASRGL1Q7L266 308 aa17.73■□□□□ 0.43
SQLE-201ENST00000265896 OTOAQ7RTW8 1153 aa17.73■□□□□ 0.43
SQLE-201ENST00000265896 LRRC6Q86X45 466 aa17.73■□□□□ 0.43
SQLE-201ENST00000265896 ASAP3Q8TDY4 903 aa17.73■□□□□ 0.43
SQLE-201ENST00000265896 PTPRN2Q92932 1015 aa17.73■□□□□ 0.43
SQLE-201ENST00000265896 TBC1D10AQ9BXI6 508 aa17.73■□□□□ 0.43
SQLE-201ENST00000265896 SLX4Q8IY92 1834 aa17.73■□□□□ 0.43
SQLE-201ENST00000265896 RGS20O76081 388 aa17.72■□□□□ 0.43
SQLE-201ENST00000265896 GJB1P08034 283 aa17.72■□□□□ 0.43
SQLE-201ENST00000265896 ACO1P21399 889 aaKnown RBP17.72■□□□□ 0.43
SQLE-201ENST00000265896 FAXCQ5TGI0 409 aa17.72■□□□□ 0.43
SQLE-201ENST00000265896 CROCCP2Q86T23 111 aa17.72■□□□□ 0.43
SQLE-201ENST00000265896 ABRAQ8N0Z2 381 aa17.72■□□□□ 0.43
SQLE-201ENST00000265896 IWS1Q96ST2 819 aa17.72■□□□□ 0.43
SQLE-201ENST00000265896 MTMR12Q9C0I1 747 aa17.72■□□□□ 0.43
SQLE-201ENST00000265896 YIPF3Q9GZM5 350 aa17.72■□□□□ 0.43
SQLE-201ENST00000265896 FAM155BO75949 473 aa17.72■□□□□ 0.43
SQLE-201ENST00000265896 ABL2P42684 1182 aa17.72■□□□□ 0.43
SQLE-201ENST00000265896 SP2Q02086 613 aa17.72■□□□□ 0.43
SQLE-201ENST00000265896 CENPCQ03188 943 aa17.72■□□□□ 0.43
SQLE-201ENST00000265896 CRELD2Q6UXH1 353 aaPredicted RBP17.72■□□□□ 0.43
SQLE-201ENST00000265896 ZC3H18Q86VM9 953 aaKnown RBP17.72■□□□□ 0.43
SQLE-201ENST00000265896 FAM13CQ8NE31 585 aa17.72■□□□□ 0.43
SQLE-201ENST00000265896 FEZF2Q8TBJ5 459 aa17.72■□□□□ 0.43
SQLE-201ENST00000265896 SLITRK1Q96PX8 696 aa17.72■□□□□ 0.43
SQLE-201ENST00000265896 NUDCD1Q96RS6 583 aa17.72■□□□□ 0.43
SQLE-201ENST00000265896 ZNF395Q9H8N7 513 aaPredicted RBP17.72■□□□□ 0.43
SQLE-201ENST00000265896 ARMCX1Q9P291 453 aa17.72■□□□□ 0.43
SQLE-201ENST00000265896 NRXN2Q9P2S2 1712 aa17.72■□□□□ 0.43
SQLE-201ENST00000265896 ASNSP08243 561 aa17.71■□□□□ 0.43
SQLE-201ENST00000265896 T-ENOLP0DO92 83 aa17.71■□□□□ 0.43
SQLE-201ENST00000265896 BASP1P80723 227 aaKnown RBP17.71■□□□□ 0.43
SQLE-201ENST00000265896 GCNT1Q02742 428 aa17.71■□□□□ 0.43
SQLE-201ENST00000265896 ZACNQ401N2 412 aa17.71■□□□□ 0.43
SQLE-201ENST00000265896 SNRNP48Q6IEG0 339 aaKnown RBP17.71■□□□□ 0.43
SQLE-201ENST00000265896 C3orf62Q6ZUJ4 267 aa17.71■□□□□ 0.43
SQLE-201ENST00000265896 CHMP2BQ9UQN3 213 aa17.71■□□□□ 0.43
SQLE-201ENST00000265896 WNT10BO00744 389 aa17.71■□□□□ 0.43
SQLE-201ENST00000265896 C4BPAP04003 597 aaKnown RBP17.71■□□□□ 0.43
SQLE-201ENST00000265896 GPX6P59796 221 aa17.71■□□□□ 0.43
SQLE-201ENST00000265896 TRAF1Q13077 416 aa17.71■□□□□ 0.43
SQLE-201ENST00000265896 SPARCL1Q14515 664 aa17.71■□□□□ 0.43
SQLE-201ENST00000265896 STAT4Q14765 748 aa17.71■□□□□ 0.43
SQLE-201ENST00000265896 PPP1R21Q6ZMI0 780 aa17.71■□□□□ 0.43
SQLE-201ENST00000265896 TTC7BQ86TV6 843 aa17.71■□□□□ 0.43
SQLE-201ENST00000265896 ZCCHC9Q8N567 271 aaKnown RBP17.71■□□□□ 0.43
SQLE-201ENST00000265896 HSPH1Q92598 858 aa17.71■□□□□ 0.43
SQLE-201ENST00000265896 TTC17Q96AE7 1141 aa17.71■□□□□ 0.43
SQLE-201ENST00000265896 CYP26B1Q9NR63 512 aa17.71■□□□□ 0.43
SQLE-201ENST00000265896 K7ERI5 159 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 CYP1A1P04798 512 aaPredicted RBP17.7■□□□□ 0.42
SQLE-201ENST00000265896 SRGAP2CP0DJJ0 459 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 GCKP35557 465 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 CDH8P55286 799 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 MYL6P60660 151 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 TFAMQ00059 246 aaKnown RBP17.7■□□□□ 0.42
SQLE-201ENST00000265896 NCOA4Q13772 614 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 TCEAL1Q15170 157 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 GPAT2Q6NUI2 795 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 DNAJC24Q6P3W2 148 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 NPNTQ6UXI9 565 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 APBB1IPQ7Z5R6 666 aaPredicted RBP17.7■□□□□ 0.42
SQLE-201ENST00000265896 FAM71DQ8N9W8 422 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 ACTL9Q8TC94 416 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 CFAP57Q96MR6 1250 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 SENP7Q9BQF6 1050 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 MRIQ9BWK5 157 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 C10orf71Q711Q0 1435 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms