RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 MORF4L2Q15014 288 aa14.66□□□□□ -0.06
CDH3-201ENST00000264012 PDK1Q15118 436 aa14.66□□□□□ -0.06
CDH3-201ENST00000264012 SV2AQ7L0J3 742 aa14.66□□□□□ -0.06
CDH3-201ENST00000264012 ULK4Q96C45 1275 aa14.66□□□□□ -0.06
CDH3-201ENST00000264012 TRPV6Q9H1D0 765 aa14.66□□□□□ -0.06
CDH3-201ENST00000264012 NOP53Q9NZM5 478 aaKnown RBP14.66□□□□□ -0.06
CDH3-201ENST00000264012 HACD3Q9P035 362 aa14.66□□□□□ -0.06
CDH3-201ENST00000264012 ORC6Q9Y5N6 252 aa14.66□□□□□ -0.06
CDH3-201ENST00000264012 C17orf102A2RUQ5 167 aa14.66□□□□□ -0.06
CDH3-201ENST00000264012 TTC36A6NLP5 189 aa14.66□□□□□ -0.06
CDH3-201ENST00000264012 AGBL2Q5U5Z8 902 aa14.66□□□□□ -0.06
CDH3-201ENST00000264012 SPATA21Q7Z572 469 aa14.66□□□□□ -0.06
CDH3-201ENST00000264012 DDX27Q96GQ7 796 aaKnown RBP14.66□□□□□ -0.06
CDH3-201ENST00000264012 EPN3Q9H201 632 aa14.66□□□□□ -0.06
CDH3-201ENST00000264012 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.66□□□□□ -0.06
CDH3-201ENST00000264012 TRAF3IP3Q9Y228 551 aa14.66□□□□□ -0.06
CDH3-201ENST00000264012 HMBSP08397 361 aa14.66□□□□□ -0.06
CDH3-201ENST00000264012 FAM200BP0CF97 657 aa14.66□□□□□ -0.06
CDH3-201ENST00000264012 PRLRP16471 622 aa14.66□□□□□ -0.06
CDH3-201ENST00000264012 ZNF200P98182 395 aaPredicted RBP14.66□□□□□ -0.06
CDH3-201ENST00000264012 MAPK7Q13164 816 aa14.66□□□□□ -0.06
CDH3-201ENST00000264012 ORC1Q13415 861 aa14.66□□□□□ -0.06
CDH3-201ENST00000264012 KIZQ2M2Z5 673 aa14.66□□□□□ -0.06
CDH3-201ENST00000264012 PAPD7Q5XG87 772 aaKnown RBP14.66□□□□□ -0.06
CDH3-201ENST00000264012 TAS2R42Q7RTR8 314 aa14.66□□□□□ -0.06
CDH3-201ENST00000264012 PPHLN1Q8NEY8 458 aaKnown RBP14.66□□□□□ -0.06
CDH3-201ENST00000264012 ZNF507Q8TCN5 953 aa14.66□□□□□ -0.06
CDH3-201ENST00000264012 PABPC5Q96DU9 382 aaKnown RBP14.66□□□□□ -0.06
CDH3-201ENST00000264012 PNKPQ96T60 521 aa14.66□□□□□ -0.06
CDH3-201ENST00000264012 TRPA1O75762 1119 aa14.66□□□□□ -0.06
CDH3-201ENST00000264012 HSP90AA5PQ58FG0 334 aa14.66□□□□□ -0.06
CDH3-201ENST00000264012 DCP1BQ8IZD4 617 aaKnown RBP14.66□□□□□ -0.06
CDH3-201ENST00000264012 SLC5A5Q92911 643 aa14.66□□□□□ -0.06
CDH3-201ENST00000264012 DUSP9Q99956 384 aaKnown RBP14.66□□□□□ -0.06
CDH3-201ENST00000264012 KDM4FA0A1W2PPD8 638 aa14.65□□□□□ -0.06
CDH3-201ENST00000264012 SMAPO00193 183 aa14.65□□□□□ -0.06
CDH3-201ENST00000264012 FKBP1CQ5VVH2 108 aa14.65□□□□□ -0.06
CDH3-201ENST00000264012 KRT80Q6KB66 452 aa14.65□□□□□ -0.06
CDH3-201ENST00000264012 C3orf62Q6ZUJ4 267 aa14.65□□□□□ -0.06
CDH3-201ENST00000264012 CCT8L2Q96SF2 557 aa14.65□□□□□ -0.06
CDH3-201ENST00000264012 PPCSQ9HAB8 311 aa14.65□□□□□ -0.06
CDH3-201ENST00000264012 CCDC78A2IDD5 438 aa14.65□□□□□ -0.06
CDH3-201ENST00000264012 LMNAP02545 664 aaKnown RBP14.65□□□□□ -0.06
CDH3-201ENST00000264012 OR1G1P47890 313 aa14.65□□□□□ -0.06
CDH3-201ENST00000264012 AMHR2Q16671 573 aa14.65□□□□□ -0.06
CDH3-201ENST00000264012 C1orf146Q5VVC0 180 aa14.65□□□□□ -0.06
CDH3-201ENST00000264012 CD302Q8IX05 232 aa14.65□□□□□ -0.06
CDH3-201ENST00000264012 FAM71DQ8N9W8 422 aa14.65□□□□□ -0.06
CDH3-201ENST00000264012 PIDD1Q9HB75 910 aa14.65□□□□□ -0.06
CDH3-201ENST00000264012 PRDM5Q9NQX1 630 aaPredicted RBP14.65□□□□□ -0.06
CDH3-201ENST00000264012 RICTORQ6R327 1708 aa14.65□□□□□ -0.06
CDH3-201ENST00000264012 PSTPIP1O43586 416 aa14.65□□□□□ -0.06
CDH3-201ENST00000264012 DDNO94850 711 aaPredicted RBP14.65□□□□□ -0.06
CDH3-201ENST00000264012 VTNP04004 478 aa14.65□□□□□ -0.06
CDH3-201ENST00000264012 RGS2P41220 211 aa14.65□□□□□ -0.06
CDH3-201ENST00000264012 SLC29A2Q14542 456 aa14.65□□□□□ -0.06
CDH3-201ENST00000264012 SGSM3Q96HU1 749 aa14.65□□□□□ -0.06
CDH3-201ENST00000264012 DDX50Q9BQ39 737 aaKnown RBP14.65□□□□□ -0.06
CDH3-201ENST00000264012 ROPN1BQ9BZX4 212 aaPredicted RBP14.65□□□□□ -0.06
CDH3-201ENST00000264012 ROPN1Q9HAT0 212 aaPredicted RBP14.65□□□□□ -0.06
CDH3-201ENST00000264012 FAM198AQ9UFP1 575 aa14.65□□□□□ -0.06
CDH3-201ENST00000264012 FAM47DPA6NHR8 397 aa14.65□□□□□ -0.07
CDH3-201ENST00000264012 EIF3HO15372 352 aaKnown RBP eCLIP14.65□□□□□ -0.07
CDH3-201ENST00000264012 UPP2O95045 317 aa14.65□□□□□ -0.07
CDH3-201ENST00000264012 STAG3L1P0CL83 205 aa14.65□□□□□ -0.07
CDH3-201ENST00000264012 CYP2C8P10632 490 aa14.65□□□□□ -0.07
CDH3-201ENST00000264012 NCAM1P13591 858 aa14.65□□□□□ -0.07
CDH3-201ENST00000264012 RRM1P23921 792 aa14.65□□□□□ -0.07
CDH3-201ENST00000264012 RFC1P35251 1148 aaPredicted RBP14.65□□□□□ -0.07
CDH3-201ENST00000264012 KRT33BQ14525 404 aa14.65□□□□□ -0.07
CDH3-201ENST00000264012 ANO4Q32M45 955 aa14.65□□□□□ -0.07
CDH3-201ENST00000264012 AGR3Q8TD06 166 aa14.65□□□□□ -0.07
CDH3-201ENST00000264012 SLC20A1Q8WUM9 679 aa14.65□□□□□ -0.07
CDH3-201ENST00000264012 KRT35Q92764 455 aa14.65□□□□□ -0.07
CDH3-201ENST00000264012 ZNF512Q96ME7 567 aaPredicted RBP14.65□□□□□ -0.07
CDH3-201ENST00000264012 SEPT5Q99719 369 aaPredicted RBP14.65□□□□□ -0.07
CDH3-201ENST00000264012 EGFL8Q99944 293 aa14.65□□□□□ -0.07
CDH3-201ENST00000264012 WWP1Q9H0M0 922 aa14.65□□□□□ -0.07
CDH3-201ENST00000264012 ECT2Q9H8V3 914 aa14.65□□□□□ -0.07
CDH3-201ENST00000264012 PLSCR1O15162 318 aa14.64□□□□□ -0.07
CDH3-201ENST00000264012 PSMD3O43242 534 aa14.64□□□□□ -0.07
CDH3-201ENST00000264012 CCDC22O60826 627 aa14.64□□□□□ -0.07
CDH3-201ENST00000264012 TGFB3P10600 412 aa14.64□□□□□ -0.07
CDH3-201ENST00000264012 N4BP2L2Q92802 583 aaPredicted RBP14.64□□□□□ -0.07
CDH3-201ENST00000264012 CYFIP2Q96F07 1278 aa14.64□□□□□ -0.07
CDH3-201ENST00000264012 GLT1D1Q96MS3 346 aa14.64□□□□□ -0.07
CDH3-201ENST00000264012 XPO6Q96QU8 1125 aaKnown RBP14.64□□□□□ -0.07
CDH3-201ENST00000264012 OSGEPQ9NPF4 335 aa14.64□□□□□ -0.07
CDH3-201ENST00000264012 SCOCQ9UIL1 159 aa14.64□□□□□ -0.07
CDH3-201ENST00000264012 ARL2BPQ9Y2Y0 163 aa14.64□□□□□ -0.07
CDH3-201ENST00000264012 EML1O00423 815 aa14.64□□□□□ -0.07
CDH3-201ENST00000264012 SPAG6O75602 509 aa14.64□□□□□ -0.07
CDH3-201ENST00000264012 MAPTP10636 758 aaKnown RBP14.64□□□□□ -0.07
CDH3-201ENST00000264012 SREBF2Q12772 1141 aa14.64□□□□□ -0.07
CDH3-201ENST00000264012 NIPA1Q7RTP0 329 aa14.64□□□□□ -0.07
CDH3-201ENST00000264012 KCNK18Q7Z418 384 aa14.64□□□□□ -0.07
CDH3-201ENST00000264012 GIPC2Q8TF65 315 aa14.64□□□□□ -0.07
CDH3-201ENST00000264012 VPS33BQ9H267 617 aa14.64□□□□□ -0.07
CDH3-201ENST00000264012 VDRP11473 427 aa14.64□□□□□ -0.07
CDH3-201ENST00000264012 VEGFAP15692 232 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms