RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 EPHA5P54756 1037 aa13.22□□□□□ -0.29
TRAF4-202ENST00000262396 MTAPQ13126 283 aa13.22□□□□□ -0.29
TRAF4-202ENST00000262396 PTPAQ15257 358 aa13.22□□□□□ -0.29
TRAF4-202ENST00000262396 ARHGAP29Q52LW3 1261 aa13.22□□□□□ -0.29
TRAF4-202ENST00000262396 PRR23BQ6ZRT6 265 aa13.22□□□□□ -0.29
TRAF4-202ENST00000262396 STXBP4Q6ZWJ1 553 aa13.22□□□□□ -0.29
TRAF4-202ENST00000262396 ZNF720Q7Z2F6 126 aa13.22□□□□□ -0.29
TRAF4-202ENST00000262396 DGLUCYQ7Z3D6 616 aa13.22□□□□□ -0.29
TRAF4-202ENST00000262396 ARID3BQ8IVW6 561 aaPredicted RBP13.22□□□□□ -0.29
TRAF4-202ENST00000262396 DCLK2Q8N568 766 aa13.22□□□□□ -0.29
TRAF4-202ENST00000262396 GPR161Q8N6U8 529 aaKnown RBP13.22□□□□□ -0.29
TRAF4-202ENST00000262396 SPPL2BQ8TCT7 592 aa13.22□□□□□ -0.29
TRAF4-202ENST00000262396 C2orf15Q8WU43 125 aaKnown RBP13.22□□□□□ -0.29
TRAF4-202ENST00000262396 PSMG2Q969U7 264 aa13.22□□□□□ -0.29
TRAF4-202ENST00000262396 CLDN23Q96B33 292 aa13.22□□□□□ -0.29
TRAF4-202ENST00000262396 MSANTD3Q96H12 275 aa13.22□□□□□ -0.29
TRAF4-202ENST00000262396 TMEM209Q96SK2 561 aa13.22□□□□□ -0.29
TRAF4-202ENST00000262396 IER2Q9BTL4 223 aa13.22□□□□□ -0.29
TRAF4-202ENST00000262396 FAM126AQ9BYI3 521 aaPredicted RBP13.22□□□□□ -0.29
TRAF4-202ENST00000262396 PANK2Q9BZ23 570 aa13.22□□□□□ -0.29
TRAF4-202ENST00000262396 FOXD4L1Q9NU39 408 aa13.22□□□□□ -0.29
TRAF4-202ENST00000262396 USP18Q9UMW8 372 aa13.22□□□□□ -0.29
TRAF4-202ENST00000262396 DOCK6Q96HP0 2047 aa13.22□□□□□ -0.29
TRAF4-202ENST00000262396 RIF1Q5UIP0 2472 aaKnown RBP13.21□□□□□ -0.29
TRAF4-202ENST00000262396 SLC38A8A6NNN8 435 aa13.21□□□□□ -0.29
TRAF4-202ENST00000262396 KPNA7A9QM74 516 aa13.21□□□□□ -0.29
TRAF4-202ENST00000262396 TISP43B9A030 160 aa13.21□□□□□ -0.29
TRAF4-202ENST00000262396 PIRO00625 290 aa13.21□□□□□ -0.29
TRAF4-202ENST00000262396 CHADO15335 359 aa13.21□□□□□ -0.29
TRAF4-202ENST00000262396 CLSTN1O94985 981 aa13.21□□□□□ -0.29
TRAF4-202ENST00000262396 TMEM191BP0C7N4 346 aa13.21□□□□□ -0.29
TRAF4-202ENST00000262396 AVPR1AP37288 418 aa13.21□□□□□ -0.29
TRAF4-202ENST00000262396 CXCL12P48061 93 aa13.21□□□□□ -0.29
TRAF4-202ENST00000262396 MYL7Q01449 175 aa13.21□□□□□ -0.29
TRAF4-202ENST00000262396 BFSP1Q12934 665 aa13.21□□□□□ -0.29
TRAF4-202ENST00000262396 STK38Q15208 465 aa13.21□□□□□ -0.29
TRAF4-202ENST00000262396 WSCD1Q658N2 575 aa13.21□□□□□ -0.29
TRAF4-202ENST00000262396 SLC39A4Q6P5W5 647 aa13.21□□□□□ -0.29
TRAF4-202ENST00000262396 NT5DC4Q86YG4 428 aa13.21□□□□□ -0.29
TRAF4-202ENST00000262396 CCDC65Q8IXS2 484 aa13.21□□□□□ -0.29
TRAF4-202ENST00000262396 MAML2Q8IZL2 1156 aaPredicted RBP13.21□□□□□ -0.29
TRAF4-202ENST00000262396 SAAL1Q96ER3 474 aa13.21□□□□□ -0.29
TRAF4-202ENST00000262396 LPIN3Q9BQK8 851 aa13.21□□□□□ -0.29
TRAF4-202ENST00000262396 LRRC27Q9C0I9 530 aa13.21□□□□□ -0.29
TRAF4-202ENST00000262396 ST6GALNAC4Q9H4F1 302 aa13.21□□□□□ -0.29
TRAF4-202ENST00000262396 TRPV4Q9HBA0 871 aa13.21□□□□□ -0.29
TRAF4-202ENST00000262396 TRPV5Q9NQA5 729 aa13.21□□□□□ -0.29
TRAF4-202ENST00000262396 RBAKQ9NYW8 714 aaPredicted RBP13.21□□□□□ -0.29
TRAF4-202ENST00000262396 MAGED2Q9UNF1 606 aaPredicted RBP13.21□□□□□ -0.29
TRAF4-202ENST00000262396 AGAP1Q9UPQ3 857 aa13.21□□□□□ -0.29
TRAF4-202ENST00000262396 SMG5Q9UPR3 1016 aaKnown RBP13.21□□□□□ -0.29
TRAF4-202ENST00000262396 PCDHB5Q9Y5E4 795 aa13.21□□□□□ -0.29
TRAF4-202ENST00000262396 SRPRBQ9Y5M8 271 aaKnown RBP13.21□□□□□ -0.29
TRAF4-202ENST00000262396 FAM186AA6NE01 2351 aa13.21□□□□□ -0.3
TRAF4-202ENST00000262396 PRPF40AO75400 957 aaKnown RBP13.2□□□□□ -0.3
TRAF4-202ENST00000262396 MOSPD3O75425 235 aa13.2□□□□□ -0.3
TRAF4-202ENST00000262396 CYP11A1P05108 521 aa13.2□□□□□ -0.3
TRAF4-202ENST00000262396 SDHBP21912 280 aa13.2□□□□□ -0.3
TRAF4-202ENST00000262396 CYP4F8P98187 520 aa13.2□□□□□ -0.3
TRAF4-202ENST00000262396 PLCB2Q00722 1185 aa13.2□□□□□ -0.3
TRAF4-202ENST00000262396 ALCAMQ13740 583 aa13.2□□□□□ -0.3
TRAF4-202ENST00000262396 PUM1Q14671 1186 aaKnown RBP eCLIP13.2□□□□□ -0.3
TRAF4-202ENST00000262396 NFE2Q16621 373 aaPredicted RBP13.2□□□□□ -0.3
TRAF4-202ENST00000262396 STXBP5Q5T5C0 1151 aa13.2□□□□□ -0.3
TRAF4-202ENST00000262396 L1TD1Q5T7N2 865 aaKnown RBP13.2□□□□□ -0.3
TRAF4-202ENST00000262396 CC2D1AQ6P1N0 951 aaPredicted RBP13.2□□□□□ -0.3
TRAF4-202ENST00000262396 USP49Q70CQ1 688 aa13.2□□□□□ -0.3
TRAF4-202ENST00000262396 TMC8Q8IU68 726 aa13.2□□□□□ -0.3
TRAF4-202ENST00000262396 TTC9BQ8N6N2 239 aa13.2□□□□□ -0.3
TRAF4-202ENST00000262396 OR10T2Q8NGX3 314 aa13.2□□□□□ -0.3
TRAF4-202ENST00000262396 BPIFB1Q8TDL5 484 aa13.2□□□□□ -0.3
TRAF4-202ENST00000262396 MRPS31Q92665 395 aaKnown RBP13.2□□□□□ -0.3
TRAF4-202ENST00000262396 KCNN1Q92952 543 aa13.2□□□□□ -0.3
TRAF4-202ENST00000262396 CLIC6Q96NY7 704 aa13.2□□□□□ -0.3
TRAF4-202ENST00000262396 ZCWPW1Q9H0M4 648 aa13.2□□□□□ -0.3
TRAF4-202ENST00000262396 DNAJC25Q9H1X3 360 aa13.2□□□□□ -0.3
TRAF4-202ENST00000262396 CHRDQ9H2X0 955 aa13.2□□□□□ -0.3
TRAF4-202ENST00000262396 CRISPLD1Q9H336 500 aa13.2□□□□□ -0.3
TRAF4-202ENST00000262396 TASP1Q9H6P5 420 aa13.2□□□□□ -0.3
TRAF4-202ENST00000262396 TMEM206Q9H813 350 aa13.2□□□□□ -0.3
TRAF4-202ENST00000262396 PANK4Q9NVE7 773 aa13.2□□□□□ -0.3
TRAF4-202ENST00000262396 HSFX1Q9UBD0 423 aa13.2□□□□□ -0.3
TRAF4-202ENST00000262396 ANO9A1A5B4 782 aa13.19□□□□□ -0.3
TRAF4-202ENST00000262396 GOLGA8IPA6NC78 632 aa13.19□□□□□ -0.3
TRAF4-202ENST00000262396 MYMKA6NI61 221 aa13.19□□□□□ -0.3
TRAF4-202ENST00000262396 GOLGA8JA6NMD2 632 aa13.19□□□□□ -0.3
TRAF4-202ENST00000262396 FAM189A1O60320 539 aa13.19□□□□□ -0.3
TRAF4-202ENST00000262396 ITGB3P05106 788 aa13.19□□□□□ -0.3
TRAF4-202ENST00000262396 ADRB2P07550 413 aa13.19□□□□□ -0.3
TRAF4-202ENST00000262396 HSP90AA1P07900 732 aaKnown RBP13.19□□□□□ -0.3
TRAF4-202ENST00000262396 POLR2BP30876 1174 aaKnown RBP13.19□□□□□ -0.3
TRAF4-202ENST00000262396 RPL10AP62906 217 aaKnown RBP13.19□□□□□ -0.3
TRAF4-202ENST00000262396 AMPD2Q01433 879 aa13.19□□□□□ -0.3
TRAF4-202ENST00000262396 POU5F1Q01860 360 aaKnown RBP13.19□□□□□ -0.3
TRAF4-202ENST00000262396 LPAL2Q16609 132 aa13.19□□□□□ -0.3
TRAF4-202ENST00000262396 FAM173BQ6P4H8 233 aa13.19□□□□□ -0.3
TRAF4-202ENST00000262396 CEP68Q76N32 757 aa13.19□□□□□ -0.3
TRAF4-202ENST00000262396 CSGALNACT2Q8N6G5 542 aa13.19□□□□□ -0.3
TRAF4-202ENST00000262396 CELF5Q8N6W0 485 aaKnown RBP13.19□□□□□ -0.3
TRAF4-202ENST00000262396 PDILTQ8N807 584 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms