RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 ZNF263O14978 683 aa14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 TLL1O43897 1013 aa14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 ACSL3O95573 720 aa14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 RHOCP08134 193 aa14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 GFAPP14136 432 aa14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 FXR2P51116 673 aaKnown RBP eCLIP14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 MTFR1Q15390 333 aa14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 FAM171A1Q5VUB5 890 aa14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 FKBP1CQ5VVH2 108 aa14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 TRAIPQ9BWF2 469 aa14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 STK33Q9BYT3 514 aa14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 VPS9D1Q9Y2B5 631 aa14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 PITPNM2Q9BZ72 1349 aa14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 ARHGAP23Q9P227 1491 aa14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 DDTLA6NHG4 134 aaPredicted RBP14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 P4HA2O15460 535 aa14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 WEE2P0C1S8 567 aa14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 WDR75Q8IWA0 830 aaKnown RBP14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 CLMNQ96JQ2 1002 aa14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 MRPL40Q9NQ50 206 aaKnown RBP14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 A0A087WZ62 844 aa14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 SPTLC1O15269 473 aa14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 POMCP01189 267 aa14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 PYGBP11216 843 aa14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 DPYDQ12882 1025 aa14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 KRT72Q14CN4 511 aa14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 E4F1Q66K89 784 aaPredicted RBP14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 PPM1NQ8N819 430 aa14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 ABHD8Q96I13 439 aa14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 WNK4Q96J92 1243 aa14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 UBXN6Q9BZV1 441 aa14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 NDEL1Q9GZM8 345 aa14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 VPS28Q9UK41 221 aa14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 SLC12A8A0AV02 714 aa14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 HIRAP54198 1017 aaPredicted RBP14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 MMS22LQ6ZRQ5 1243 aa14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 HDAC6Q9UBN7 1215 aa14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 TTC7AQ9ULT0 858 aaPredicted RBP14.22□□□□□ -0.13
PDGFRB-201ENST00000261799 ADCY6O43306 1168 aa14.21□□□□□ -0.13
PDGFRB-201ENST00000261799 VIL1P09327 827 aaKnown RBP14.21□□□□□ -0.13
PDGFRB-201ENST00000261799 PGM5Q15124 567 aa14.21□□□□□ -0.13
PDGFRB-201ENST00000261799 ATP8B4Q8TF62 1192 aa14.21□□□□□ -0.13
PDGFRB-201ENST00000261799 TTC17Q96AE7 1141 aa14.21□□□□□ -0.13
PDGFRB-201ENST00000261799 ACSF2Q96CM8 615 aaPredicted RBP14.21□□□□□ -0.13
PDGFRB-201ENST00000261799 MED4Q9NPJ6 270 aa14.21□□□□□ -0.13
PDGFRB-201ENST00000261799 CD274Q9NZQ7 290 aa14.21□□□□□ -0.13
PDGFRB-201ENST00000261799 KIF17Q9P2E2 1029 aa14.21□□□□□ -0.13
PDGFRB-201ENST00000261799 KIF1AQ12756 1690 aa14.21□□□□□ -0.13
PDGFRB-201ENST00000261799 CNTNAP5Q8WYK1 1306 aa14.21□□□□□ -0.13
PDGFRB-201ENST00000261799 C2orf81A6NN90 581 aa14.21□□□□□ -0.13
PDGFRB-201ENST00000261799 SUPT3HO75486 399 aa14.21□□□□□ -0.13
PDGFRB-201ENST00000261799 NPEPPSP55786 919 aa14.21□□□□□ -0.13
PDGFRB-201ENST00000261799 EFEMP1Q12805 493 aa14.21□□□□□ -0.13
PDGFRB-201ENST00000261799 PDIA2Q13087 525 aaKnown RBP14.21□□□□□ -0.13
PDGFRB-201ENST00000261799 MAP2K5Q13163 448 aa14.21□□□□□ -0.13
PDGFRB-201ENST00000261799 UGP2Q16851 508 aa14.21□□□□□ -0.13
PDGFRB-201ENST00000261799 PHACTR4Q8IZ21 702 aa14.21□□□□□ -0.13
PDGFRB-201ENST00000261799 RFFLQ8WZ73 363 aa14.21□□□□□ -0.13
PDGFRB-201ENST00000261799 C1QTNF7Q9BXJ2 289 aa14.21□□□□□ -0.13
PDGFRB-201ENST00000261799 KIAA1257Q9ULG3 409 aa14.21□□□□□ -0.13
PDGFRB-201ENST00000261799 MZF1P28698 734 aaPredicted RBP14.21□□□□□ -0.13
PDGFRB-201ENST00000261799 WEE1P30291 646 aa14.21□□□□□ -0.13
PDGFRB-201ENST00000261799 FNDC3BQ53EP0 1204 aaKnown RBP14.21□□□□□ -0.13
PDGFRB-201ENST00000261799 TIGD7Q6NT04 549 aaPredicted RBP14.21□□□□□ -0.13
PDGFRB-201ENST00000261799 RGL4Q8IZJ4 473 aa14.21□□□□□ -0.13
PDGFRB-201ENST00000261799 PTPRN2Q92932 1015 aa14.21□□□□□ -0.13
PDGFRB-201ENST00000261799 METTL5Q9NRN9 209 aaKnown RBP14.21□□□□□ -0.13
PDGFRB-201ENST00000261799 ABHD10Q9NUJ1 306 aa14.21□□□□□ -0.13
PDGFRB-201ENST00000261799 RTN3O95197 1032 aaPredicted RBP14.21□□□□□ -0.14
PDGFRB-201ENST00000261799 HPCAP84074 193 aa14.21□□□□□ -0.14
PDGFRB-201ENST00000261799 TP53BP2Q13625 1128 aa14.21□□□□□ -0.14
PDGFRB-201ENST00000261799 TRADDQ15628 312 aa14.21□□□□□ -0.14
PDGFRB-201ENST00000261799 TMCO4Q5TGY1 634 aa14.21□□□□□ -0.14
PDGFRB-201ENST00000261799 GPAT2Q6NUI2 795 aa14.21□□□□□ -0.14
PDGFRB-201ENST00000261799 MOXD1Q6UVY6 613 aa14.21□□□□□ -0.14
PDGFRB-201ENST00000261799 PATL1Q86TB9 770 aaKnown RBP14.21□□□□□ -0.14
PDGFRB-201ENST00000261799 MIB1Q86YT6 1006 aa14.21□□□□□ -0.14
PDGFRB-201ENST00000261799 DAGLBQ8NCG7 672 aa14.21□□□□□ -0.14
PDGFRB-201ENST00000261799 CCDC197Q8NCU1 140 aa14.21□□□□□ -0.14
PDGFRB-201ENST00000261799 C6orf203Q9P0P8 240 aaPredicted RBP14.21□□□□□ -0.14
PDGFRB-201ENST00000261799 GNRH1P01148 92 aa14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 GTF2H1P32780 548 aa14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 CAPZA2P47755 286 aa14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 UROC1Q96N76 676 aa14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 FTHL17Q9BXU8 183 aa14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 TRIM55Q9BYV6 548 aa14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 FBXO44Q9H4M3 255 aa14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 LLGL2Q6P1M3 1020 aa14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 ZNF557Q8N988 423 aaPredicted RBP14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 ATP11CQ8NB49 1132 aa14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 AGAP3Q96P47 875 aa14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 FDXACB1Q9BRP7 624 aaPredicted RBP14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 NLNQ9BYT8 704 aa14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 UVRAGQ9P2Y5 699 aa14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 APOBEC2Q9Y235 224 aaKnown RBP14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 IQGAP1P46940 1657 aa14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 SPECC1L-ADORA2AF8WAN1 911 aa14.2□□□□□ -0.14
PDGFRB-201ENST00000261799 GRAP2O75791 330 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms