RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 PDE12Q6L8Q7 609 aaKnown RBP4.23□□□□□ -1.73
RNF38-201ENST00000259605 MSL3Q8N5Y2 521 aaKnown RBP4.23□□□□□ -1.73
RNF38-201ENST00000259605 POMGNT2Q8NAT1 580 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 CELF1Q92879 486 aaKnown RBP4.23□□□□□ -1.73
RNF38-201ENST00000259605 UPF1Q92900 1129 aaKnown RBP eCLIP4.23□□□□□ -1.73
RNF38-201ENST00000259605 PAGE5Q96GU1 130 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 DHTKD1Q96HY7 919 aaPredicted RBP4.23□□□□□ -1.73
RNF38-201ENST00000259605 PLEKHA8Q96JA3 519 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 TBC1D32Q96NH3 1257 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 MYL10Q9BUA6 226 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 OSBPL10Q9BXB5 764 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 TTYH1Q9H313 450 aaPredicted RBP4.23□□□□□ -1.73
RNF38-201ENST00000259605 PCIF1Q9H4Z3 704 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 Q9H521 79 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 TAF1DQ9H5J8 278 aaPredicted RBP4.23□□□□□ -1.73
RNF38-201ENST00000259605 TUT1Q9H6E5 874 aaKnown RBP4.23□□□□□ -1.73
RNF38-201ENST00000259605 RSAD1Q9HA92 442 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 CREBZFQ9NS37 354 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 SPATA6Q9NWH7 488 aaPredicted RBP4.23□□□□□ -1.73
RNF38-201ENST00000259605 KCND2Q9NZV8 630 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 TRIM10Q9UDY6 481 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 INSL6Q9Y581 213 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 MAP3K1Q13233 1512 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 CLASP1Q7Z460 1538 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 NUP153P49790 1475 aaKnown RBP4.23□□□□□ -1.73
RNF38-201ENST00000259605 A0A0J9YVX5 310 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 ZSCAN5CA6NGD5 496 aaPredicted RBP4.23□□□□□ -1.73
RNF38-201ENST00000259605 ESPNB1AK53 854 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 BUB1O43683 1085 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 PEX14O75381 377 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 TJP3O95049 919 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 USP17L7P0C7H9 530 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 JMJD7P0C870 316 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 ADORA2AP29274 412 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 WEE1P30291 646 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 TLX1P31314 330 aaPredicted RBP4.23□□□□□ -1.73
RNF38-201ENST00000259605 CENPAP49450 140 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 MARSP56192 900 aaKnown RBP4.23□□□□□ -1.73
RNF38-201ENST00000259605 SNRPFP62306 86 aaKnown RBP4.23□□□□□ -1.73
RNF38-201ENST00000259605 CTTNQ14247 550 aaKnown RBP4.23□□□□□ -1.73
RNF38-201ENST00000259605 SLC9A5Q14940 896 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 SLMAPQ14BN4 828 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 SGSM1Q2NKQ1 1148 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 ZC2HC1CQ53FD0 456 aaPredicted RBP4.23□□□□□ -1.73
RNF38-201ENST00000259605 C10orf76Q5T2E6 689 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 ANKRD40Q6AI12 368 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 C11orf88Q6PI97 169 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 KLHL24Q6TFL4 600 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 TAGAPQ8N103 731 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 MARCH10Q8NA82 808 aaPredicted RBP4.23□□□□□ -1.73
RNF38-201ENST00000259605 KLHDC4Q8TBB5 520 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 BTN2A2Q8WVV5 523 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 ATG4CQ96DT6 458 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 IRX2Q9BZI1 471 aaPredicted RBP4.23□□□□□ -1.73
RNF38-201ENST00000259605 KCNN2Q9H2S1 579 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 ZFP14Q9HCL3 533 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 GULP1Q9UBP9 304 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 SUCOQ9UBS9 1254 aaKnown RBP4.23□□□□□ -1.73
RNF38-201ENST00000259605 CNOT8Q9UFF9 292 aaKnown RBP4.23□□□□□ -1.73
RNF38-201ENST00000259605 KIAA1257Q9ULG3 409 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 KCNJ14Q9UNX9 436 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 POLR1DQ9Y2S0 133 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 FAM32AQ9Y421 112 aaKnown RBP4.23□□□□□ -1.73
RNF38-201ENST00000259605 DAGLAQ9Y4D2 1042 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 TSPOAP1O95153 1857 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 RASSF10A6NK89 507 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 QSOX1O00391 747 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 KPNA3O00505 521 aaPredicted RBP4.23□□□□□ -1.73
RNF38-201ENST00000259605 TRIM66O15016 1216 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 CFLARO15519 480 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 ENO2P09104 434 aaPredicted RBP4.23□□□□□ -1.73
RNF38-201ENST00000259605 CLTBP09497 229 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 MYBL1P10243 752 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 GHRP10912 638 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 VARSP26640 1264 aaKnown RBP4.23□□□□□ -1.73
RNF38-201ENST00000259605 CDC27P30260 824 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 SULT1E1P49888 294 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 BLVRAP53004 296 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 BASP1P80723 227 aaKnown RBP4.23□□□□□ -1.73
RNF38-201ENST00000259605 KCNA1Q09470 495 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 NDUFA9Q16795 377 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 FAM110CQ1W6H9 321 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 LRRC24Q50LG9 513 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 ANKRD20A2Q5SQ80 823 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 GET4Q7L5D6 327 aaPredicted RBP4.23□□□□□ -1.73
RNF38-201ENST00000259605 ZNF410Q86VK4 478 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 FAM13CQ8NE31 585 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 OR8D1Q8WZ84 308 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 NCLNQ969V3 563 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 TINF2Q9BSI4 451 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 ADGRE3Q9BY15 652 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 DNAJC25Q9H1X3 360 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 C17orf75Q9HAS0 396 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 MRPL40Q9NQ50 206 aaKnown RBP4.23□□□□□ -1.73
RNF38-201ENST00000259605 EMILIN3Q9NT22 766 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 RRN3Q9NYV6 651 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 ADAM22Q9P0K1 906 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 DEC1Q9P2X7 70 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 ERVW-1Q9UQF0 538 aa4.23□□□□□ -1.73
RNF38-201ENST00000259605 TBC1D3DA0A087WVF3 549 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms