RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 SPON2Q9BUD6 331 aa15.75■□□□□ 0.11
UBE4B-201ENST00000253251 DUOX1Q9NRD9 1551 aa15.74■□□□□ 0.11
UBE4B-201ENST00000253251 PI4K2BG5E9Z4 385 aa15.74■□□□□ 0.11
UBE4B-201ENST00000253251 AGTP01019 485 aa15.74■□□□□ 0.11
UBE4B-201ENST00000253251 SSTR3P32745 418 aaPredicted RBP15.74■□□□□ 0.11
UBE4B-201ENST00000253251 PMS1P54277 932 aaKnown RBP15.74■□□□□ 0.11
UBE4B-201ENST00000253251 KIRREL3Q8IZU9 778 aa15.74■□□□□ 0.11
UBE4B-201ENST00000253251 PPM1NQ8N819 430 aa15.74■□□□□ 0.11
UBE4B-201ENST00000253251 TRIM55Q9BYV6 548 aa15.74■□□□□ 0.11
UBE4B-201ENST00000253251 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.74■□□□□ 0.112e-7■■□□□ 14
UBE4B-201ENST00000253251 BAIAP2L1Q9UHR4 511 aa15.74■□□□□ 0.11
UBE4B-201ENST00000253251 PCDHB8Q9UN66 801 aa15.74■□□□□ 0.11
UBE4B-201ENST00000253251 UGP2Q16851 508 aa15.74■□□□□ 0.11
UBE4B-201ENST00000253251 PAPD7Q5XG87 772 aaKnown RBP15.74■□□□□ 0.11
UBE4B-201ENST00000253251 C11orf63Q6NUN7 778 aa15.74■□□□□ 0.11
UBE4B-201ENST00000253251 GDAP1Q8TB36 358 aa15.74■□□□□ 0.11
UBE4B-201ENST00000253251 ERP44Q9BS26 406 aa15.74■□□□□ 0.11
UBE4B-201ENST00000253251 STARD7Q9NQZ5 370 aa15.74■□□□□ 0.11
UBE4B-201ENST00000253251 METTL5Q9NRN9 209 aaKnown RBP15.74■□□□□ 0.11
UBE4B-201ENST00000253251 PCDHAC2Q9Y5I4 1007 aa15.74■□□□□ 0.11
UBE4B-201ENST00000253251 IGKV6D-41A0A0C4DH26 115 aa15.74■□□□□ 0.11
UBE4B-201ENST00000253251 YDJCA8MPS7 323 aa15.74■□□□□ 0.11
UBE4B-201ENST00000253251 SLC4A1P02730 911 aa15.74■□□□□ 0.11
UBE4B-201ENST00000253251 IFT88Q13099 833 aa15.74■□□□□ 0.11
UBE4B-201ENST00000253251 TBX2Q13207 712 aaPredicted RBP15.74■□□□□ 0.11
UBE4B-201ENST00000253251 NFE2Q16621 373 aaPredicted RBP15.74■□□□□ 0.11
UBE4B-201ENST00000253251 ATPAF2Q8N5M1 289 aa15.74■□□□□ 0.11
UBE4B-201ENST00000253251 PARD3BQ8TEW8 1205 aa15.74■□□□□ 0.11
UBE4B-201ENST00000253251 ALKBH8Q96BT7 664 aaKnown RBP15.74■□□□□ 0.11
UBE4B-201ENST00000253251 TMEM176AQ96HP8 235 aa15.74■□□□□ 0.11
UBE4B-201ENST00000253251 HSD17B14Q9BPX1 270 aa15.74■□□□□ 0.11
UBE4B-201ENST00000253251 ISCUQ9H1K1 167 aa15.74■□□□□ 0.11
UBE4B-201ENST00000253251 CISHQ9NSE2 258 aa15.74■□□□□ 0.11
UBE4B-201ENST00000253251 SETD4Q9NVD3 440 aa15.74■□□□□ 0.11
UBE4B-201ENST00000253251 USH1CQ9Y6N9 552 aa15.74■□□□□ 0.11
UBE4B-201ENST00000253251 ZNF185O15231 689 aa15.74■□□□□ 0.11
UBE4B-201ENST00000253251 LGALS2P05162 132 aa15.74■□□□□ 0.11
UBE4B-201ENST00000253251 SERPINB9P50453 376 aa15.74■□□□□ 0.11
UBE4B-201ENST00000253251 PTPN11Q06124 597 aaPredicted RBP15.74■□□□□ 0.11
UBE4B-201ENST00000253251 TMEM132BQ14DG7 1078 aa15.74■□□□□ 0.11
UBE4B-201ENST00000253251 KCNK18Q7Z418 384 aa15.74■□□□□ 0.11
UBE4B-201ENST00000253251 PITPNM3Q9BZ71 974 aa15.74■□□□□ 0.11
UBE4B-201ENST00000253251 NUF2Q9BZD4 464 aa15.74■□□□□ 0.11
UBE4B-201ENST00000253251 FAM8A1Q9UBU6 413 aa15.74■□□□□ 0.11
UBE4B-201ENST00000253251 MAGED2Q9UNF1 606 aaPredicted RBP15.74■□□□□ 0.11
UBE4B-201ENST00000253251 EGFRP00533 1210 aa15.73■□□□□ 0.11
UBE4B-201ENST00000253251 PAEPP09466 180 aa15.73■□□□□ 0.11
UBE4B-201ENST00000253251 SLC8A1P32418 973 aa15.73■□□□□ 0.11
UBE4B-201ENST00000253251 PRAMEP78395 509 aa15.73■□□□□ 0.11
UBE4B-201ENST00000253251 MTA1Q13330 715 aa15.73■□□□□ 0.11
UBE4B-201ENST00000253251 FBXO47Q5MNV8 452 aa15.73■□□□□ 0.11
UBE4B-201ENST00000253251 CHADLQ6NUI6 762 aa15.73■□□□□ 0.11
UBE4B-201ENST00000253251 ABRAQ8N0Z2 381 aa15.73■□□□□ 0.11
UBE4B-201ENST00000253251 MCUQ8NE86 351 aa15.73■□□□□ 0.11
UBE4B-201ENST00000253251 UBA3Q8TBC4 463 aa15.73■□□□□ 0.11
UBE4B-201ENST00000253251 ROPN1BQ9BZX4 212 aaPredicted RBP15.73■□□□□ 0.11
UBE4B-201ENST00000253251 ROPN1Q9HAT0 212 aaPredicted RBP15.73■□□□□ 0.11
UBE4B-201ENST00000253251 RBM12Q9NTZ6 932 aaKnown RBP15.73■□□□□ 0.11
UBE4B-201ENST00000253251 FGFR1OP2Q9NVK5 253 aa15.73■□□□□ 0.11
UBE4B-201ENST00000253251 NSMCE4AQ9NXX6 385 aa15.73■□□□□ 0.11
UBE4B-201ENST00000253251 NRCAMQ92823 1304 aa15.73■□□□□ 0.11
UBE4B-201ENST00000253251 CDH16O75309 829 aa15.73■□□□□ 0.11
UBE4B-201ENST00000253251 B3GAT3O94766 335 aa15.73■□□□□ 0.11
UBE4B-201ENST00000253251 MAGOHP61326 146 aaKnown RBP15.73■□□□□ 0.11
UBE4B-201ENST00000253251 BMT2Q1RMZ1 405 aa15.73■□□□□ 0.11
UBE4B-201ENST00000253251 CLEC16AQ2KHT3 1053 aa15.73■□□□□ 0.11
UBE4B-201ENST00000253251 ZDHHC17Q8IUH5 632 aa15.73■□□□□ 0.11
UBE4B-201ENST00000253251 ADGRF2Q8IZF7 708 aa15.73■□□□□ 0.11
UBE4B-201ENST00000253251 GRAMD1AQ96CP6 724 aa15.73■□□□□ 0.11
UBE4B-201ENST00000253251 ARHGAP20Q9P2F6 1191 aa15.73■□□□□ 0.11
UBE4B-201ENST00000253251 GOLGA8MH3BSY2 632 aa15.73■□□□□ 0.11
UBE4B-201ENST00000253251 CYB561D2O14569 222 aa15.73■□□□□ 0.11
UBE4B-201ENST00000253251 BRAFP15056 766 aa15.73■□□□□ 0.11
UBE4B-201ENST00000253251 TAL1P17542 331 aaPredicted RBP15.73■□□□□ 0.11
UBE4B-201ENST00000253251 ALDH7A1P49419 539 aaKnown RBP15.73■□□□□ 0.11
UBE4B-201ENST00000253251 RPL10AP62906 217 aaKnown RBP15.73■□□□□ 0.11
UBE4B-201ENST00000253251 DCAF6Q58WW2 860 aa15.73■□□□□ 0.11
UBE4B-201ENST00000253251 NUGGCQ68CJ6 796 aa15.73■□□□□ 0.11
UBE4B-201ENST00000253251 TTC19Q6DKK2 380 aaPredicted RBP15.73■□□□□ 0.11
UBE4B-201ENST00000253251 CDR2LQ86X02 465 aaPredicted RBP15.73■□□□□ 0.11
UBE4B-201ENST00000253251 HNRNPLLQ8WVV9 542 aaKnown RBP15.73■□□□□ 0.11
UBE4B-201ENST00000253251 DNAJC19Q96DA6 116 aa15.73■□□□□ 0.11
UBE4B-201ENST00000253251 RRN3Q9NYV6 651 aa15.73■□□□□ 0.11
UBE4B-201ENST00000253251 BARX2Q9UMQ3 279 aaPredicted RBP15.73■□□□□ 0.11
UBE4B-201ENST00000253251 SMG5Q9UPR3 1016 aaKnown RBP15.73■□□□□ 0.11
UBE4B-201ENST00000253251 GLTPD2A6NH11 291 aa15.72■□□□□ 0.11
UBE4B-201ENST00000253251 KLRC4O43908 158 aa15.72■□□□□ 0.11
UBE4B-201ENST00000253251 ZNF286BP0CG31 522 aa15.72■□□□□ 0.11
UBE4B-201ENST00000253251 MYL6P60660 151 aa15.72■□□□□ 0.11
UBE4B-201ENST00000253251 TDRD10Q5VZ19 366 aaKnown RBP15.72■□□□□ 0.11
UBE4B-201ENST00000253251 RIBC1Q8N443 379 aaPredicted RBP15.72■□□□□ 0.11
UBE4B-201ENST00000253251 PPHLN1Q8NEY8 458 aaKnown RBP15.72■□□□□ 0.11
UBE4B-201ENST00000253251 MS4A14Q96JA4 679 aa15.72■□□□□ 0.11
UBE4B-201ENST00000253251 STK38LQ9Y2H1 464 aa15.72■□□□□ 0.11
UBE4B-201ENST00000253251 DFFAO00273 331 aa15.72■□□□□ 0.11
UBE4B-201ENST00000253251 CST8O60676 142 aa15.72■□□□□ 0.11
UBE4B-201ENST00000253251 ATP5HO75947 161 aa15.72■□□□□ 0.11
UBE4B-201ENST00000253251 HSPA4LO95757 839 aa15.72■□□□□ 0.11
UBE4B-201ENST00000253251 TFRCP02786 760 aaKnown RBP15.72■□□□□ 0.11
UBE4B-201ENST00000253251 PLEKP08567 350 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms