RNA–Protein interactions for RNA: ENST00000251654.8

PCCB-201, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCCB, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-201ENST00000251654 CHST12Q9NRB3 414 aa18.37■□□□□ 0.53
PCCB-201ENST00000251654 RBM12Q9NTZ6 932 aaKnown RBP18.37■□□□□ 0.53
PCCB-201ENST00000251654 FAM105AQ9NUU6 356 aa18.37■□□□□ 0.53
PCCB-201ENST00000251654 BARX2Q9UMQ3 279 aaPredicted RBP18.37■□□□□ 0.53
PCCB-201ENST00000251654 PIRO00625 290 aa18.36■□□□□ 0.53
PCCB-201ENST00000251654 CD19P15391 556 aa18.36■□□□□ 0.53
PCCB-201ENST00000251654 COMTP21964 271 aa18.36■□□□□ 0.53
PCCB-201ENST00000251654 CLCN6P51797 869 aa18.36■□□□□ 0.53
PCCB-201ENST00000251654 SOX4Q06945 474 aaPredicted RBP18.36■□□□□ 0.53
PCCB-201ENST00000251654 FBXO47Q5MNV8 452 aa18.36■□□□□ 0.53
PCCB-201ENST00000251654 PLEKHA7Q6IQ23 1121 aa18.36■□□□□ 0.53
PCCB-201ENST00000251654 RASGEF1CQ8N431 466 aa18.36■□□□□ 0.53
PCCB-201ENST00000251654 USP38Q8NB14 1042 aa18.36■□□□□ 0.53
PCCB-201ENST00000251654 TMEM35BQ8NCS4 154 aa18.36■□□□□ 0.53
PCCB-201ENST00000251654 ALG3Q92685 438 aa18.36■□□□□ 0.53
PCCB-201ENST00000251654 TMEM176AQ96HP8 235 aa18.36■□□□□ 0.53
PCCB-201ENST00000251654 CARD9Q9H257 536 aa18.36■□□□□ 0.53
PCCB-201ENST00000251654 HMX1Q9NP08 348 aaPredicted RBP18.36■□□□□ 0.53
PCCB-201ENST00000251654 RNF216Q9NWF9 866 aaPredicted RBP18.36■□□□□ 0.53
PCCB-201ENST00000251654 ANAPC7Q9UJX3 599 aa18.36■□□□□ 0.53
PCCB-201ENST00000251654 RAB21Q9UL25 225 aa18.36■□□□□ 0.53
PCCB-201ENST00000251654 MEIS3P2A8K0S8 358 aa18.35■□□□□ 0.53
PCCB-201ENST00000251654 TMEM110-MUSTN1A8MSY1 372 aa18.35■□□□□ 0.53
PCCB-201ENST00000251654 MIF4GDA9UHW6 222 aaKnown RBP18.35■□□□□ 0.53
PCCB-201ENST00000251654 PTGESO14684 152 aa18.35■□□□□ 0.53
PCCB-201ENST00000251654 TLR3O15455 904 aaKnown RBP18.35■□□□□ 0.53
PCCB-201ENST00000251654 CD4P01730 458 aa18.35■□□□□ 0.53
PCCB-201ENST00000251654 GRK4P32298 578 aa18.35■□□□□ 0.53
PCCB-201ENST00000251654 PRMT2P55345 433 aa18.35■□□□□ 0.53
PCCB-201ENST00000251654 PHLDB2Q86SQ0 1253 aa18.35■□□□□ 0.53
PCCB-201ENST00000251654 CPNE8Q86YQ8 564 aa18.35■□□□□ 0.53
PCCB-201ENST00000251654 TTC39CQ8N584 583 aa18.35■□□□□ 0.53
PCCB-201ENST00000251654 GLT1D1Q96MS3 346 aa18.35■□□□□ 0.53
PCCB-201ENST00000251654 TSEN34Q9BSV6 310 aaKnown RBP18.35■□□□□ 0.53
PCCB-201ENST00000251654 LHX5Q9H2C1 402 aa18.35■□□□□ 0.53
PCCB-201ENST00000251654 ERVK-5Q9HDB9 667 aa18.35■□□□□ 0.53
PCCB-201ENST00000251654 TMEM59LQ9UK28 342 aa18.35■□□□□ 0.53
PCCB-201ENST00000251654 SNX9Q9Y5X1 595 aa18.35■□□□□ 0.53
PCCB-201ENST00000251654 GPR182O15218 404 aa18.35■□□□□ 0.53
PCCB-201ENST00000251654 MED7O43513 233 aa18.35■□□□□ 0.53
PCCB-201ENST00000251654 CEP104O60308 925 aa18.35■□□□□ 0.53
PCCB-201ENST00000251654 CYP3A5P20815 502 aa18.35■□□□□ 0.53
PCCB-201ENST00000251654 MARCKSL1P49006 195 aa18.35■□□□□ 0.53
PCCB-201ENST00000251654 NDST1P52848 882 aa18.35■□□□□ 0.53
PCCB-201ENST00000251654 MAMLD1Q13495 774 aa18.35■□□□□ 0.53
PCCB-201ENST00000251654 ARHGEF6Q15052 776 aa18.35■□□□□ 0.53
PCCB-201ENST00000251654 LIN9Q5TKA1 542 aa18.35■□□□□ 0.53
PCCB-201ENST00000251654 DENND1BQ6P3S1 775 aa18.35■□□□□ 0.53
PCCB-201ENST00000251654 UBE2Q2Q8WVN8 375 aa18.35■□□□□ 0.53
PCCB-201ENST00000251654 KRT35Q92764 455 aa18.35■□□□□ 0.53
PCCB-201ENST00000251654 ZFP42Q96MM3 310 aa18.35■□□□□ 0.53
PCCB-201ENST00000251654 GOLGA2P5Q9HBQ8 144 aa18.35■□□□□ 0.53
PCCB-201ENST00000251654 PADI3Q9ULW8 664 aa18.35■□□□□ 0.53
PCCB-201ENST00000251654 PTCH2Q9Y6C5 1203 aa18.35■□□□□ 0.53
PCCB-201ENST00000251654 TCRBV5S1A1TA0A578 114 aa18.34■□□□□ 0.53
PCCB-201ENST00000251654 PGRMC1O00264 195 aaKnown RBP18.34■□□□□ 0.53
PCCB-201ENST00000251654 XPOTO43592 962 aaKnown RBP18.34■□□□□ 0.53
PCCB-201ENST00000251654 GHRP10912 638 aa18.34■□□□□ 0.53
PCCB-201ENST00000251654 CD52P31358 61 aa18.34■□□□□ 0.53
PCCB-201ENST00000251654 RNASE9P60153 205 aaKnown RBP18.34■□□□□ 0.53
PCCB-201ENST00000251654 LPIN1Q14693 890 aa18.34■□□□□ 0.53
PCCB-201ENST00000251654 FAM26DQ5JW98 314 aa18.34■□□□□ 0.53
PCCB-201ENST00000251654 GSTCDQ8NEC7 633 aa18.34■□□□□ 0.53
PCCB-201ENST00000251654 PPP1R10Q96QC0 940 aaKnown RBP18.34■□□□□ 0.53
PCCB-201ENST00000251654 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.34■□□□□ 0.532e-7■■□□□ 14
PCCB-201ENST00000251654 MRPL45Q9BRJ2 306 aaKnown RBP18.34■□□□□ 0.53
PCCB-201ENST00000251654 SELENOOQ9BVL4 669 aa18.34■□□□□ 0.53
PCCB-201ENST00000251654 CYTH4Q9UIA0 394 aa18.34■□□□□ 0.53
PCCB-201ENST00000251654 TTC7AQ9ULT0 858 aaPredicted RBP18.34■□□□□ 0.53
PCCB-201ENST00000251654 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.34■□□□□ 0.53
PCCB-201ENST00000251654 NOD1Q9Y239 953 aa18.34■□□□□ 0.53
PCCB-201ENST00000251654 CEP83Q9Y592 693 aa18.34■□□□□ 0.53
PCCB-201ENST00000251654 A0A1W2PQ45 241 aaPredicted RBP18.33■□□□□ 0.53
PCCB-201ENST00000251654 A0A1W2PQY0 241 aa18.33■□□□□ 0.53
PCCB-201ENST00000251654 O00370 1275 aa18.33■□□□□ 0.53
PCCB-201ENST00000251654 CTNNA1P35221 906 aaKnown RBP18.33■□□□□ 0.53
PCCB-201ENST00000251654 PEX5P50542 639 aa18.33■□□□□ 0.53
PCCB-201ENST00000251654 TRAIPQ9BWF2 469 aa18.33■□□□□ 0.53
PCCB-201ENST00000251654 NT5C1AQ9BXI3 368 aa18.33■□□□□ 0.53
PCCB-201ENST00000251654 MRPL47Q9HD33 250 aaKnown RBP18.33■□□□□ 0.53
PCCB-201ENST00000251654 PARVAQ9NVD7 372 aa18.33■□□□□ 0.53
PCCB-201ENST00000251654 ARGLU1Q9NWB6 273 aaPredicted RBP18.33■□□□□ 0.53
PCCB-201ENST00000251654 ZNF446Q9NWS9 450 aa18.33■□□□□ 0.53
PCCB-201ENST00000251654 NME7Q9Y5B8 376 aa18.33■□□□□ 0.53
PCCB-201ENST00000251654 SCINQ9Y6U3 715 aa18.33■□□□□ 0.53
PCCB-201ENST00000251654 TARSL2A2RTX5 802 aaKnown RBP18.33■□□□□ 0.52
PCCB-201ENST00000251654 CCDC151A5D8V7 595 aa18.33■□□□□ 0.52
PCCB-201ENST00000251654 SPTLC1O15269 473 aa18.33■□□□□ 0.52
PCCB-201ENST00000251654 MGEA5O60502 916 aa18.33■□□□□ 0.52
PCCB-201ENST00000251654 CALB1P05937 261 aa18.33■□□□□ 0.52
PCCB-201ENST00000251654 VDRP11473 427 aa18.33■□□□□ 0.52
PCCB-201ENST00000251654 ATF7P17544 494 aaPredicted RBP18.33■□□□□ 0.52
PCCB-201ENST00000251654 VSNL1P62760 191 aa18.33■□□□□ 0.52
PCCB-201ENST00000251654 SOWAHAQ2M3V2 549 aa18.33■□□□□ 0.52
PCCB-201ENST00000251654 WDR93Q6P2C0 686 aa18.33■□□□□ 0.52
PCCB-201ENST00000251654 SLC43A3Q8NBI5 491 aa18.33■□□□□ 0.52
PCCB-201ENST00000251654 RNPC3Q96LT9 517 aaKnown RBP18.33■□□□□ 0.52
PCCB-201ENST00000251654 WNT8AQ9H1J5 351 aa18.33■□□□□ 0.52
PCCB-201ENST00000251654 GDAP2Q9NXN4 497 aa18.33■□□□□ 0.52
PCCB-201ENST00000251654 SPOPO43791 374 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms