RNA–Protein interactions for RNA: ENST00000250066.6

USP6-201, Transcript of ubiquitin specific peptidase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP6, Length 7,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-201ENST00000250066 CACHD1Q5VU97 1274 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 ERP27Q96DN0 273 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 CCT8L2Q96SF2 557 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 ZSWIM6Q9HCJ5 1215 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 LRRC14BA6NHZ5 514 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 P4HA2O15460 535 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 STX11O75558 287 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 MZF1P28698 734 aaPredicted RBP9.02□□□□□ -0.97
USP6-201ENST00000250066 BTDP43251 543 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 KRT24Q2M2I5 525 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 LCORLQ8N3X6 602 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 ATG16L2Q8NAA4 619 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 APOL5Q9BWW9 433 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 BCS1LQ9Y276 419 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 CFAP43Q8NDM7 1665 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 PCP4L1A6NKN8 68 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 ALOX12P18054 663 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 FNTAP49354 379 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 CASP4P49662 377 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 KPNA1P52294 538 aaPredicted RBP9.02□□□□□ -0.97
USP6-201ENST00000250066 COPAP53621 1224 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 STX5Q13190 355 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 ARHGAP27Q6ZUM4 889 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 NANOGNBQ7Z5D8 188 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 IQCF2Q8IXL9 164 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 SIX5Q8N196 739 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 ZCCHC7Q8N3Z6 543 aaKnown RBP9.02□□□□□ -0.97
USP6-201ENST00000250066 RFT1Q96AA3 541 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 DIDO1Q9BTC0 2240 aaKnown RBP9.02□□□□□ -0.97
USP6-201ENST00000250066 IQCMA0A1B0GVH7 501 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 MFAP3LO75121 409 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 SNX4O95219 450 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 PDIA3P30101 505 aaKnown RBP9.02□□□□□ -0.97
USP6-201ENST00000250066 STAT5AP42229 794 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 STAT5BP51692 787 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 BYSLQ13895 437 aaKnown RBP9.02□□□□□ -0.97
USP6-201ENST00000250066 C11orf57Q6ZUT1 292 aaPredicted RBP9.02□□□□□ -0.97
USP6-201ENST00000250066 C11orf70Q9BRQ4 267 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 MXD3Q9BW11 206 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 PCMTD2Q9NV79 361 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 ABCC4O15439 1325 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 PAICSP22234 425 aaKnown RBP9.02□□□□□ -0.97
USP6-201ENST00000250066 CAMKK2Q96RR4 588 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 MUC3BQ9H195 1237 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 EPC1Q9H2F5 836 aa9.02□□□□□ -0.97
USP6-201ENST00000250066 YTHDC2Q9H6S0 1430 aaKnown RBP9.01□□□□□ -0.97
USP6-201ENST00000250066 KANSL1LA0AUZ9 987 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 CHP2O43745 196 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 CDK20Q8IZL9 346 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 NSL1Q96IY1 281 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 ARMC7Q9H6L4 198 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 ARID1BQ8NFD5 2236 aaPredicted RBP9.01□□□□□ -0.97
USP6-201ENST00000250066 SFI1A8K8P3 1242 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 RTN3O95197 1032 aaPredicted RBP9.01□□□□□ -0.97
USP6-201ENST00000250066 MYL3P08590 195 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 BMP3P12645 472 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 GRIK1P39086 918 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 SERPINB9P50453 376 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 CYFIP1Q7L576 1253 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 XXYLT1Q8NBI6 393 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 MCPH1Q8NEM0 835 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 C1orf54Q8WWF1 131 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 DDX47Q9H0S4 455 aaKnown RBP9.01□□□□□ -0.97
USP6-201ENST00000250066 RAB6BQ9NRW1 208 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 PSMC3IPQ9P2W1 217 aaPredicted RBP9.01□□□□□ -0.97
USP6-201ENST00000250066 AREL1O15033 823 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 H2AFYO75367 372 aaKnown RBP9.01□□□□□ -0.97
USP6-201ENST00000250066 TRIM3O75382 744 aaPredicted RBP9.01□□□□□ -0.97
USP6-201ENST00000250066 PTPN7P35236 360 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 CRYMQ14894 314 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 CCSAPQ6IQ19 270 aaPredicted RBP9.01□□□□□ -0.97
USP6-201ENST00000250066 UGT3A1Q6NUS8 523 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 SYDE1Q6ZW31 735 aaPredicted RBP9.01□□□□□ -0.97
USP6-201ENST00000250066 ATPAF2Q8N5M1 289 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 NMD3Q96D46 503 aaKnown RBP9.01□□□□□ -0.97
USP6-201ENST00000250066 FAM192AQ9GZU8 254 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 TMEM138Q9NPI0 162 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 SH3BP4Q9P0V3 963 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 ASXL2Q76L83 1435 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 ICE1Q9Y2F5 2266 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 ADAMTS12P58397 1594 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 URB2Q14146 1524 aaKnown RBP9.01□□□□□ -0.97
USP6-201ENST00000250066 ESYT3A0FGR9 886 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 MDH1P40925 334 aaKnown RBP9.01□□□□□ -0.97
USP6-201ENST00000250066 KYNUQ16719 465 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 DOK7Q18PE1 504 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 TMC4Q7Z404 712 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 TRPC4APQ8TEL6 797 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 CATSPER2Q96P56 530 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 OSBPL8Q9BZF1 889 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 GPR63Q9BZJ6 419 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 PNMA3Q9UL41 463 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 PFASO15067 1338 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 ENO2P09104 434 aaPredicted RBP9.01□□□□□ -0.97
USP6-201ENST00000250066 LCP1P13796 627 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 CPB1P15086 417 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 GCLMP48507 274 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 SRP54P61011 504 aaKnown RBP9.01□□□□□ -0.97
USP6-201ENST00000250066 EPS8Q12929 822 aa9.01□□□□□ -0.97
USP6-201ENST00000250066 SUZ12Q15022 739 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms