RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 HHATQ5VTY9 493 aa11.54□□□□□ -0.56
SNIP1-204ENST00000638725 OTOAQ7RTW8 1153 aa11.54□□□□□ -0.56
SNIP1-204ENST00000638725 FAM160B2Q86V87 743 aa11.54□□□□□ -0.56
SNIP1-204ENST00000638725 ZNF677Q86XU0 584 aa11.54□□□□□ -0.56
SNIP1-204ENST00000638725 HAUS1Q96CS2 278 aa11.54□□□□□ -0.56
SNIP1-204ENST00000638725 MAK16Q9BXY0 300 aaKnown RBP11.54□□□□□ -0.56
SNIP1-204ENST00000638725 FOXP3Q9BZS1 431 aa11.54□□□□□ -0.56
SNIP1-204ENST00000638725 CORO1CQ9ULV4 474 aaPredicted RBP11.54□□□□□ -0.56
SNIP1-204ENST00000638725 NUMBLQ9Y6R0 609 aa11.54□□□□□ -0.56
SNIP1-204ENST00000638725 LIN7AO14910 233 aaPredicted RBP11.54□□□□□ -0.56
SNIP1-204ENST00000638725 TYROBPO43914 113 aa11.54□□□□□ -0.56
SNIP1-204ENST00000638725 PIAS1O75925 651 aa11.54□□□□□ -0.56
SNIP1-204ENST00000638725 LVRNQ6Q4G3 990 aa11.54□□□□□ -0.56
SNIP1-204ENST00000638725 MFSD7Q6UXD7 560 aa11.54□□□□□ -0.56
SNIP1-204ENST00000638725 NIPA1Q7RTP0 329 aa11.54□□□□□ -0.56
SNIP1-204ENST00000638725 USP37Q86T82 979 aa11.54□□□□□ -0.56
SNIP1-204ENST00000638725 CCDC125Q86Z20 511 aa11.54□□□□□ -0.56
SNIP1-204ENST00000638725 SUPT20HQ8NEM7 779 aa11.54□□□□□ -0.56
SNIP1-204ENST00000638725 TTC25Q96NG3 672 aa11.54□□□□□ -0.56
SNIP1-204ENST00000638725 NPHS2Q9NP85 383 aa11.54□□□□□ -0.56
SNIP1-204ENST00000638725 HOMER2Q9NSB8 354 aa11.54□□□□□ -0.56
SNIP1-204ENST00000638725 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.54□□□□□ -0.56
SNIP1-204ENST00000638725 COL11A2P13942 1736 aaPredicted RBP11.54□□□□□ -0.56
SNIP1-204ENST00000638725 GOLGB1Q14789 3259 aaKnown RBP11.54□□□□□ -0.56
SNIP1-204ENST00000638725 EP400Q96L91 3159 aa11.54□□□□□ -0.56
SNIP1-204ENST00000638725 ENTPD5O75356 428 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 HLA-DRAP01903 254 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 LINGO3P0C6S8 592 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 NOP14P78316 857 aaKnown RBP11.53□□□□□ -0.56
SNIP1-204ENST00000638725 AOC3Q16853 763 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 ANO5Q75V66 913 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 NLRP9Q7RTR0 991 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 ANKMY2Q8IV38 441 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 CDAN1Q8IWY9 1227 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 CPXCR1Q8N123 301 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 CLEC4DQ8WXI8 215 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 ZNF75CPQ92670 426 aaPredicted RBP11.53□□□□□ -0.56
SNIP1-204ENST00000638725 ACSF2Q96CM8 615 aaPredicted RBP11.53□□□□□ -0.56
SNIP1-204ENST00000638725 MASTLQ96GX5 879 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 DENND2DQ9H6A0 471 aaPredicted RBP11.53□□□□□ -0.56
SNIP1-204ENST00000638725 TCEAL9Q9UHQ7 104 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 ZFP69BQ9UJL9 534 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 LRRC42Q9Y546 428 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 WDR91A4D1P6 747 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 GOLGA8SH3BPF8 625 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 GOLGA8MH3BSY2 632 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 ZC3H11AO75152 810 aaKnown RBP eCLIP11.53□□□□□ -0.56
SNIP1-204ENST00000638725 MYCNP04198 464 aaPredicted RBP11.53□□□□□ -0.56
SNIP1-204ENST00000638725 KRT1P04264 644 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 ICAM1P05362 532 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 MYCLP12524 364 aaPredicted RBP11.53□□□□□ -0.56
SNIP1-204ENST00000638725 CAP2P40123 477 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 SLC18A1P54219 525 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 RPL7AP62424 266 aaKnown RBP11.53□□□□□ -0.56
SNIP1-204ENST00000638725 LMNB2Q03252 620 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 PDIA2Q13087 525 aaKnown RBP11.53□□□□□ -0.56
SNIP1-204ENST00000638725 EFTUD2Q15029 972 aaKnown RBP eCLIP11.53□□□□□ -0.56
SNIP1-204ENST00000638725 EAPPQ56P03 285 aaPredicted RBP11.53□□□□□ -0.56
SNIP1-204ENST00000638725 PLEKHG4Q58EX7 1191 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 BRDTQ58F21 947 aaPredicted RBP11.53□□□□□ -0.56
SNIP1-204ENST00000638725 WDR44Q5JSH3 913 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 PLEKHA7Q6IQ23 1121 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 ANO7Q6IWH7 933 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 TMEM270Q6UE05 265 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 C15orf39Q6ZRI6 1047 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 CEP128Q6ZU80 1094 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 LARGE2Q8N3Y3 721 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 ALLCQ8N6M5 410 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 BICD1Q96G01 975 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 SLITRK1Q96PX8 696 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 TAAR1Q96RJ0 339 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 YIPF3Q9GZM5 350 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 DEFB129Q9H1M3 183 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 C12orf65Q9H3J6 166 aaKnown RBP11.53□□□□□ -0.56
SNIP1-204ENST00000638725 MRPL47Q9HD33 250 aaKnown RBP11.53□□□□□ -0.56
SNIP1-204ENST00000638725 CYLDQ9NQC7 956 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 TBC1D22BQ9NU19 505 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 SENP1Q9P0U3 644 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 ZFATQ9P243 1243 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 FEM1BQ9UK73 627 aa11.53□□□□□ -0.56
SNIP1-204ENST00000638725 ZNF646O15015 1829 aaPredicted RBP11.53□□□□□ -0.56
SNIP1-204ENST00000638725 A6NHS1 94 aa11.52□□□□□ -0.56
SNIP1-204ENST00000638725 PPP1R12AO14974 1030 aaPredicted RBP11.52□□□□□ -0.56
SNIP1-204ENST00000638725 KRT4P19013 534 aa11.52□□□□□ -0.56
SNIP1-204ENST00000638725 ADRA1DP25100 572 aa11.52□□□□□ -0.56
SNIP1-204ENST00000638725 PIK3CAP42336 1068 aa11.52□□□□□ -0.56
SNIP1-204ENST00000638725 BPIFB4P59827 614 aa11.52□□□□□ -0.56
SNIP1-204ENST00000638725 MAPK6Q16659 721 aa11.52□□□□□ -0.56
SNIP1-204ENST00000638725 TDRD10Q5VZ19 366 aaKnown RBP11.52□□□□□ -0.56
SNIP1-204ENST00000638725 MTDHQ86UE4 582 aaKnown RBP11.52□□□□□ -0.56
SNIP1-204ENST00000638725 NLRX1Q86UT6 975 aa11.52□□□□□ -0.56
SNIP1-204ENST00000638725 ABRAQ8N0Z2 381 aa11.52□□□□□ -0.56
SNIP1-204ENST00000638725 PSMC3IPQ9P2W1 217 aaPredicted RBP11.52□□□□□ -0.56
SNIP1-204ENST00000638725 DCTN4Q9UJW0 460 aa11.52□□□□□ -0.56
SNIP1-204ENST00000638725 PCDHB4Q9Y5E5 795 aa11.52□□□□□ -0.56
SNIP1-204ENST00000638725 ALOX15BO15296 676 aa11.52□□□□□ -0.57
SNIP1-204ENST00000638725 PLA2G6O60733 806 aa11.52□□□□□ -0.57
SNIP1-204ENST00000638725 IFNB1P01574 187 aa11.52□□□□□ -0.57
SNIP1-204ENST00000638725 TNNI1P19237 187 aa11.52□□□□□ -0.57
SNIP1-204ENST00000638725 ACO1P21399 889 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms