RNA–Protein interactions for RNA: ENST00000633371.1

PHACTR4-209, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 3

Gene PHACTR4, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-209ENST00000633371 SENP8Q96LD8 212 aa15.22■□□□□ 0.03
PHACTR4-209ENST00000633371 ZNF560Q96MR9 790 aa15.22■□□□□ 0.03
PHACTR4-209ENST00000633371 UROC1Q96N76 676 aa15.22■□□□□ 0.03
PHACTR4-209ENST00000633371 SPAG5Q96R06 1193 aa15.22■□□□□ 0.03
PHACTR4-209ENST00000633371 ZSWIM1Q9BR11 485 aa15.22■□□□□ 0.03
PHACTR4-209ENST00000633371 ELOVL4Q9GZR5 314 aa15.22■□□□□ 0.03
PHACTR4-209ENST00000633371 CYP3A43Q9HB55 503 aa15.22■□□□□ 0.03
PHACTR4-209ENST00000633371 CISHQ9NSE2 258 aa15.22■□□□□ 0.03
PHACTR4-209ENST00000633371 MARCH5Q9NX47 278 aa15.22■□□□□ 0.03
PHACTR4-209ENST00000633371 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.22■□□□□ 0.03
PHACTR4-209ENST00000633371 L1RE1Q9UN81 338 aa15.22■□□□□ 0.03
PHACTR4-209ENST00000633371 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.22■□□□□ 0.03
PHACTR4-209ENST00000633371 SNX9Q9Y5X1 595 aa15.22■□□□□ 0.03
PHACTR4-209ENST00000633371 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.22■□□□□ 0.03
PHACTR4-209ENST00000633371 CEP290O15078 2479 aa15.22■□□□□ 0.03
PHACTR4-209ENST00000633371 SOWAHDA6NJG2 315 aa15.21■□□□□ 0.03
PHACTR4-209ENST00000633371 TMEM189-UBE2V1I3L0A0 370 aa15.21■□□□□ 0.03
PHACTR4-209ENST00000633371 I3L4J1 428 aa15.21■□□□□ 0.03
PHACTR4-209ENST00000633371 NRP1O14786 923 aa15.21■□□□□ 0.03
PHACTR4-209ENST00000633371 HCRTO43612 131 aa15.21■□□□□ 0.03
PHACTR4-209ENST00000633371 EFEMP2O95967 443 aa15.21■□□□□ 0.03
PHACTR4-209ENST00000633371 GALTP07902 379 aa15.21■□□□□ 0.03
PHACTR4-209ENST00000633371 LINC00271P0C7V0 271 aa15.21■□□□□ 0.03
PHACTR4-209ENST00000633371 CHRNB2P17787 502 aa15.21■□□□□ 0.03
PHACTR4-209ENST00000633371 CD58P19256 250 aa15.21■□□□□ 0.03
PHACTR4-209ENST00000633371 PNPLA4P41247 253 aa15.21■□□□□ 0.03
PHACTR4-209ENST00000633371 ARID5AQ03989 594 aa15.21■□□□□ 0.03
PHACTR4-209ENST00000633371 INCA1Q0VD86 236 aa15.21■□□□□ 0.03
PHACTR4-209ENST00000633371 ASIC2Q16515 512 aa15.21■□□□□ 0.03
PHACTR4-209ENST00000633371 SV2CQ496J9 727 aa15.21■□□□□ 0.03
PHACTR4-209ENST00000633371 C9orf50Q5SZB4 431 aa15.21■□□□□ 0.03
PHACTR4-209ENST00000633371 DCLRE1AQ6PJP8 1040 aa15.21■□□□□ 0.03
PHACTR4-209ENST00000633371 ZNF571Q7Z3V5 609 aaPredicted RBP15.21■□□□□ 0.03
PHACTR4-209ENST00000633371 TMEM173Q86WV6 379 aaPredicted RBP15.21■□□□□ 0.03
PHACTR4-209ENST00000633371 ABI1Q8IZP0 508 aa15.21■□□□□ 0.03
PHACTR4-209ENST00000633371 DDX1Q92499 740 aaKnown RBP15.21■□□□□ 0.03
PHACTR4-209ENST00000633371 FAM81BQ96LP2 452 aa15.21■□□□□ 0.03
PHACTR4-209ENST00000633371 BAG1Q99933 345 aaPredicted RBP15.21■□□□□ 0.03
PHACTR4-209ENST00000633371 NUCKS1Q9H1E3 243 aaKnown RBP15.21■□□□□ 0.03
PHACTR4-209ENST00000633371 RNF216Q9NWF9 866 aaPredicted RBP15.21■□□□□ 0.03
PHACTR4-209ENST00000633371 NOCTQ9UK39 431 aaKnown RBP15.21■□□□□ 0.03
PHACTR4-209ENST00000633371 PYCARDQ9ULZ3 195 aa15.21■□□□□ 0.03
PHACTR4-209ENST00000633371 PCDHB4Q9Y5E5 795 aa15.21■□□□□ 0.03
PHACTR4-209ENST00000633371 PTPRDP23468 1912 aa15.2■□□□□ 0.02
PHACTR4-209ENST00000633371 ZBBXA8MT70 800 aa15.2■□□□□ 0.02
PHACTR4-209ENST00000633371 M0QZQ0 153 aa15.2■□□□□ 0.02
PHACTR4-209ENST00000633371 CYB561D2O14569 222 aa15.2■□□□□ 0.02
PHACTR4-209ENST00000633371 CILPO75339 1184 aa15.2■□□□□ 0.02
PHACTR4-209ENST00000633371 B3GAT3O94766 335 aa15.2■□□□□ 0.02
PHACTR4-209ENST00000633371 SERPING1P05155 500 aa15.2■□□□□ 0.02
PHACTR4-209ENST00000633371 EIF4A3P38919 411 aaKnown RBP15.2■□□□□ 0.02
PHACTR4-209ENST00000633371 PBX3P40426 434 aa15.2■□□□□ 0.02
PHACTR4-209ENST00000633371 OR1G1P47890 313 aa15.2■□□□□ 0.02
PHACTR4-209ENST00000633371 KCNJ6P48051 423 aa15.2■□□□□ 0.02
PHACTR4-209ENST00000633371 RAD23BP54727 409 aa15.2■□□□□ 0.02
PHACTR4-209ENST00000633371 TNNC1P63316 161 aa15.2■□□□□ 0.02
PHACTR4-209ENST00000633371 RNASELQ05823 741 aaKnown RBP15.2■□□□□ 0.02
PHACTR4-209ENST00000633371 MAPK8IP2Q13387 824 aaPredicted RBP15.2■□□□□ 0.02
PHACTR4-209ENST00000633371 WSCD1Q658N2 575 aa15.2■□□□□ 0.02
PHACTR4-209ENST00000633371 NOP9Q86U38 636 aaKnown RBP15.2■□□□□ 0.02
PHACTR4-209ENST00000633371 SLC47A2Q86VL8 602 aa15.2■□□□□ 0.02
PHACTR4-209ENST00000633371 PDCL2Q8N4E4 241 aa15.2■□□□□ 0.02
PHACTR4-209ENST00000633371 RBBP8NLQ8NC74 664 aaPredicted RBP15.2■□□□□ 0.02
PHACTR4-209ENST00000633371 HASPINQ8TF76 798 aa15.2■□□□□ 0.02
PHACTR4-209ENST00000633371 SLC20A1Q8WUM9 679 aa15.2■□□□□ 0.02
PHACTR4-209ENST00000633371 MRPL9Q9BYD2 267 aaKnown RBP15.2■□□□□ 0.02
PHACTR4-209ENST00000633371 HAUS4Q9H6D7 363 aa15.2■□□□□ 0.02
PHACTR4-209ENST00000633371 PRG3Q9Y2Y8 225 aaPredicted RBP15.2■□□□□ 0.02
PHACTR4-209ENST00000633371 MRPL42Q9Y6G3 142 aaKnown RBP15.2■□□□□ 0.02
PHACTR4-209ENST00000633371 PLXNA4Q9HCM2 1894 aa15.2■□□□□ 0.02
PHACTR4-209ENST00000633371 MYH10P35580 1976 aa15.2■□□□□ 0.02
PHACTR4-209ENST00000633371 NT5C1B-RDH14C9J2C7 533 aa15.19■□□□□ 0.02
PHACTR4-209ENST00000633371 ZNF263O14978 683 aa15.19■□□□□ 0.02
PHACTR4-209ENST00000633371 TACC1O75410 805 aa15.19■□□□□ 0.02
PHACTR4-209ENST00000633371 GJB5O95377 273 aa15.19■□□□□ 0.02
PHACTR4-209ENST00000633371 KRT5P13647 590 aa15.19■□□□□ 0.02
PHACTR4-209ENST00000633371 FERP16591 822 aa15.19■□□□□ 0.02
PHACTR4-209ENST00000633371 USP8P40818 1118 aa15.19■□□□□ 0.02
PHACTR4-209ENST00000633371 BCAR1P56945 870 aa15.19■□□□□ 0.02
PHACTR4-209ENST00000633371 PTK2Q05397 1052 aa15.19■□□□□ 0.02
PHACTR4-209ENST00000633371 ORC1Q13415 861 aa15.19■□□□□ 0.02
PHACTR4-209ENST00000633371 TMEM270Q6UE05 265 aa15.19■□□□□ 0.02
PHACTR4-209ENST00000633371 CMTR2Q8IYT2 770 aaKnown RBP15.19■□□□□ 0.02
PHACTR4-209ENST00000633371 LRRC43Q8N309 656 aa15.19■□□□□ 0.02
PHACTR4-209ENST00000633371 TOP6BLQ8N6T0 577 aa15.19■□□□□ 0.02
PHACTR4-209ENST00000633371 SLC4A11Q8NBS3 891 aa15.19■□□□□ 0.02
PHACTR4-209ENST00000633371 RSPH1Q8WYR4 309 aa15.19■□□□□ 0.02
PHACTR4-209ENST00000633371 TFAP2BQ92481 460 aa15.19■□□□□ 0.02
PHACTR4-209ENST00000633371 SUSD3Q96L08 255 aa15.19■□□□□ 0.02
PHACTR4-209ENST00000633371 FAM193BQ96PV7 902 aaPredicted RBP15.19■□□□□ 0.02
PHACTR4-209ENST00000633371 MMS19Q96T76 1030 aa15.19■□□□□ 0.02
PHACTR4-209ENST00000633371 LBHD1Q9BQE6 289 aaPredicted RBP15.19■□□□□ 0.02
PHACTR4-209ENST00000633371 LPIN3Q9BQK8 851 aa15.19■□□□□ 0.02
PHACTR4-209ENST00000633371 RTP3Q9BQQ7 232 aa15.19■□□□□ 0.02
PHACTR4-209ENST00000633371 TMEM175Q9BSA9 504 aa15.19■□□□□ 0.02
PHACTR4-209ENST00000633371 VN1R3Q9BXE9 311 aa15.19■□□□□ 0.02
PHACTR4-209ENST00000633371 NENFQ9UMX5 172 aa15.19■□□□□ 0.02
PHACTR4-209ENST00000633371 R3HCC1Q9Y3T6 440 aaKnown RBP15.19■□□□□ 0.02
PHACTR4-209ENST00000633371 DDX3XO00571 662 aaKnown RBP eCLIP15.18■□□□□ 0.024e-12■□□□□ 10
PHACTR4-209ENST00000633371 GABRDO14764 452 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms