RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 SCARA3Q6AZY7 606 aa20.56■□□□□ 0.88
CNOT9-209ENST00000627282 WDR49Q8IV35 697 aa20.56■□□□□ 0.88
CNOT9-209ENST00000627282 BEST2Q8NFU1 509 aa20.56■□□□□ 0.88
CNOT9-209ENST00000627282 BCL7CQ8WUZ0 217 aaPredicted RBP20.56■□□□□ 0.88
CNOT9-209ENST00000627282 ZNF516Q92618 1163 aa20.56■□□□□ 0.88
CNOT9-209ENST00000627282 MTMR12Q9C0I1 747 aa20.56■□□□□ 0.88
CNOT9-209ENST00000627282 LMAN2LQ9H0V9 348 aa20.56■□□□□ 0.88
CNOT9-209ENST00000627282 VCANP13611 3396 aa20.55■□□□□ 0.88
CNOT9-209ENST00000627282 SPTBN5Q9NRC6 3674 aaKnown RBP20.55■□□□□ 0.88
CNOT9-209ENST00000627282 XIRP2A4UGR9 3374 aa20.55■□□□□ 0.88
CNOT9-209ENST00000627282 ALDH2P05091 517 aa20.55■□□□□ 0.88
CNOT9-209ENST00000627282 TRIM49P0CI25 452 aa20.55■□□□□ 0.88
CNOT9-209ENST00000627282 TRIM49CP0CI26 452 aa20.55■□□□□ 0.88
CNOT9-209ENST00000627282 TNNI1P19237 187 aa20.55■□□□□ 0.88
CNOT9-209ENST00000627282 LRPAP1P30533 357 aa20.55■□□□□ 0.88
CNOT9-209ENST00000627282 ALDH7A1P49419 539 aaKnown RBP20.55■□□□□ 0.88
CNOT9-209ENST00000627282 UPP1Q16831 310 aa20.55■□□□□ 0.88
CNOT9-209ENST00000627282 TIGD5Q53EQ6 642 aa20.55■□□□□ 0.88
CNOT9-209ENST00000627282 SLC39A11Q8N1S5 342 aa20.55■□□□□ 0.88
CNOT9-209ENST00000627282 C1orf127Q8N9H9 656 aa20.55■□□□□ 0.88
CNOT9-209ENST00000627282 CXorf38Q8TB03 319 aa20.55■□□□□ 0.88
CNOT9-209ENST00000627282 AAASQ9NRG9 546 aa20.55■□□□□ 0.88
CNOT9-209ENST00000627282 FAM207AQ9NSI2 230 aaPredicted RBP20.55■□□□□ 0.88
CNOT9-209ENST00000627282 MARCH5Q9NX47 278 aa20.55■□□□□ 0.88
CNOT9-209ENST00000627282 FAN1Q9Y2M0 1017 aa20.55■□□□□ 0.88
CNOT9-209ENST00000627282 EPN1Q9Y6I3 576 aaPredicted RBP20.55■□□□□ 0.88
CNOT9-209ENST00000627282 MYO7AQ13402 2215 aa20.55■□□□□ 0.88
CNOT9-209ENST00000627282 PPEF2O14830 753 aa20.54■□□□□ 0.88
CNOT9-209ENST00000627282 EPHB6O15197 1021 aa20.54■□□□□ 0.88
CNOT9-209ENST00000627282 XPOTO43592 962 aaKnown RBP20.54■□□□□ 0.88
CNOT9-209ENST00000627282 KRT13P13646 458 aa20.54■□□□□ 0.88
CNOT9-209ENST00000627282 ENPEPQ07075 957 aa20.54■□□□□ 0.88
CNOT9-209ENST00000627282 DUOXA2Q1HG44 320 aa20.54■□□□□ 0.88
CNOT9-209ENST00000627282 KLHL23Q8NBE8 558 aa20.54■□□□□ 0.88
CNOT9-209ENST00000627282 C3orf58Q8NDZ4 430 aa20.54■□□□□ 0.88
CNOT9-209ENST00000627282 ATXN2LQ8WWM7 1075 aaKnown RBP20.54■□□□□ 0.88
CNOT9-209ENST00000627282 ALG13Q9NP73 1137 aaKnown RBP20.54■□□□□ 0.88
CNOT9-209ENST00000627282 DPP3Q9NY33 737 aa20.54■□□□□ 0.88
CNOT9-209ENST00000627282 PCDHB12Q9Y5F1 795 aa20.54■□□□□ 0.88
CNOT9-209ENST00000627282 TTC28Q96AY4 2481 aa20.54■□□□□ 0.88
CNOT9-209ENST00000627282 BRWD1Q9NSI6 2320 aa20.54■□□□□ 0.88
CNOT9-209ENST00000627282 PODXLO00592 558 aa20.53■□□□□ 0.88
CNOT9-209ENST00000627282 DYNC1I1O14576 645 aa20.53■□□□□ 0.88
CNOT9-209ENST00000627282 KIF4AO95239 1232 aa20.53■□□□□ 0.88
CNOT9-209ENST00000627282 NDUFA10O95299 355 aa20.53■□□□□ 0.88
CNOT9-209ENST00000627282 ITGB1P05556 798 aa20.53■□□□□ 0.88
CNOT9-209ENST00000627282 TMEM191BP0C7N4 346 aa20.53■□□□□ 0.88
CNOT9-209ENST00000627282 CD300LGQ6UXG3 332 aa20.53■□□□□ 0.88
CNOT9-209ENST00000627282 CCDC170Q8IYT3 715 aa20.53■□□□□ 0.88
CNOT9-209ENST00000627282 ACRBPQ8NEB7 543 aa20.53■□□□□ 0.88
CNOT9-209ENST00000627282 BAP1Q92560 729 aa20.53■□□□□ 0.88
CNOT9-209ENST00000627282 UROC1Q96N76 676 aa20.53■□□□□ 0.88
CNOT9-209ENST00000627282 DNAI1Q9UI46 699 aa20.53■□□□□ 0.88
CNOT9-209ENST00000627282 SIX4Q9UIU6 781 aa20.53■□□□□ 0.88
CNOT9-209ENST00000627282 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.53■□□□□ 0.88
CNOT9-209ENST00000627282 ANO9A1A5B4 782 aa20.53■□□□□ 0.88
CNOT9-209ENST00000627282 AFPP02771 609 aaKnown RBP20.53■□□□□ 0.88
CNOT9-209ENST00000627282 RPL9P32969 192 aaKnown RBP20.53■□□□□ 0.88
CNOT9-209ENST00000627282 PPP3CAQ08209 521 aa20.53■□□□□ 0.88
CNOT9-209ENST00000627282 C9orf57Q5W0N0 161 aa20.53■□□□□ 0.88
CNOT9-209ENST00000627282 DDX27Q96GQ7 796 aaKnown RBP20.53■□□□□ 0.88
CNOT9-209ENST00000627282 IGSF21Q96ID5 467 aa20.53■□□□□ 0.88
CNOT9-209ENST00000627282 ANKRD36BP1Q96IX9 119 aa20.53■□□□□ 0.88
CNOT9-209ENST00000627282 LSM14BQ9BX40 385 aaKnown RBP20.53■□□□□ 0.88
CNOT9-209ENST00000627282 SPG21Q9NZD8 308 aa20.53■□□□□ 0.88
CNOT9-209ENST00000627282 CEP72Q9P209 647 aa20.53■□□□□ 0.88
CNOT9-209ENST00000627282 SCN1AP35498 2009 aa20.52■□□□□ 0.88
CNOT9-209ENST00000627282 FGF18O76093 207 aa20.52■□□□□ 0.88
CNOT9-209ENST00000627282 B3GAT3O94766 335 aa20.52■□□□□ 0.88
CNOT9-209ENST00000627282 NOL4O94818 638 aa20.52■□□□□ 0.88
CNOT9-209ENST00000627282 CYLC1P35663 651 aaPredicted RBP20.52■□□□□ 0.88
CNOT9-209ENST00000627282 PPM1AP35813 382 aa20.52■□□□□ 0.88
CNOT9-209ENST00000627282 DCAF17Q5H9S7 520 aaPredicted RBP20.52■□□□□ 0.88
CNOT9-209ENST00000627282 PDXDC1Q6P996 788 aa20.52■□□□□ 0.88
CNOT9-209ENST00000627282 DCLRE1AQ6PJP8 1040 aa20.52■□□□□ 0.88
CNOT9-209ENST00000627282 TRAPPC11Q7Z392 1133 aa20.52■□□□□ 0.88
CNOT9-209ENST00000627282 SPPL3Q8TCT6 385 aa20.52■□□□□ 0.88
CNOT9-209ENST00000627282 HASPINQ8TF76 798 aa20.52■□□□□ 0.88
CNOT9-209ENST00000627282 SLC35C1Q96A29 364 aa20.52■□□□□ 0.88
CNOT9-209ENST00000627282 NSUN3Q9H649 340 aaKnown RBP20.52■□□□□ 0.88
CNOT9-209ENST00000627282 COG5Q9UP83 839 aa20.52■□□□□ 0.88
CNOT9-209ENST00000627282 TMEM189-UBE2V1I3L0A0 370 aa20.51■□□□□ 0.87
CNOT9-209ENST00000627282 PIRO00625 290 aa20.51■□□□□ 0.87
CNOT9-209ENST00000627282 TNNC2P02585 160 aa20.51■□□□□ 0.87
CNOT9-209ENST00000627282 C4BPAP04003 597 aaKnown RBP20.51■□□□□ 0.87
CNOT9-209ENST00000627282 ITGB3P05106 788 aa20.51■□□□□ 0.87
CNOT9-209ENST00000627282 GNG11P61952 73 aa20.51■□□□□ 0.87
CNOT9-209ENST00000627282 MRPS5P82675 430 aaKnown RBP20.51■□□□□ 0.87
CNOT9-209ENST00000627282 CAMK1Q14012 370 aa20.51■□□□□ 0.87
CNOT9-209ENST00000627282 TDRD10Q5VZ19 366 aaKnown RBP20.51■□□□□ 0.87
CNOT9-209ENST00000627282 C15orf39Q6ZRI6 1047 aa20.51■□□□□ 0.87
CNOT9-209ENST00000627282 SV2AQ7L0J3 742 aa20.51■□□□□ 0.87
CNOT9-209ENST00000627282 USP37Q86T82 979 aa20.51■□□□□ 0.87
CNOT9-209ENST00000627282 HLA-CQ95604 372 aa20.51■□□□□ 0.87
CNOT9-209ENST00000627282 COLEC11Q9BWP8 271 aa20.51■□□□□ 0.87
CNOT9-209ENST00000627282 VN1R3Q9BXE9 311 aa20.51■□□□□ 0.87
CNOT9-209ENST00000627282 NUCKS1Q9H1E3 243 aaKnown RBP20.51■□□□□ 0.87
CNOT9-209ENST00000627282 NHEJ1Q9H9Q4 299 aaPredicted RBP20.51■□□□□ 0.87
CNOT9-209ENST00000627282 ITGA11Q9UKX5 1188 aa20.51■□□□□ 0.87
CNOT9-209ENST00000627282 CARNS1A5YM72 827 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms