RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 MAPKAPK5Q8IW41 473 aa4.34□□□□□ -1.71
VBP1-204ENST00000625964 FITM2Q8N6M3 262 aa4.34□□□□□ -1.71
VBP1-204ENST00000625964 NLGN4YQ8NFZ3 816 aaPredicted RBP4.34□□□□□ -1.71
VBP1-204ENST00000625964 TBC1D15Q8TC07 691 aa4.34□□□□□ -1.71
VBP1-204ENST00000625964 NSUN6Q8TEA1 469 aaKnown RBP4.34□□□□□ -1.71
VBP1-204ENST00000625964 MRGPRX4Q96LA9 322 aa4.34□□□□□ -1.71
VBP1-204ENST00000625964 PACSIN1Q9BY11 444 aa4.34□□□□□ -1.71
VBP1-204ENST00000625964 RNPEPQ9H4A4 650 aa4.34□□□□□ -1.71
VBP1-204ENST00000625964 FAM30AQ9NZY2 134 aa4.34□□□□□ -1.71
VBP1-204ENST00000625964 A0A1B0GTW7 788 aa4.33□□□□□ -1.72
VBP1-204ENST00000625964 LRRC14BA6NHZ5 514 aa4.33□□□□□ -1.72
VBP1-204ENST00000625964 BMP15O95972 392 aa4.33□□□□□ -1.72
VBP1-204ENST00000625964 CELA2AP08217 269 aa4.33□□□□□ -1.72
VBP1-204ENST00000625964 SBK3P0C264 359 aa4.33□□□□□ -1.72
VBP1-204ENST00000625964 PDCP20941 246 aa4.33□□□□□ -1.72
VBP1-204ENST00000625964 GCSHP23434 173 aa4.33□□□□□ -1.72
VBP1-204ENST00000625964 MCL1Q07820 350 aa4.33□□□□□ -1.72
VBP1-204ENST00000625964 PIN1Q13526 163 aaPredicted RBP4.33□□□□□ -1.72
VBP1-204ENST00000625964 EZH2Q15910 746 aaKnown RBP4.33□□□□□ -1.72
VBP1-204ENST00000625964 PABPC1LQ4VXU2 614 aaKnown RBP4.33□□□□□ -1.72
VBP1-204ENST00000625964 ODR4Q5SWX8 454 aa4.33□□□□□ -1.72
VBP1-204ENST00000625964 PDPRQ8NCN5 879 aa4.33□□□□□ -1.72
VBP1-204ENST00000625964 ZBTB9Q96C00 473 aa4.33□□□□□ -1.72
VBP1-204ENST00000625964 UROC1Q96N76 676 aa4.33□□□□□ -1.72
VBP1-204ENST00000625964 VRK1Q99986 396 aaPredicted RBP4.33□□□□□ -1.72
VBP1-204ENST00000625964 MAN1C1Q9NR34 630 aa4.33□□□□□ -1.72
VBP1-204ENST00000625964 TBCCD1Q9NVR7 557 aa4.33□□□□□ -1.72
VBP1-204ENST00000625964 CALCOCO1Q9P1Z2 691 aa4.33□□□□□ -1.72
VBP1-204ENST00000625964 USP25Q9UHP3 1055 aa4.33□□□□□ -1.72
VBP1-204ENST00000625964 ANKRD6Q9Y2G4 727 aa4.33□□□□□ -1.72
VBP1-204ENST00000625964 NOX1Q9Y5S8 564 aa4.33□□□□□ -1.72
VBP1-204ENST00000625964 AATKQ6ZMQ8 1374 aa4.33□□□□□ -1.72
VBP1-204ENST00000625964 CKBP12277 381 aa4.32□□□□□ -1.72
VBP1-204ENST00000625964 FGFR4P22455 802 aa4.32□□□□□ -1.72
VBP1-204ENST00000625964 SMARCA1P28370 1054 aa4.32□□□□□ -1.72
VBP1-204ENST00000625964 SLC6A4P31645 630 aa4.32□□□□□ -1.72
VBP1-204ENST00000625964 NOMO3P69849 1222 aa4.32□□□□□ -1.72
VBP1-204ENST00000625964 HSD11B2P80365 405 aa4.32□□□□□ -1.72
VBP1-204ENST00000625964 DSC2Q02487 901 aa4.32□□□□□ -1.72
VBP1-204ENST00000625964 SRSF7Q16629 238 aaKnown RBP eCLIP4.32□□□□□ -1.72
VBP1-204ENST00000625964 KHDC1Q4VXA5 237 aaKnown RBP4.32□□□□□ -1.72
VBP1-204ENST00000625964 NOMO2Q5JPE7 1267 aa4.32□□□□□ -1.72
VBP1-204ENST00000625964 FOXR2Q6PJQ5 311 aa4.32□□□□□ -1.72
VBP1-204ENST00000625964 USP45Q70EL2 814 aa4.32□□□□□ -1.72
VBP1-204ENST00000625964 ACTRT2Q8TDY3 377 aa4.32□□□□□ -1.72
VBP1-204ENST00000625964 RGMAQ96B86 450 aa4.32□□□□□ -1.72
VBP1-204ENST00000625964 RNF31Q96EP0 1072 aa4.32□□□□□ -1.72
VBP1-204ENST00000625964 DMRTA2Q96SC8 542 aa4.32□□□□□ -1.72
VBP1-204ENST00000625964 TCF7L1Q9HCS4 588 aa4.32□□□□□ -1.72
VBP1-204ENST00000625964 TMEM74BQ9NUR3 256 aa4.32□□□□□ -1.72
VBP1-204ENST00000625964 ZNF180Q9UJW8 692 aa4.32□□□□□ -1.72
VBP1-204ENST00000625964 WIPF3A6NGB9 483 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 AKAP10O43572 662 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 ERN1O75460 977 aaKnown RBP4.31□□□□□ -1.72
VBP1-204ENST00000625964 ABLIM3O94929 683 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 AGFG2O95081 481 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 GPANK1O95872 356 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 FTLP02792 175 aaPredicted RBP4.31□□□□□ -1.72
VBP1-204ENST00000625964 IGKV2-30P06310 120 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 POU2F2P09086 479 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 VCAM1P19320 739 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 MALP21145 153 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 FXR1P51114 621 aaKnown RBP eCLIP4.31□□□□□ -1.72
VBP1-204ENST00000625964 RAB27AP51159 221 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 PROK1P58294 105 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 UTP14CQ5TAP6 766 aaKnown RBP4.31□□□□□ -1.72
VBP1-204ENST00000625964 THEMIS2Q5TEJ8 643 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 SLC4A10Q6U841 1118 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 TMEM132CQ8N3T6 1108 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 C3orf20Q8ND61 904 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 NUP133Q8WUM0 1156 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 MARS2Q96GW9 593 aaKnown RBP4.31□□□□□ -1.72
VBP1-204ENST00000625964 FCRL4Q96PJ5 515 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 NUP88Q99567 741 aaPredicted RBP4.31□□□□□ -1.72
VBP1-204ENST00000625964 GTPBP4Q9BZE4 634 aaKnown RBP4.31□□□□□ -1.72
VBP1-204ENST00000625964 DMTF1Q9Y222 760 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 MTO1Q9Y2Z2 717 aaKnown RBP4.31□□□□□ -1.72
VBP1-204ENST00000625964 CNTNAP2Q9UHC6 1331 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 E2F8A0AVK6 867 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 CCDC78A2IDD5 438 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 S100BP04271 92 aaPredicted RBP4.31□□□□□ -1.72
VBP1-204ENST00000625964 ELANEP08246 267 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 FCER1AP12319 257 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 EPHB1P54762 984 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 CXADRP78310 365 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 SLFN5Q08AF3 891 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 NOGQ13253 232 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 SNAPC2Q13487 334 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 PGS1Q32NB8 556 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 PLEKHG6Q3KR16 790 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 FLYWCH1Q4VC44 716 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 AKNAD1Q5T1N1 836 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 IFIT1BQ5T764 474 aaKnown RBP4.31□□□□□ -1.72
VBP1-204ENST00000625964 B3GNTL1Q67FW5 361 aaPredicted RBP4.31□□□□□ -1.72
VBP1-204ENST00000625964 ZNF365Q70YC5 407 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 AOPEPQ8N6M6 819 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 IL17RDQ8NFM7 739 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 HASPINQ8TF76 798 aa4.31□□□□□ -1.72
VBP1-204ENST00000625964 JPH3Q8WXH2 748 aaPredicted RBP4.31□□□□□ -1.72
VBP1-204ENST00000625964 BOD1Q96IK1 185 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms