RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 IFRD1O00458 451 aaPredicted RBP3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 ZNF185O15231 689 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 ZFPL1O95159 310 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 IL18RAPO95256 599 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 GRPP07492 148 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 PARP1P09874 1014 aaKnown RBP3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 SETSIPP0DME0 302 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 HARSP12081 509 aaKnown RBP3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 CHRM3P20309 590 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 FDXRP22570 491 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 GCSHP23434 173 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 PPM1AP35813 382 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 KCNJ5P48544 419 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 JAG1P78504 1218 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 MC2RQ01718 297 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 NHLH2Q02577 135 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 STK3Q13188 491 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 SLC35G1Q2M3R5 365 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 FAM209BQ5JX69 171 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 METTL24Q5JXM2 366 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 UBXN11Q5T124 520 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 GORABQ5T7V8 394 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 AGAP9Q5VTM2 703 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 DCAF12L1Q5VU92 463 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 C1orf228Q6PIY5 440 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 MAMDC4Q6UXC1 1216 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 SPOCD1Q6ZMY3 1216 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 POLNQ7Z5Q5 900 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 USP37Q86T82 979 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 CIR1Q86X95 450 aaPredicted RBP3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 CERS3Q8IU89 383 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 SLC17A8Q8NDX2 589 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 NSUN7Q8NE18 718 aaKnown RBP3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 NLGN4YQ8NFZ3 816 aaPredicted RBP3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 Q8TCH9 128 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 POF1BQ8WVV4 589 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 SCAMP4Q969E2 229 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 MIEF2Q96C03 454 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 C18orf8Q96DM3 657 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 MARS2Q96GW9 593 aaKnown RBP3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 TEPSINQ96N21 525 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 MPHOSPH9Q99550 1183 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 ZSWIM1Q9BR11 485 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 IMPG2Q9BZV3 1241 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 CERS4Q9HA82 394 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 CD248Q9HCU0 757 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 STARD7Q9NQZ5 370 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 HDAC5Q9UQL6 1122 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 CHST2Q9Y4C5 530 aa3.39□□□□□ -1.87
SCARNA4-202ENST00000625402 APOL1O14791 398 aa3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 DCLK1O15075 740 aa3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 VPS4BO75351 444 aa3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 ANXA1P04083 346 aa3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 GNAI2P04899 355 aa3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 ELANEP08246 267 aa3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 RPL17P18621 184 aaKnown RBP3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 ACO1P21399 889 aaKnown RBP3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 COMTP21964 271 aa3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 RNASE9P60153 205 aaKnown RBP3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 OCA2Q04671 838 aa3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 OS9Q13438 667 aaPredicted RBP3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 HABP2Q14520 560 aaPredicted RBP3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 GRAMD1BQ3KR37 738 aa3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 DGKKQ5KSL6 1271 aa3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 IZUMO3Q5VZ72 239 aa3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 NAIF1Q69YI7 327 aaPredicted RBP3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 ZDHHC24Q6UX98 284 aa3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 LRRC55Q6ZSA7 311 aa3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 DPP9Q86TI2 863 aa3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 RHOT2Q8IXI1 618 aa3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 SMC5Q8IY18 1101 aa3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 CFAP52Q8N1V2 620 aa3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 SLC15A4Q8N697 577 aa3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 FITM2Q8N6M3 262 aa3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 DNAJC5GQ8N7S2 189 aa3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 FAM46DQ8NEK8 389 aa3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 SUCLG2Q96I99 432 aa3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 ZC3H10Q96K80 434 aaKnown RBP3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 MNTQ99583 582 aa3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 POLR3GLQ9BT43 218 aa3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 SPATA5L1Q9BVQ7 753 aa3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 BRIP1Q9BX63 1249 aa3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 WDR12Q9GZL7 423 aaKnown RBP3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 VPS11Q9H270 941 aa3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 SMOC2Q9H3U7 446 aa3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 POGKQ9P215 609 aa3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 CTTNBP2NLQ9P2B4 639 aa3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 HESX1Q9UBX0 185 aa3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 PLEKHM1Q9Y4G2 1056 aa3.38□□□□□ -1.87
SCARNA4-202ENST00000625402 MBD3L4A6NDZ8 208 aaPredicted RBP3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 MBD3L3A6NE82 208 aaPredicted RBP3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 MARCH11A6NNE9 402 aa3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 AHRRA9YTQ3 701 aa3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 F5H423 210 aaPredicted RBP3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 PYCARD-AS1I3L0S3 204 aa3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 FOXN3O00409 490 aaPredicted RBP3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 MFAP3LO75121 409 aa3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 TCEA3O75764 348 aa3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 EIF3JO75822 258 aaKnown RBP3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 FGF18O76093 207 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms