RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 USH1CQ9Y6N9 552 aa21.58■■□□□ 1.04
NEK3-208ENST00000618534 RPA3P35244 121 aaPredicted RBP21.57■■□□□ 1.04
NEK3-208ENST00000618534 ARSEP51690 589 aa21.57■■□□□ 1.04
NEK3-208ENST00000618534 LMNB2Q03252 620 aa21.57■■□□□ 1.04
NEK3-208ENST00000618534 SPDYE2Q495Y8 402 aa21.57■■□□□ 1.04
NEK3-208ENST00000618534 TDRPQ86YL5 185 aa21.57■■□□□ 1.04
NEK3-208ENST00000618534 MRRFQ96E11 262 aaKnown RBP21.57■■□□□ 1.04
NEK3-208ENST00000618534 FNBP1Q96RU3 617 aa21.57■■□□□ 1.04
NEK3-208ENST00000618534 MOV10L1Q9BXT6 1211 aaKnown RBP21.57■■□□□ 1.04
NEK3-208ENST00000618534 LRMDAQ9H2I8 198 aa21.57■■□□□ 1.04
NEK3-208ENST00000618534 VPS37BQ9H9H4 285 aa21.57■■□□□ 1.04
NEK3-208ENST00000618534 C17orf75Q9HAS0 396 aa21.57■■□□□ 1.04
NEK3-208ENST00000618534 EXTL3O43909 919 aa21.57■■□□□ 1.04
NEK3-208ENST00000618534 WFS1O76024 890 aa21.57■■□□□ 1.04
NEK3-208ENST00000618534 VNN1O95497 513 aa21.57■■□□□ 1.04
NEK3-208ENST00000618534 C4BPAP04003 597 aaKnown RBP21.57■■□□□ 1.04
NEK3-208ENST00000618534 CDC25CP30307 473 aa21.57■■□□□ 1.04
NEK3-208ENST00000618534 GPS1Q13098 491 aa21.57■■□□□ 1.04
NEK3-208ENST00000618534 PSMD6Q15008 389 aa21.57■■□□□ 1.04
NEK3-208ENST00000618534 ANKRD20A2Q5SQ80 823 aa21.57■■□□□ 1.04
NEK3-208ENST00000618534 ANKRD20A1Q5TYW2 823 aa21.57■■□□□ 1.04
NEK3-208ENST00000618534 ANKRD20A3Q5VUR7 823 aa21.57■■□□□ 1.04
NEK3-208ENST00000618534 TRIM72Q6ZMU5 477 aa21.57■■□□□ 1.04
NEK3-208ENST00000618534 PHF13Q86YI8 300 aaPredicted RBP21.57■■□□□ 1.04
NEK3-208ENST00000618534 TTC25Q96NG3 672 aa21.57■■□□□ 1.04
NEK3-208ENST00000618534 SLITRK1Q96PX8 696 aa21.57■■□□□ 1.04
NEK3-208ENST00000618534 ADAM33Q9BZ11 813 aa21.57■■□□□ 1.04
NEK3-208ENST00000618534 XPNPEP1Q9NQW7 623 aa21.57■■□□□ 1.04
NEK3-208ENST00000618534 HAO1Q9UJM8 370 aa21.57■■□□□ 1.04
NEK3-208ENST00000618534 SCINQ9Y6U3 715 aa21.57■■□□□ 1.04
NEK3-208ENST00000618534 NLRP11P59045 1033 aaKnown RBP21.56■■□□□ 1.04
NEK3-208ENST00000618534 RPL7AP62424 266 aaKnown RBP21.56■■□□□ 1.04
NEK3-208ENST00000618534 CLDN10P78369 228 aa21.56■■□□□ 1.04
NEK3-208ENST00000618534 ENPEPQ07075 957 aa21.56■■□□□ 1.04
NEK3-208ENST00000618534 CUL2Q13617 745 aa21.56■■□□□ 1.04
NEK3-208ENST00000618534 PDK4Q16654 411 aa21.56■■□□□ 1.04
NEK3-208ENST00000618534 EAPPQ56P03 285 aaPredicted RBP21.56■■□□□ 1.04
NEK3-208ENST00000618534 MFSD7Q6UXD7 560 aa21.56■■□□□ 1.04
NEK3-208ENST00000618534 LARGE2Q8N3Y3 721 aa21.56■■□□□ 1.04
NEK3-208ENST00000618534 FEZF2Q8TBJ5 459 aa21.56■■□□□ 1.04
NEK3-208ENST00000618534 KCNV2Q8TDN2 545 aa21.56■■□□□ 1.04
NEK3-208ENST00000618534 CNKSR1Q969H4 720 aa21.56■■□□□ 1.04
NEK3-208ENST00000618534 LRRC37BQ96QE4 947 aa21.56■■□□□ 1.04
NEK3-208ENST00000618534 SMC6Q96SB8 1091 aa21.56■■□□□ 1.04
NEK3-208ENST00000618534 BATF3Q9NR55 127 aa21.56■■□□□ 1.04
NEK3-208ENST00000618534 PXMP2Q9NR77 195 aa21.56■■□□□ 1.04
NEK3-208ENST00000618534 PCDHA10Q9Y5I2 948 aa21.56■■□□□ 1.04
NEK3-208ENST00000618534 WDR81Q562E7 1941 aa21.56■■□□□ 1.04
NEK3-208ENST00000618534 ARID2Q68CP9 1835 aa21.56■■□□□ 1.04
NEK3-208ENST00000618534 TBC1D12O60347 775 aa21.56■■□□□ 1.04
NEK3-208ENST00000618534 EDF1O60869 148 aaKnown RBP21.56■■□□□ 1.04
NEK3-208ENST00000618534 KRT1P04264 644 aa21.56■■□□□ 1.04
NEK3-208ENST00000618534 ACOT2P49753 483 aa21.56■■□□□ 1.04
NEK3-208ENST00000618534 SLC1A5Q15758 541 aa21.56■■□□□ 1.04
NEK3-208ENST00000618534 RSBN1LQ6PCB5 846 aaPredicted RBP21.56■■□□□ 1.04
NEK3-208ENST00000618534 RGS9BPQ6ZS82 235 aa21.56■■□□□ 1.04
NEK3-208ENST00000618534 ALLCQ8N6M5 410 aa21.56■■□□□ 1.04
NEK3-208ENST00000618534 SMG5Q9UPR3 1016 aaKnown RBP21.56■■□□□ 1.04
NEK3-208ENST00000618534 TELO2Q9Y4R8 837 aa21.56■■□□□ 1.04
NEK3-208ENST00000618534 NFASCO94856 1347 aa21.55■■□□□ 1.04
NEK3-208ENST00000618534 RAD17O75943 681 aa21.55■■□□□ 1.04
NEK3-208ENST00000618534 STBD1O95210 358 aa21.55■■□□□ 1.04
NEK3-208ENST00000618534 ASNSP08243 561 aa21.55■■□□□ 1.04
NEK3-208ENST00000618534 CA4P22748 312 aa21.55■■□□□ 1.04
NEK3-208ENST00000618534 LIG4P49917 911 aa21.55■■□□□ 1.04
NEK3-208ENST00000618534 PARP6Q2NL67 630 aa21.55■■□□□ 1.04
NEK3-208ENST00000618534 ZBED8Q8IZ13 594 aa21.55■■□□□ 1.04
NEK3-208ENST00000618534 RBBP8NLQ8NC74 664 aaPredicted RBP21.55■■□□□ 1.04
NEK3-208ENST00000618534 AKT1S1Q96B36 256 aa21.55■■□□□ 1.04
NEK3-208ENST00000618534 HAUS1Q96CS2 278 aa21.55■■□□□ 1.04
NEK3-208ENST00000618534 FAXDC2Q96IV6 333 aa21.55■■□□□ 1.04
NEK3-208ENST00000618534 VCPIP1Q96JH7 1222 aa21.55■■□□□ 1.04
NEK3-208ENST00000618534 SENP7Q9BQF6 1050 aa21.55■■□□□ 1.04
NEK3-208ENST00000618534 KIAA1683Q9H0B3 1180 aa21.55■■□□□ 1.04
NEK3-208ENST00000618534 SLC38A10Q9HBR0 1119 aa21.55■■□□□ 1.04
NEK3-208ENST00000618534 NKX1-2Q9UD57 310 aaPredicted RBP21.55■■□□□ 1.04
NEK3-208ENST00000618534 CETN2P41208 172 aa21.55■■□□□ 1.04
NEK3-208ENST00000618534 CCDC142Q17RM4 750 aa21.55■■□□□ 1.04
NEK3-208ENST00000618534 ARHGEF16Q5VV41 709 aa21.55■■□□□ 1.04
NEK3-208ENST00000618534 LRRC8CQ8TDW0 803 aa21.55■■□□□ 1.04
NEK3-208ENST00000618534 RBM41Q96IZ5 413 aaKnown RBP21.55■■□□□ 1.04
NEK3-208ENST00000618534 PARVAQ9NVD7 372 aa21.55■■□□□ 1.04
NEK3-208ENST00000618534 ARHGAP28Q9P2N2 729 aa21.55■■□□□ 1.04
NEK3-208ENST00000618534 A0A1W2PPM1 405 aa21.54■■□□□ 1.04
NEK3-208ENST00000618534 ATP5HO75947 161 aa21.54■■□□□ 1.04
NEK3-208ENST00000618534 C1QBPQ07021 282 aaKnown RBP21.54■■□□□ 1.04
NEK3-208ENST00000618534 NLRX1Q86UT6 975 aa21.54■■□□□ 1.04
NEK3-208ENST00000618534 RCOR2Q8IZ40 523 aa21.54■■□□□ 1.04
NEK3-208ENST00000618534 ACSF2Q96CM8 615 aaPredicted RBP21.54■■□□□ 1.04
NEK3-208ENST00000618534 POLR3FQ9H1D9 316 aaPredicted RBP21.54■■□□□ 1.04
NEK3-208ENST00000618534 IP6K2Q9UHH9 426 aa21.54■■□□□ 1.04
NEK3-208ENST00000618534 WDR46O15213 610 aaKnown RBP21.54■■□□□ 1.04
NEK3-208ENST00000618534 BANF1O75531 89 aa21.54■■□□□ 1.04
NEK3-208ENST00000618534 SKAP2O75563 359 aaPredicted RBP21.54■■□□□ 1.04
NEK3-208ENST00000618534 TJP3O95049 919 aa21.54■■□□□ 1.04
NEK3-208ENST00000618534 FGFR1P11362 822 aa21.54■■□□□ 1.04
NEK3-208ENST00000618534 SLC18A1P54219 525 aa21.54■■□□□ 1.04
NEK3-208ENST00000618534 RNASELQ05823 741 aaKnown RBP21.54■■□□□ 1.04
NEK3-208ENST00000618534 ZNF252P-AS1Q0IIN9 211 aa21.54■■□□□ 1.04
NEK3-208ENST00000618534 AGGF1Q8N302 714 aaeCLIP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms