RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 CAPN9O14815 690 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 FOXP2O15409 715 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 DAB1O75553 588 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 CHN1P15882 459 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 CDK9P50750 372 aaKnown RBP9.31□□□□□ -0.92
COMMD3-215ENST00000602574 PRKCQQ04759 706 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 ZNF33BQ06732 778 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 ENPEPQ07075 957 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 LRRC74AQ0VAA2 488 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 MED21Q13503 144 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 CNGA2Q16280 664 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 PRR23CQ6ZRP0 262 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 GALNT13Q8IUC8 556 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 CCDC116Q8IYX3 515 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 ADAMTS16Q8TE57 1224 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 SNX29Q8TEQ0 813 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 SLC39A13Q96H72 371 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 ARL5BQ96KC2 179 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 CAPZA3Q96KX2 299 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 COG8Q96MW5 612 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 MED15Q96RN5 788 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 YME1L1Q96TA2 773 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 UBAC1Q9BSL1 405 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 TBC1D10AQ9BXI6 508 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 DPEP3Q9H4B8 488 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 PAQR5Q9NXK6 330 aaPredicted RBP9.31□□□□□ -0.92
COMMD3-215ENST00000602574 RRN3Q9NYV6 651 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 DNAJC5BQ9UF47 199 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 TRIM33Q9UPN9 1127 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 STARD13Q9Y3M8 1113 aa9.31□□□□□ -0.92
COMMD3-215ENST00000602574 RGPD1P0DJD0 1748 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 DCDC2CA8MYV0 355 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 BACH1O14867 736 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 KPNA5O15131 536 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 SHBGP04278 402 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 TFAP2AP05549 437 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 FAM153BP0C7A2 387 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 ALAS2P22557 587 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 GPR85P60893 370 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 VBP1P61758 197 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 DLG4P78352 724 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 RRS1Q15050 365 aaKnown RBP9.3□□□□□ -0.92
COMMD3-215ENST00000602574 ACAP2Q15057 778 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 SMU1Q2TAY7 513 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 FAM153CQ494X1 144 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 HABP4Q5JVS0 413 aaKnown RBP9.3□□□□□ -0.92
COMMD3-215ENST00000602574 AGAP7PQ5VUJ5 663 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 PRUNE1Q86TP1 453 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 RNF135Q8IUD6 432 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 ACTRT2Q8TDY3 377 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 SEPT1Q8WYJ6 367 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 LRGUKQ96M69 825 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 TSNARE1Q96NA8 513 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 GON7Q9BXV9 100 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 PITHD1Q9GZP4 211 aaPredicted RBP9.3□□□□□ -0.92
COMMD3-215ENST00000602574 SENP6Q9GZR1 1112 aaPredicted RBP9.3□□□□□ -0.92
COMMD3-215ENST00000602574 LSG1Q9H089 658 aaKnown RBP9.3□□□□□ -0.92
COMMD3-215ENST00000602574 KLC2Q9H0B6 622 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 S100A14Q9HCY8 104 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 GPRC5BQ9NZH0 403 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 DTLQ9NZJ0 730 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 IGSF9Q9P2J2 1179 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 ANKMY1Q9P2S6 941 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 FAM153AQ9UHL3 310 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 PNMA3Q9UL41 463 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 NFU1Q9UMS0 254 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 CACNG2Q9Y698 323 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 SOS2Q07890 1332 aaPredicted RBP9.3□□□□□ -0.92
COMMD3-215ENST00000602574 USP42Q9H9J4 1324 aaKnown RBP9.3□□□□□ -0.92
COMMD3-215ENST00000602574 F8W8V4 182 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 KPNA4O00629 521 aaPredicted RBP9.3□□□□□ -0.92
COMMD3-215ENST00000602574 CLPTM1O96005 669 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 IFNA14P01570 189 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 MYBP10242 640 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 KRT13P13646 458 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 KRT5P13647 590 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 PTPN4P29074 926 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 CTNNA1P35221 906 aaKnown RBP9.3□□□□□ -0.92
COMMD3-215ENST00000602574 PAFAH1B1P43034 410 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 ENTPD1P49961 510 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 FXR1P51114 621 aaKnown RBP eCLIP9.3□□□□□ -0.92
COMMD3-215ENST00000602574 STX1BP61266 288 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 RPP38P78345 283 aaKnown RBP9.3□□□□□ -0.92
COMMD3-215ENST00000602574 RBL2Q08999 1139 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 LETM2Q2VYF4 491 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 LSM12Q3MHD2 195 aaKnown RBP9.3□□□□□ -0.92
COMMD3-215ENST00000602574 EGFLAMQ63HQ2 1017 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 ZNF410Q86VK4 478 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 GATAD2AQ86YP4 633 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 NOSTRINQ8IVI9 506 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 AFAP1L2Q8N4X5 818 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 ZFP28Q8NHY6 868 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 SLC7A3Q8WY07 619 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 VPS33AQ96AX1 596 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 HDAC11Q96DB2 347 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 PLEKHA8Q96JA3 519 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 SPACA7Q96KW9 195 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 GAL3ST1Q99999 423 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 PHAXQ9H814 394 aaKnown RBP9.3□□□□□ -0.92
COMMD3-215ENST00000602574 LGR6Q9HBX8 967 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms