RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 SPDYE1Q8NFV5 336 aaPredicted RBP18.14■□□□□ 0.49
SHKBP1-205ENST00000594973 CHMP6Q96FZ7 201 aa18.14■□□□□ 0.49
SHKBP1-205ENST00000594973 PPP1R16BQ96T49 567 aa18.14■□□□□ 0.49
SHKBP1-205ENST00000594973 NUP85Q9BW27 656 aa18.14■□□□□ 0.49
SHKBP1-205ENST00000594973 DDX47Q9H0S4 455 aaKnown RBP18.14■□□□□ 0.49
SHKBP1-205ENST00000594973 PPME1Q9Y570 386 aa18.14■□□□□ 0.49
SHKBP1-205ENST00000594973 UMODL1Q5DID0 1318 aa18.14■□□□□ 0.49
SHKBP1-205ENST00000594973 ZNFX1Q9P2E3 1918 aaKnown RBP18.14■□□□□ 0.49
SHKBP1-205ENST00000594973 B4GALT5O43286 388 aa18.14■□□□□ 0.49
SHKBP1-205ENST00000594973 GAS2O43903 313 aaKnown RBP18.14■□□□□ 0.49
SHKBP1-205ENST00000594973 GRIN3BO60391 1043 aa18.14■□□□□ 0.49
SHKBP1-205ENST00000594973 TMOD1P28289 359 aa18.14■□□□□ 0.49
SHKBP1-205ENST00000594973 PEX19P40855 299 aa18.14■□□□□ 0.49
SHKBP1-205ENST00000594973 OSTNP61366 133 aa18.14■□□□□ 0.49
SHKBP1-205ENST00000594973 ARHGAP1Q07960 439 aa18.14■□□□□ 0.49
SHKBP1-205ENST00000594973 BLMHQ13867 455 aa18.14■□□□□ 0.49
SHKBP1-205ENST00000594973 TRADDQ15628 312 aa18.14■□□□□ 0.49
SHKBP1-205ENST00000594973 PDCD2Q16342 344 aaPredicted RBP18.14■□□□□ 0.49
SHKBP1-205ENST00000594973 ZNF792Q3KQV3 632 aa18.14■□□□□ 0.49
SHKBP1-205ENST00000594973 ODF2Q5BJF6 829 aa18.14■□□□□ 0.49
SHKBP1-205ENST00000594973 ALG3Q92685 438 aa18.14■□□□□ 0.49
SHKBP1-205ENST00000594973 ERAP1Q9NZ08 941 aa18.14■□□□□ 0.49
SHKBP1-205ENST00000594973 IVNS1ABPQ9Y6Y0 642 aa18.14■□□□□ 0.49
SHKBP1-205ENST00000594973 ASAP2O43150 1006 aa18.13■□□□□ 0.49
SHKBP1-205ENST00000594973 HBP1O60381 514 aa18.13■□□□□ 0.49
SHKBP1-205ENST00000594973 ATP2C2O75185 946 aa18.13■□□□□ 0.49
SHKBP1-205ENST00000594973 CSDE1O75534 798 aaKnown RBP18.13■□□□□ 0.49
SHKBP1-205ENST00000594973 CCND1P24385 295 aa18.13■□□□□ 0.49
SHKBP1-205ENST00000594973 SSTR3P32745 418 aaPredicted RBP18.13■□□□□ 0.49
SHKBP1-205ENST00000594973 SLC26A2P50443 739 aa18.13■□□□□ 0.49
SHKBP1-205ENST00000594973 RPS6KA3P51812 740 aa18.13■□□□□ 0.49
SHKBP1-205ENST00000594973 GTF2A2P52657 109 aa18.13■□□□□ 0.49
SHKBP1-205ENST00000594973 CUL2Q13617 745 aa18.13■□□□□ 0.49
SHKBP1-205ENST00000594973 NCOA4Q13772 614 aa18.13■□□□□ 0.49
SHKBP1-205ENST00000594973 TAPT1Q6NXT6 567 aa18.13■□□□□ 0.49
SHKBP1-205ENST00000594973 TMEM270Q6UE05 265 aa18.13■□□□□ 0.49
SHKBP1-205ENST00000594973 EXOC8Q8IYI6 725 aa18.13■□□□□ 0.49
SHKBP1-205ENST00000594973 RASGEF1CQ8N431 466 aa18.13■□□□□ 0.49
SHKBP1-205ENST00000594973 ZNF570Q96NI8 536 aa18.13■□□□□ 0.49
SHKBP1-205ENST00000594973 DIS3Q9Y2L1 958 aaKnown RBP18.13■□□□□ 0.49
SHKBP1-205ENST00000594973 FAM189A1O60320 539 aa18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 ZNF286BP0CG31 522 aa18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 ADCYAP1R1P41586 468 aa18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 NOP14P78316 857 aaKnown RBP18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 C2CD6Q53TS8 623 aa18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 PHLDB2Q86SQ0 1253 aa18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 BRSK2Q8IWQ3 736 aa18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 THNSL1Q8IYQ7 743 aa18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 ZNF564Q8TBZ8 553 aaPredicted RBP18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 GTF3C2Q8WUA4 911 aaPredicted RBP18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 CPA5Q8WXQ8 436 aa18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 KRT35Q92764 455 aa18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 MTMR12Q9C0I1 747 aa18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 SLC5A4Q9NY91 659 aa18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 NUB1Q9Y5A7 615 aa18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 PCDHB4Q9Y5E5 795 aa18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 PCDHB2Q9Y5E7 798 aa18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 A6NHS1 94 aa18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 SART1O43290 800 aaKnown RBP18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 CST3P01034 146 aaPredicted RBP18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 INSRRP14616 1297 aa18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 COMTP21964 271 aa18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 CTNNA1P35221 906 aaKnown RBP18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 MARCKSL1P49006 195 aa18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 HADHBP55084 474 aaKnown RBP18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 CLEC16AQ2KHT3 1053 aa18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 ACAD10Q6JQN1 1059 aa18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 C11orf63Q6NUN7 778 aa18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 AADACL2Q6P093 401 aa18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 CPNE8Q86YQ8 564 aa18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 FAM81BQ96LP2 452 aa18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 C2orf40Q9H1Z8 148 aa18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 MINDY3Q9H8M7 445 aa18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 CNOT8Q9UFF9 292 aaKnown RBP18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 GTF3C4Q9UKN8 822 aa18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 SIP14410 1827 aa18.12■□□□□ 0.49
SHKBP1-205ENST00000594973 LGALS2P05162 132 aa18.11■□□□□ 0.49
SHKBP1-205ENST00000594973 ACO1P21399 889 aaKnown RBP18.11■□□□□ 0.49
SHKBP1-205ENST00000594973 RAB27AP51159 221 aa18.11■□□□□ 0.49
SHKBP1-205ENST00000594973 CCNG1P51959 295 aa18.11■□□□□ 0.49
SHKBP1-205ENST00000594973 LAMC2Q13753 1193 aa18.11■□□□□ 0.49
SHKBP1-205ENST00000594973 UAP1Q16222 522 aaPredicted RBP18.11■□□□□ 0.49
SHKBP1-205ENST00000594973 SLC5A9Q2M3M2 681 aa18.11■□□□□ 0.49
SHKBP1-205ENST00000594973 ERMARDQ5T6L9 678 aa18.11■□□□□ 0.49
SHKBP1-205ENST00000594973 PASD1Q8IV76 773 aa18.11■□□□□ 0.49
SHKBP1-205ENST00000594973 APLFQ8IW19 511 aaPredicted RBP18.11■□□□□ 0.49
SHKBP1-205ENST00000594973 AFG1LQ8WV93 481 aa18.11■□□□□ 0.49
SHKBP1-205ENST00000594973 NR2E1Q9Y466 385 aa18.11■□□□□ 0.49
SHKBP1-205ENST00000594973 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.11■□□□□ 0.49
SHKBP1-205ENST00000594973 OGTO15294 1046 aa18.11■□□□□ 0.49
SHKBP1-205ENST00000594973 CYP1A2P05177 515 aa18.11■□□□□ 0.49
SHKBP1-205ENST00000594973 CLTAP09496 248 aa18.11■□□□□ 0.49
SHKBP1-205ENST00000594973 TFDP1Q14186 410 aa18.11■□□□□ 0.49
SHKBP1-205ENST00000594973 ATF7IP2Q5U623 682 aa18.11■□□□□ 0.49
SHKBP1-205ENST00000594973 FAM43BQ6ZT52 329 aaPredicted RBP18.11■□□□□ 0.49
SHKBP1-205ENST00000594973 DPP9Q86TI2 863 aa18.11■□□□□ 0.49
SHKBP1-205ENST00000594973 AGAP11Q8TF27 550 aa18.11■□□□□ 0.49
SHKBP1-205ENST00000594973 XPO6Q96QU8 1125 aaKnown RBP18.11■□□□□ 0.49
SHKBP1-205ENST00000594973 FAM129AQ9BZQ8 928 aa18.11■□□□□ 0.49
SHKBP1-205ENST00000594973 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms