RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 LTB4R2Q9NPC1 389 aa14.38□□□□□ -0.11
APOC1-209ENST00000592885 TIMM13Q9Y5L4 95 aaPredicted RBP14.38□□□□□ -0.11
APOC1-209ENST00000592885 MTMR11A4FU01 709 aa14.37□□□□□ -0.11
APOC1-209ENST00000592885 ANKRD63C9JTQ0 380 aa14.37□□□□□ -0.11
APOC1-209ENST00000592885 PPEF2O14830 753 aa14.37□□□□□ -0.11
APOC1-209ENST00000592885 MOSPD3O75425 235 aa14.37□□□□□ -0.11
APOC1-209ENST00000592885 VNN2O95498 520 aa14.37□□□□□ -0.11
APOC1-209ENST00000592885 SP9P0CG40 484 aa14.37□□□□□ -0.11
APOC1-209ENST00000592885 MYL4P12829 197 aa14.37□□□□□ -0.11
APOC1-209ENST00000592885 GLULP15104 373 aa14.37□□□□□ -0.11
APOC1-209ENST00000592885 PSMC3P17980 439 aa14.37□□□□□ -0.11
APOC1-209ENST00000592885 RPS9P46781 194 aaKnown RBP14.37□□□□□ -0.11
APOC1-209ENST00000592885 ALDH1A3P47895 512 aa14.37□□□□□ -0.11
APOC1-209ENST00000592885 ACOT2P49753 483 aa14.37□□□□□ -0.11
APOC1-209ENST00000592885 TAF6P49848 677 aa14.37□□□□□ -0.11
APOC1-209ENST00000592885 GUCY2FP51841 1108 aa14.37□□□□□ -0.11
APOC1-209ENST00000592885 SMARCB1Q12824 385 aa14.37□□□□□ -0.11
APOC1-209ENST00000592885 UBXN2BQ14CS0 331 aa14.37□□□□□ -0.11
APOC1-209ENST00000592885 L1TD1Q5T7N2 865 aaKnown RBP14.37□□□□□ -0.11
APOC1-209ENST00000592885 CENPPQ6IPU0 288 aa14.37□□□□□ -0.11
APOC1-209ENST00000592885 ARMCX5Q6P1M9 558 aa14.37□□□□□ -0.11
APOC1-209ENST00000592885 POTEHQ6S545 545 aa14.37□□□□□ -0.11
APOC1-209ENST00000592885 ZNF852Q6ZMS4 543 aa14.37□□□□□ -0.11
APOC1-209ENST00000592885 USP49Q70CQ1 688 aa14.37□□□□□ -0.11
APOC1-209ENST00000592885 DYMQ7RTS9 669 aa14.37□□□□□ -0.11
APOC1-209ENST00000592885 ITIH5Q86UX2 942 aa14.37□□□□□ -0.11
APOC1-209ENST00000592885 C2orf15Q8WU43 125 aaKnown RBP14.37□□□□□ -0.11
APOC1-209ENST00000592885 POMGNT1Q8WZA1 660 aa14.37□□□□□ -0.11
APOC1-209ENST00000592885 IRF7Q92985 503 aa14.37□□□□□ -0.11
APOC1-209ENST00000592885 DNAJC19Q96DA6 116 aa14.37□□□□□ -0.11
APOC1-209ENST00000592885 ZNF560Q96MR9 790 aa14.37□□□□□ -0.11
APOC1-209ENST00000592885 ACCSQ96QU6 501 aa14.37□□□□□ -0.11
APOC1-209ENST00000592885 IER2Q9BTL4 223 aa14.37□□□□□ -0.11
APOC1-209ENST00000592885 TRMT61BQ9BVS5 477 aaKnown RBP14.37□□□□□ -0.11
APOC1-209ENST00000592885 PLA2G2FQ9BZM2 168 aa14.37□□□□□ -0.11
APOC1-209ENST00000592885 MRPL44Q9H9J2 332 aaKnown RBP14.37□□□□□ -0.11
APOC1-209ENST00000592885 FBXO4Q9UKT5 387 aa14.37□□□□□ -0.11
APOC1-209ENST00000592885 FAM186AA6NE01 2351 aa14.37□□□□□ -0.11
APOC1-209ENST00000592885 COL4A3Q01955 1670 aa14.36□□□□□ -0.11
APOC1-209ENST00000592885 SCN1AP35498 2009 aa14.36□□□□□ -0.11
APOC1-209ENST00000592885 FRMD3A2A2Y4 597 aa14.36□□□□□ -0.11
APOC1-209ENST00000592885 MYMKA6NI61 221 aa14.36□□□□□ -0.11
APOC1-209ENST00000592885 FAM170BA6NMN3 283 aa14.36□□□□□ -0.11
APOC1-209ENST00000592885 MAN2B1O00754 1011 aa14.36□□□□□ -0.11
APOC1-209ENST00000592885 SPTLC1O15269 473 aa14.36□□□□□ -0.11
APOC1-209ENST00000592885 LDHAP00338 332 aaKnown RBP14.36□□□□□ -0.11
APOC1-209ENST00000592885 OR4Q2P0C623 313 aa14.36□□□□□ -0.11
APOC1-209ENST00000592885 PNPLA4P41247 253 aa14.36□□□□□ -0.11
APOC1-209ENST00000592885 STAT6P42226 847 aa14.36□□□□□ -0.11
APOC1-209ENST00000592885 DUSP4Q13115 394 aa14.36□□□□□ -0.11
APOC1-209ENST00000592885 SLC39A14Q15043 492 aa14.36□□□□□ -0.11
APOC1-209ENST00000592885 SV2CQ496J9 727 aa14.36□□□□□ -0.11
APOC1-209ENST00000592885 C1orf228Q6PIY5 440 aa14.36□□□□□ -0.11
APOC1-209ENST00000592885 METTL23Q86XA0 190 aa14.36□□□□□ -0.11
APOC1-209ENST00000592885 TMC8Q8IU68 726 aa14.36□□□□□ -0.11
APOC1-209ENST00000592885 HS6ST3Q8IZP7 471 aa14.36□□□□□ -0.11
APOC1-209ENST00000592885 PSMG2Q969U7 264 aa14.36□□□□□ -0.11
APOC1-209ENST00000592885 CLDN23Q96B33 292 aa14.36□□□□□ -0.11
APOC1-209ENST00000592885 MSANTD3Q96H12 275 aa14.36□□□□□ -0.11
APOC1-209ENST00000592885 PGLYRP2Q96PD5 576 aa14.36□□□□□ -0.11
APOC1-209ENST00000592885 LRRC3Q9BY71 257 aa14.36□□□□□ -0.11
APOC1-209ENST00000592885 DNAJC25Q9H1X3 360 aa14.36□□□□□ -0.11
APOC1-209ENST00000592885 BRD9Q9H8M2 597 aa14.36□□□□□ -0.11
APOC1-209ENST00000592885 MTMR6Q9Y217 621 aa14.36□□□□□ -0.11
APOC1-209ENST00000592885 PCDHB13Q9Y5F0 798 aa14.36□□□□□ -0.11
APOC1-209ENST00000592885 TICRRQ7Z2Z1 1910 aa14.36□□□□□ -0.11
APOC1-209ENST00000592885 DMDP11532 3685 aa14.36□□□□□ -0.11
APOC1-209ENST00000592885 TISP43B9A030 160 aa14.35□□□□□ -0.11
APOC1-209ENST00000592885 K7ELQ4 463 aaPredicted RBP14.35□□□□□ -0.11
APOC1-209ENST00000592885 LAMTOR5O43504 91 aa14.35□□□□□ -0.11
APOC1-209ENST00000592885 LMNAP02545 664 aaKnown RBP14.35□□□□□ -0.11
APOC1-209ENST00000592885 GARTP22102 1010 aa14.35□□□□□ -0.11
APOC1-209ENST00000592885 KCNA4P22459 653 aa14.35□□□□□ -0.11
APOC1-209ENST00000592885 NASPP49321 788 aaPredicted RBP14.35□□□□□ -0.11
APOC1-209ENST00000592885 TUFMP49411 452 aaKnown RBP14.35□□□□□ -0.11
APOC1-209ENST00000592885 MLLT6P55198 1093 aaPredicted RBP14.35□□□□□ -0.11
APOC1-209ENST00000592885 CRELD2Q6UXH1 353 aaPredicted RBP14.35□□□□□ -0.11
APOC1-209ENST00000592885 VITQ6UXI7 678 aa14.35□□□□□ -0.11
APOC1-209ENST00000592885 BRSK2Q8IWQ3 736 aa14.35□□□□□ -0.11
APOC1-209ENST00000592885 ADSSL1Q8N142 457 aa14.35□□□□□ -0.11
APOC1-209ENST00000592885 THEM5Q8N1Q8 247 aa14.35□□□□□ -0.11
APOC1-209ENST00000592885 TMEM130Q8N3G9 435 aa14.35□□□□□ -0.11
APOC1-209ENST00000592885 SHKBP1Q8TBC3 707 aa14.35□□□□□ -0.11
APOC1-209ENST00000592885 ZSCAN18Q8TBC5 510 aaPredicted RBP14.35□□□□□ -0.11
APOC1-209ENST00000592885 CLIC6Q96NY7 704 aa14.35□□□□□ -0.11
APOC1-209ENST00000592885 USP28Q96RU2 1077 aa14.35□□□□□ -0.11
APOC1-209ENST00000592885 ZCWPW1Q9H0M4 648 aa14.35□□□□□ -0.11
APOC1-209ENST00000592885 CRISPLD1Q9H336 500 aa14.35□□□□□ -0.11
APOC1-209ENST00000592885 HEBP1Q9NRV9 189 aa14.35□□□□□ -0.11
APOC1-209ENST00000592885 SPATA6Q9NWH7 488 aaPredicted RBP14.35□□□□□ -0.11
APOC1-209ENST00000592885 DPP3Q9NY33 737 aa14.35□□□□□ -0.11
APOC1-209ENST00000592885 ZMYM5Q9UJ78 669 aa14.35□□□□□ -0.11
APOC1-209ENST00000592885 RIF1Q5UIP0 2472 aaKnown RBP14.34□□□□□ -0.11
APOC1-209ENST00000592885 CYB561D2O14569 222 aa14.34□□□□□ -0.11
APOC1-209ENST00000592885 KIAA0391O15091 583 aaKnown RBP14.34□□□□□ -0.11
APOC1-209ENST00000592885 STX6O43752 255 aa14.34□□□□□ -0.11
APOC1-209ENST00000592885 LRRN2O75325 713 aa14.34□□□□□ -0.11
APOC1-209ENST00000592885 GCNT3O95395 438 aa14.34□□□□□ -0.11
APOC1-209ENST00000592885 PDIA4P13667 645 aaKnown RBP14.34□□□□□ -0.11
APOC1-209ENST00000592885 TARSP26639 723 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms