RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 DAB2IPQ5VWQ8 1189 aa12.29□□□□□ -0.44
ZNF540-210ENST00000592533 SWSAP1Q6NVH7 229 aa12.29□□□□□ -0.44
ZNF540-210ENST00000592533 SRRM1Q8IYB3 904 aaKnown RBP12.29□□□□□ -0.44
ZNF540-210ENST00000592533 PLCD3Q8N3E9 789 aa12.29□□□□□ -0.44
ZNF540-210ENST00000592533 RBBP8NLQ8NC74 664 aaPredicted RBP12.29□□□□□ -0.44
ZNF540-210ENST00000592533 L3MBTL3Q96JM7 780 aaPredicted RBP12.29□□□□□ -0.44
ZNF540-210ENST00000592533 DNAJC17Q9NVM6 304 aaKnown RBP12.29□□□□□ -0.44
ZNF540-210ENST00000592533 SLC9A2Q9UBY0 812 aa12.29□□□□□ -0.44
ZNF540-210ENST00000592533 SEPT9Q9UHD8 586 aaPredicted RBP12.29□□□□□ -0.44
ZNF540-210ENST00000592533 ADAMTS5Q9UNA0 930 aa12.29□□□□□ -0.44
ZNF540-210ENST00000592533 PCDHB4Q9Y5E5 795 aa12.29□□□□□ -0.44
ZNF540-210ENST00000592533 CNTNAP2Q9UHC6 1331 aa12.29□□□□□ -0.44
ZNF540-210ENST00000592533 TJP3O95049 919 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 TNNI1P19237 187 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 FOXN2P32314 431 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 ELF1P32519 619 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 NF2P35240 595 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 NAMPTP43490 491 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 WDR4P57081 412 aaKnown RBP12.28□□□□□ -0.44
ZNF540-210ENST00000592533 MGAT5Q09328 741 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 EMC2Q15006 297 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 SPOPLQ6IQ16 392 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 CEP57Q86XR8 500 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 TTLL6Q8N841 843 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 NIPA2Q8N8Q9 360 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 ANKLE1Q8NAG6 615 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 GDAP1Q8TB36 358 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 NSUN6Q8TEA1 469 aaKnown RBP12.28□□□□□ -0.44
ZNF540-210ENST00000592533 TCP11Q8WWU5 503 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 NKD2Q969F2 451 aaPredicted RBP12.28□□□□□ -0.44
ZNF540-210ENST00000592533 PORCNQ9H237 461 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 FETUBQ9UGM5 382 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 ZNF541Q9H0D2 1346 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 A0A0B4J269 797 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 FOXO6A8MYZ6 492 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 SPATA31C2B4DYI2 1134 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 IGF2BP3O00425 579 aaKnown RBP eCLIP12.28□□□□□ -0.44
ZNF540-210ENST00000592533 CD58P19256 250 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 ALDH5A1P51649 535 aaPredicted RBP12.28□□□□□ -0.44
ZNF540-210ENST00000592533 ACTR2P61160 394 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 GRM1Q13255 1194 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 DGKZQ13574 1117 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 OASLQ15646 514 aaKnown RBP12.28□□□□□ -0.44
ZNF540-210ENST00000592533 C2CD6Q53TS8 623 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 SPDYAQ5MJ70 313 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 TMEM270Q6UE05 265 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 FAM84AQ96KN4 292 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 C9orf72Q96LT7 481 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 RMDN2Q96LZ7 410 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 DHX33Q9H6R0 707 aaKnown RBP12.28□□□□□ -0.44
ZNF540-210ENST00000592533 SSU72Q9NP77 194 aaKnown RBP12.28□□□□□ -0.44
ZNF540-210ENST00000592533 RBAKQ9NYW8 714 aaPredicted RBP12.28□□□□□ -0.44
ZNF540-210ENST00000592533 KLHL14Q9P2G3 628 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 BAIAP2L1Q9UHR4 511 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 SMG5Q9UPR3 1016 aaKnown RBP12.28□□□□□ -0.44
ZNF540-210ENST00000592533 SHOC2Q9UQ13 582 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 RIPK3Q9Y572 518 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 RASA4BC9J798 803 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 RASA4O43374 803 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 WFS1O76024 890 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 CALB1P05937 261 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 ITGAVP06756 1048 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 SUPT20HL2P0C7V6 817 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 ARL2P36404 184 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 VPS41P49754 854 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 NOP14P78316 857 aaKnown RBP12.28□□□□□ -0.44
ZNF540-210ENST00000592533 ZNF252P-AS1Q0IIN9 211 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 MTMR2Q13614 643 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 SUPT20HL1Q3ZLR7 823 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 ZC3H12AQ5D1E8 599 aaKnown RBP12.28□□□□□ -0.44
ZNF540-210ENST00000592533 PPP1R15BQ5SWA1 713 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 LMBRD2Q68DH5 695 aaPredicted RBP12.28□□□□□ -0.44
ZNF540-210ENST00000592533 TRMT1LQ7Z2T5 733 aaKnown RBP12.28□□□□□ -0.44
ZNF540-210ENST00000592533 GIMAP7Q8NHV1 300 aa12.28□□□□□ -0.44
ZNF540-210ENST00000592533 ZNF277Q9NRM2 450 aaPredicted RBP12.28□□□□□ -0.44
ZNF540-210ENST00000592533 CTDP1Q9Y5B0 961 aaPredicted RBP12.28□□□□□ -0.44
ZNF540-210ENST00000592533 ATP2A1O14983 1001 aa12.27□□□□□ -0.44
ZNF540-210ENST00000592533 ALOX15BO15296 676 aa12.27□□□□□ -0.44
ZNF540-210ENST00000592533 ATG7O95352 703 aa12.27□□□□□ -0.44
ZNF540-210ENST00000592533 CDH5P33151 784 aaPredicted RBP12.27□□□□□ -0.44
ZNF540-210ENST00000592533 AP3M2P53677 418 aa12.27□□□□□ -0.44
ZNF540-210ENST00000592533 TAP1Q03518 808 aa12.27□□□□□ -0.44
ZNF540-210ENST00000592533 PHLDB2Q86SQ0 1253 aa12.27□□□□□ -0.44
ZNF540-210ENST00000592533 ECHDC2Q86YB7 292 aa12.27□□□□□ -0.44
ZNF540-210ENST00000592533 ATG4CQ96DT6 458 aa12.27□□□□□ -0.44
ZNF540-210ENST00000592533 TMEM134Q9H6X4 195 aa12.27□□□□□ -0.44
ZNF540-210ENST00000592533 MYOZ2Q9NPC6 264 aa12.27□□□□□ -0.44
ZNF540-210ENST00000592533 SLC24A2Q9UI40 661 aa12.27□□□□□ -0.44
ZNF540-210ENST00000592533 DNPEPQ9ULA0 475 aa12.27□□□□□ -0.44
ZNF540-210ENST00000592533 NUB1Q9Y5A7 615 aa12.27□□□□□ -0.44
ZNF540-210ENST00000592533 MAFBQ9Y5Q3 323 aaPredicted RBP12.27□□□□□ -0.44
ZNF540-210ENST00000592533 EXOC1LA0A1B0GW35 172 aa12.27□□□□□ -0.45
ZNF540-210ENST00000592533 UNC5CO95185 931 aa12.27□□□□□ -0.45
ZNF540-210ENST00000592533 ACOT2P49753 483 aa12.27□□□□□ -0.45
ZNF540-210ENST00000592533 YARSP54577 528 aaKnown RBP12.27□□□□□ -0.45
ZNF540-210ENST00000592533 VCPP55072 806 aaKnown RBP12.27□□□□□ -0.45
ZNF540-210ENST00000592533 MOGSQ13724 837 aa12.27□□□□□ -0.45
ZNF540-210ENST00000592533 TNFAIP1Q13829 316 aa12.27□□□□□ -0.45
ZNF540-210ENST00000592533 RNASEH2BQ5TBB1 312 aaKnown RBP12.27□□□□□ -0.45
ZNF540-210ENST00000592533 PNMA8AQ86V59 439 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms