RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 ZBED3Q96IU2 234 aaPredicted RBP13.1□□□□□ -0.31
PDE4A-207ENST00000590407 C9orf72Q96LT7 481 aa13.1□□□□□ -0.31
PDE4A-207ENST00000590407 SLITRK1Q96PX8 696 aa13.1□□□□□ -0.31
PDE4A-207ENST00000590407 FNBP1Q96RU3 617 aa13.1□□□□□ -0.31
PDE4A-207ENST00000590407 RMDN3Q96TC7 470 aa13.1□□□□□ -0.31
PDE4A-207ENST00000590407 SH2D3AQ9BRG2 576 aa13.1□□□□□ -0.31
PDE4A-207ENST00000590407 HEMGNQ9BXL5 484 aa13.1□□□□□ -0.31
PDE4A-207ENST00000590407 ZNF341Q9BYN7 854 aa13.1□□□□□ -0.31
PDE4A-207ENST00000590407 XPNPEP1Q9NQW7 623 aa13.1□□□□□ -0.31
PDE4A-207ENST00000590407 EFR3BQ9Y2G0 817 aa13.1□□□□□ -0.31
PDE4A-207ENST00000590407 GSTTP1A0A1W2PQM5 241 aa13.09□□□□□ -0.31
PDE4A-207ENST00000590407 TMEM191CA6NGB0 347 aa13.09□□□□□ -0.31
PDE4A-207ENST00000590407 EDF1O60869 148 aaKnown RBP13.09□□□□□ -0.31
PDE4A-207ENST00000590407 VNN1O95497 513 aa13.09□□□□□ -0.31
PDE4A-207ENST00000590407 LSM8O95777 96 aaKnown RBP13.09□□□□□ -0.31
PDE4A-207ENST00000590407 ITGAVP06756 1048 aa13.09□□□□□ -0.31
PDE4A-207ENST00000590407 TMEM191BP0C7N4 346 aa13.09□□□□□ -0.31
PDE4A-207ENST00000590407 MMP8P22894 467 aa13.09□□□□□ -0.31
PDE4A-207ENST00000590407 LLGL1Q15334 1064 aa13.09□□□□□ -0.31
PDE4A-207ENST00000590407 TMED2Q15363 201 aa13.09□□□□□ -0.31
PDE4A-207ENST00000590407 OASLQ15646 514 aaKnown RBP13.09□□□□□ -0.31
PDE4A-207ENST00000590407 SLFN12LQ6IEE8 588 aa13.09□□□□□ -0.31
PDE4A-207ENST00000590407 UBR7Q8N806 425 aa13.09□□□□□ -0.31
PDE4A-207ENST00000590407 PWWP2AQ96N64 755 aa13.09□□□□□ -0.31
PDE4A-207ENST00000590407 C11orf70Q9BRQ4 267 aa13.09□□□□□ -0.31
PDE4A-207ENST00000590407 PCDH9Q9HC56 1237 aa13.09□□□□□ -0.31
PDE4A-207ENST00000590407 SAYSD1Q9NPB0 183 aa13.09□□□□□ -0.31
PDE4A-207ENST00000590407 DNAJC17Q9NVM6 304 aaKnown RBP13.09□□□□□ -0.31
PDE4A-207ENST00000590407 SIP14410 1827 aa13.09□□□□□ -0.31
PDE4A-207ENST00000590407 BRWD3Q6RI45 1802 aa13.09□□□□□ -0.31
PDE4A-207ENST00000590407 TCRBV5S1A1TA0A578 114 aa13.09□□□□□ -0.31
PDE4A-207ENST00000590407 TLR3O15455 904 aaKnown RBP13.09□□□□□ -0.31
PDE4A-207ENST00000590407 HNRNPCL1O60812 293 aaKnown RBP13.09□□□□□ -0.31
PDE4A-207ENST00000590407 LDHAP00338 332 aaKnown RBP13.09□□□□□ -0.31
PDE4A-207ENST00000590407 PSAPP07602 524 aa13.09□□□□□ -0.31
PDE4A-207ENST00000590407 MYCLP12524 364 aaPredicted RBP13.09□□□□□ -0.31
PDE4A-207ENST00000590407 TSHRP16473 764 aa13.09□□□□□ -0.31
PDE4A-207ENST00000590407 GNA15P30679 374 aa13.09□□□□□ -0.31
PDE4A-207ENST00000590407 ALDH3A1P30838 453 aa13.09□□□□□ -0.31
PDE4A-207ENST00000590407 VPS41P49754 854 aa13.09□□□□□ -0.31
PDE4A-207ENST00000590407 LIG4P49917 911 aa13.09□□□□□ -0.31
PDE4A-207ENST00000590407 VCPP55072 806 aaKnown RBP13.09□□□□□ -0.31
PDE4A-207ENST00000590407 CMPK2Q5EBM0 449 aa13.09□□□□□ -0.31
PDE4A-207ENST00000590407 EFHC2Q5JST6 749 aa13.09□□□□□ -0.31
PDE4A-207ENST00000590407 GSTA5Q7RTV2 222 aa13.09□□□□□ -0.31
PDE4A-207ENST00000590407 NIPA2Q8N8Q9 360 aa13.09□□□□□ -0.31
PDE4A-207ENST00000590407 SMC6Q96SB8 1091 aa13.09□□□□□ -0.31
PDE4A-207ENST00000590407 CGRRF1Q99675 332 aa13.09□□□□□ -0.31
PDE4A-207ENST00000590407 TMEM39BQ9GZU3 492 aa13.09□□□□□ -0.31
PDE4A-207ENST00000590407 TRABDQ9H4I3 376 aa13.09□□□□□ -0.31
PDE4A-207ENST00000590407 RAVER2Q9HCJ3 691 aaKnown RBP13.09□□□□□ -0.31
PDE4A-207ENST00000590407 MLXIPLQ9NP71 852 aa13.09□□□□□ -0.31
PDE4A-207ENST00000590407 DDX56Q9NY93 547 aaKnown RBP13.09□□□□□ -0.31
PDE4A-207ENST00000590407 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.09□□□□□ -0.31
PDE4A-207ENST00000590407 GABBR1Q9UBS5 961 aa13.09□□□□□ -0.31
PDE4A-207ENST00000590407 TBK1Q9UHD2 729 aa13.09□□□□□ -0.31
PDE4A-207ENST00000590407 PCDHB4Q9Y5E5 795 aa13.09□□□□□ -0.31
PDE4A-207ENST00000590407 SMAPO00193 183 aa13.08□□□□□ -0.32
PDE4A-207ENST00000590407 ATP2A1O14983 1001 aa13.08□□□□□ -0.32
PDE4A-207ENST00000590407 TYROBPO43914 113 aa13.08□□□□□ -0.32
PDE4A-207ENST00000590407 CALCAP01258 141 aa13.08□□□□□ -0.32
PDE4A-207ENST00000590407 CALB1P05937 261 aa13.08□□□□□ -0.32
PDE4A-207ENST00000590407 KCNA2P16389 499 aa13.08□□□□□ -0.32
PDE4A-207ENST00000590407 AP3M2P53677 418 aa13.08□□□□□ -0.32
PDE4A-207ENST00000590407 SF3A3Q12874 501 aaKnown RBP eCLIP13.08□□□□□ -0.32
PDE4A-207ENST00000590407 RNASEH2BQ5TBB1 312 aaKnown RBP13.08□□□□□ -0.32
PDE4A-207ENST00000590407 ARHGEF16Q5VV41 709 aa13.08□□□□□ -0.32
PDE4A-207ENST00000590407 CENPUQ71F23 418 aa13.08□□□□□ -0.32
PDE4A-207ENST00000590407 PCGF5Q86SE9 256 aa13.08□□□□□ -0.32
PDE4A-207ENST00000590407 KIF2BQ8N4N8 673 aa13.08□□□□□ -0.32
PDE4A-207ENST00000590407 RBBP8NLQ8NC74 664 aaPredicted RBP13.08□□□□□ -0.32
PDE4A-207ENST00000590407 BICD1Q96G01 975 aa13.08□□□□□ -0.32
PDE4A-207ENST00000590407 CDHR1Q96JP9 859 aa13.08□□□□□ -0.32
PDE4A-207ENST00000590407 ZNF518BQ9C0D4 1074 aa13.08□□□□□ -0.32
PDE4A-207ENST00000590407 VPS33BQ9H267 617 aa13.08□□□□□ -0.32
PDE4A-207ENST00000590407 APOBEC3GQ9HC16 384 aaKnown RBP13.08□□□□□ -0.32
PDE4A-207ENST00000590407 CYLDQ9NQC7 956 aa13.08□□□□□ -0.32
PDE4A-207ENST00000590407 CYP26B1Q9NR63 512 aa13.08□□□□□ -0.32
PDE4A-207ENST00000590407 SLC5A4Q9NY91 659 aa13.08□□□□□ -0.32
PDE4A-207ENST00000590407 GGT7Q9UJ14 662 aa13.08□□□□□ -0.32
PDE4A-207ENST00000590407 AGO2Q9UKV8 859 aaKnown RBP13.08□□□□□ -0.32
PDE4A-207ENST00000590407 DNPEPQ9ULA0 475 aa13.08□□□□□ -0.32
PDE4A-207ENST00000590407 PHTF1Q9UMS5 762 aa13.08□□□□□ -0.32
PDE4A-207ENST00000590407 SUFUQ9UMX1 484 aa13.08□□□□□ -0.32
PDE4A-207ENST00000590407 L3MBTL1Q9Y468 752 aa13.08□□□□□ -0.32
PDE4A-207ENST00000590407 CEP83Q9Y592 693 aa13.08□□□□□ -0.32
PDE4A-207ENST00000590407 FOXO6A8MYZ6 492 aa13.07□□□□□ -0.32
PDE4A-207ENST00000590407 STAM2O75886 525 aa13.07□□□□□ -0.32
PDE4A-207ENST00000590407 ZWINTO95229 277 aa13.07□□□□□ -0.32
PDE4A-207ENST00000590407 PECAM1P16284 738 aaPredicted RBP13.07□□□□□ -0.32
PDE4A-207ENST00000590407 ATP2A2P16615 1042 aaKnown RBP13.07□□□□□ -0.32
PDE4A-207ENST00000590407 TNNI1P19237 187 aa13.07□□□□□ -0.32
PDE4A-207ENST00000590407 CD58P19256 250 aa13.07□□□□□ -0.32
PDE4A-207ENST00000590407 RASSF2P50749 326 aa13.07□□□□□ -0.32
PDE4A-207ENST00000590407 GRM1Q13255 1194 aa13.07□□□□□ -0.32
PDE4A-207ENST00000590407 TBC1D10BQ4KMP7 808 aaPredicted RBP13.07□□□□□ -0.32
PDE4A-207ENST00000590407 XKR3Q5GH77 459 aa13.07□□□□□ -0.32
PDE4A-207ENST00000590407 CYP4F22Q6NT55 531 aa13.07□□□□□ -0.32
PDE4A-207ENST00000590407 LLGL2Q6P1M3 1020 aa13.07□□□□□ -0.32
PDE4A-207ENST00000590407 SAMD1Q6SPF0 538 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms