RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 GLIS3Q8NEA6 775 aa25.09■■□□□ 1.61
LSM7-203ENST00000585409 SPATA20Q8TB22 786 aa25.09■■□□□ 1.61
LSM7-203ENST00000585409 HASPINQ8TF76 798 aa25.09■■□□□ 1.61
LSM7-203ENST00000585409 DDX23Q9BUQ8 820 aaKnown RBP25.09■■□□□ 1.61
LSM7-203ENST00000585409 SLC38A7Q9NVC3 462 aa25.09■■□□□ 1.61
LSM7-203ENST00000585409 CEP250Q9BV73 2442 aa25.09■■□□□ 1.61
LSM7-203ENST00000585409 CASTOR2A6NHX0 329 aa25.08■■□□□ 1.61
LSM7-203ENST00000585409 XPOTO43592 962 aaKnown RBP25.08■■□□□ 1.61
LSM7-203ENST00000585409 LRRN2O75325 713 aa25.08■■□□□ 1.61
LSM7-203ENST00000585409 C8AP07357 584 aa25.08■■□□□ 1.61
LSM7-203ENST00000585409 PSMD5Q16401 504 aa25.08■■□□□ 1.61
LSM7-203ENST00000585409 LIN9Q5TKA1 542 aa25.08■■□□□ 1.61
LSM7-203ENST00000585409 FAM171A1Q5VUB5 890 aa25.08■■□□□ 1.61
LSM7-203ENST00000585409 MTSS1LQ765P7 747 aa25.08■■□□□ 1.61
LSM7-203ENST00000585409 GUF1Q8N442 669 aaKnown RBP25.08■■□□□ 1.61
LSM7-203ENST00000585409 FGF13Q92913 245 aa25.08■■□□□ 1.61
LSM7-203ENST00000585409 NUP62CLQ9H1M0 184 aa25.08■■□□□ 1.61
LSM7-203ENST00000585409 CLSTN2Q9H4D0 955 aa25.08■■□□□ 1.61
LSM7-203ENST00000585409 TRIP11Q15643 1979 aa25.07■■□□□ 1.6
LSM7-203ENST00000585409 KANSL1LA0AUZ9 987 aa25.07■■□□□ 1.6
LSM7-203ENST00000585409 CALUO43852 315 aaPredicted RBP25.07■■□□□ 1.6
LSM7-203ENST00000585409 POU2F2P09086 479 aa25.07■■□□□ 1.6
LSM7-203ENST00000585409 PPM1LQ5SGD2 360 aa25.07■■□□□ 1.6
LSM7-203ENST00000585409 TRIML1Q8N9V2 468 aa25.07■■□□□ 1.6
LSM7-203ENST00000585409 SUMF1Q8NBK3 374 aa25.07■■□□□ 1.6
LSM7-203ENST00000585409 RUBCNQ92622 972 aa25.07■■□□□ 1.6
LSM7-203ENST00000585409 CXCL16Q9H2A7 254 aa25.07■■□□□ 1.6
LSM7-203ENST00000585409 PDXKO00764 312 aa25.06■■□□□ 1.6
LSM7-203ENST00000585409 ADAM12O43184 909 aa25.06■■□□□ 1.6
LSM7-203ENST00000585409 EXTL3O43909 919 aa25.06■■□□□ 1.6
LSM7-203ENST00000585409 ELAVL2Q12926 359 aaKnown RBP25.06■■□□□ 1.6
LSM7-203ENST00000585409 ZNF528Q3MIS6 628 aa25.06■■□□□ 1.6
LSM7-203ENST00000585409 PDXDC1Q6P996 788 aa25.06■■□□□ 1.6
LSM7-203ENST00000585409 CEP57Q86XR8 500 aa25.06■■□□□ 1.6
LSM7-203ENST00000585409 GPD1LQ8N335 351 aa25.06■■□□□ 1.6
LSM7-203ENST00000585409 HAPLN2Q9GZV7 340 aa25.06■■□□□ 1.6
LSM7-203ENST00000585409 AGPAT3Q9NRZ7 376 aa25.06■■□□□ 1.6
LSM7-203ENST00000585409 CNTN3Q9P232 1028 aa25.06■■□□□ 1.6
LSM7-203ENST00000585409 CPSF3Q9UKF6 684 aaKnown RBP25.06■■□□□ 1.6
LSM7-203ENST00000585409 CCL16O15467 120 aa25.05■■□□□ 1.6
LSM7-203ENST00000585409 XYLBO75191 536 aa25.05■■□□□ 1.6
LSM7-203ENST00000585409 IL18RAPO95256 599 aa25.05■■□□□ 1.6
LSM7-203ENST00000585409 KCNE1P15382 129 aa25.05■■□□□ 1.6
LSM7-203ENST00000585409 ADSSP30520 456 aa25.05■■□□□ 1.6
LSM7-203ENST00000585409 PRKCQQ04759 706 aa25.05■■□□□ 1.6
LSM7-203ENST00000585409 MLF2Q15773 248 aaPredicted RBP25.05■■□□□ 1.6
LSM7-203ENST00000585409 COBLL1Q53SF7 1204 aa25.05■■□□□ 1.6
LSM7-203ENST00000585409 XKR4Q5GH76 650 aa25.05■■□□□ 1.6
LSM7-203ENST00000585409 DGLUCYQ7Z3D6 616 aa25.05■■□□□ 1.6
LSM7-203ENST00000585409 C12orf56Q8IXR9 622 aa25.05■■□□□ 1.6
LSM7-203ENST00000585409 UROC1Q96N76 676 aa25.05■■□□□ 1.6
LSM7-203ENST00000585409 OSBPL6Q9BZF3 934 aa25.05■■□□□ 1.6
LSM7-203ENST00000585409 GPR179Q6PRD1 2367 aa25.04■■□□□ 1.6
LSM7-203ENST00000585409 MED19A0JLT2 244 aaPredicted RBP25.04■■□□□ 1.6
LSM7-203ENST00000585409 TISP43B9A030 160 aa25.04■■□□□ 1.6
LSM7-203ENST00000585409 CXCL8P10145 99 aa25.04■■□□□ 1.6
LSM7-203ENST00000585409 MCM4P33991 863 aa25.04■■□□□ 1.6
LSM7-203ENST00000585409 HOXD13P35453 343 aa25.04■■□□□ 1.6
LSM7-203ENST00000585409 RAB33AQ14088 237 aa25.04■■□□□ 1.6
LSM7-203ENST00000585409 SURF1Q15526 300 aa25.04■■□□□ 1.6
LSM7-203ENST00000585409 CAMK4Q16566 473 aa25.04■■□□□ 1.6
LSM7-203ENST00000585409 SEZ6Q53EL9 994 aa25.04■■□□□ 1.6
LSM7-203ENST00000585409 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.04■■□□□ 1.6
LSM7-203ENST00000585409 XXYLT1Q8NBI6 393 aa25.04■■□□□ 1.6
LSM7-203ENST00000585409 ITFG1Q8TB96 612 aa25.04■■□□□ 1.6
LSM7-203ENST00000585409 SLC7A14Q8TBB6 771 aa25.04■■□□□ 1.6
LSM7-203ENST00000585409 NOC3LQ8WTT2 800 aaKnown RBP25.04■■□□□ 1.6
LSM7-203ENST00000585409 CBWD1Q9BRT8 395 aa25.04■■□□□ 1.6
LSM7-203ENST00000585409 FAM213AQ9BRX8 229 aa25.04■■□□□ 1.6
LSM7-203ENST00000585409 ASB7Q9H672 318 aa25.04■■□□□ 1.6
LSM7-203ENST00000585409 HSPBP1Q9NZL4 362 aa25.04■■□□□ 1.6
LSM7-203ENST00000585409 KIAA1468Q9P260 1216 aa25.04■■□□□ 1.6
LSM7-203ENST00000585409 FBXO4Q9UKT5 387 aa25.04■■□□□ 1.6
LSM7-203ENST00000585409 SMIM28A0A1B0GU29 152 aa25.03■■□□□ 1.6
LSM7-203ENST00000585409 ZNF233A6NK53 670 aa25.03■■□□□ 1.6
LSM7-203ENST00000585409 TGFB1I1O43294 461 aa25.03■■□□□ 1.6
LSM7-203ENST00000585409 FAM189A1O60320 539 aa25.03■■□□□ 1.6
LSM7-203ENST00000585409 RPL13P26373 211 aaKnown RBP25.03■■□□□ 1.6
LSM7-203ENST00000585409 ACOT2P49753 483 aa25.03■■□□□ 1.6
LSM7-203ENST00000585409 MYBPC2Q14324 1141 aa25.03■■□□□ 1.6
LSM7-203ENST00000585409 PUM1Q14671 1186 aaKnown RBP eCLIP25.03■■□□□ 1.69e-10■■□□□ 12.5
LSM7-203ENST00000585409 UVSSAQ2YD98 709 aa25.03■■□□□ 1.6
LSM7-203ENST00000585409 SLC10A6Q3KNW5 377 aa25.03■■□□□ 1.6
LSM7-203ENST00000585409 SLC44A4Q53GD3 710 aa25.03■■□□□ 1.6
LSM7-203ENST00000585409 ALKAL1Q6UXT8 129 aa25.03■■□□□ 1.6
LSM7-203ENST00000585409 RSPO2Q6UXX9 243 aaPredicted RBP25.03■■□□□ 1.6
LSM7-203ENST00000585409 DCLK2Q8N568 766 aa25.03■■□□□ 1.6
LSM7-203ENST00000585409 FAM212AQ96EL1 285 aa25.03■■□□□ 1.6
LSM7-203ENST00000585409 BORCS6Q96GS4 357 aa25.03■■□□□ 1.6
LSM7-203ENST00000585409 TSG101Q99816 390 aa25.03■■□□□ 1.6
LSM7-203ENST00000585409 HINFPQ9BQA5 517 aa25.03■■□□□ 1.6
LSM7-203ENST00000585409 BCO2Q9BYV7 579 aa25.03■■□□□ 1.6
LSM7-203ENST00000585409 PCIF1Q9H4Z3 704 aa25.03■■□□□ 1.6
LSM7-203ENST00000585409 DLL3Q9NYJ7 618 aa25.03■■□□□ 1.6
LSM7-203ENST00000585409 MAN1B1Q9UKM7 699 aa25.03■■□□□ 1.6
LSM7-203ENST00000585409 DERAQ9Y315 318 aa25.03■■□□□ 1.6
LSM7-203ENST00000585409 MTF2Q9Y483 593 aaPredicted RBP25.03■■□□□ 1.6
LSM7-203ENST00000585409 CITO14578 2027 aa25.02■■□□□ 1.6
LSM7-203ENST00000585409 TTC26A0AVF1 554 aa25.02■■□□□ 1.6
LSM7-203ENST00000585409 TMEM189-UBE2V1I3L0A0 370 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms