RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 CEP290O15078 2479 aa13.83□□□□□ -0.2
TRIM47-202ENST00000585333 F8VZ95 297 aa13.83□□□□□ -0.2
TRIM47-202ENST00000585333 H7C4K7 107 aa13.83□□□□□ -0.2
TRIM47-202ENST00000585333 M0QZQ0 153 aa13.83□□□□□ -0.2
TRIM47-202ENST00000585333 MFAP3LO75121 409 aa13.83□□□□□ -0.2
TRIM47-202ENST00000585333 GYPCP04921 128 aa13.83□□□□□ -0.2
TRIM47-202ENST00000585333 CYP11A1P05108 521 aa13.83□□□□□ -0.2
TRIM47-202ENST00000585333 RB1P06400 928 aa13.83□□□□□ -0.2
TRIM47-202ENST00000585333 PAEPP09466 180 aa13.83□□□□□ -0.2
TRIM47-202ENST00000585333 SOX5P35711 763 aa13.83□□□□□ -0.2
TRIM47-202ENST00000585333 ASPAP45381 313 aa13.83□□□□□ -0.2
TRIM47-202ENST00000585333 AFF1P51825 1210 aaKnown RBP13.83□□□□□ -0.2
TRIM47-202ENST00000585333 GUCY2FP51841 1108 aa13.83□□□□□ -0.2
TRIM47-202ENST00000585333 PTK2Q05397 1052 aa13.83□□□□□ -0.2
TRIM47-202ENST00000585333 INCA1Q0VD86 236 aa13.83□□□□□ -0.2
TRIM47-202ENST00000585333 TBX2Q13207 712 aaPredicted RBP13.83□□□□□ -0.2
TRIM47-202ENST00000585333 DRAP1Q14919 205 aaPredicted RBP13.83□□□□□ -0.2
TRIM47-202ENST00000585333 STILQ15468 1287 aa13.83□□□□□ -0.2
TRIM47-202ENST00000585333 MAPRE1Q15691 268 aaKnown RBP13.83□□□□□ -0.2
TRIM47-202ENST00000585333 IQCEQ6IPM2 695 aa13.83□□□□□ -0.2
TRIM47-202ENST00000585333 PPP1R2P3Q6NXS1 205 aa13.83□□□□□ -0.2
TRIM47-202ENST00000585333 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.83□□□□□ -0.2
TRIM47-202ENST00000585333 RRAGAQ7L523 313 aa13.83□□□□□ -0.2
TRIM47-202ENST00000585333 ADGRF2Q8IZF7 708 aa13.83□□□□□ -0.2
TRIM47-202ENST00000585333 TDHQ8IZJ6 230 aa13.83□□□□□ -0.2
TRIM47-202ENST00000585333 SENP8Q96LD8 212 aa13.83□□□□□ -0.2
TRIM47-202ENST00000585333 PANX2Q96RD6 677 aa13.83□□□□□ -0.2
TRIM47-202ENST00000585333 PI4K2AQ9BTU6 479 aa13.83□□□□□ -0.2
TRIM47-202ENST00000585333 CWH43Q9H720 699 aa13.83□□□□□ -0.2
TRIM47-202ENST00000585333 BARX2Q9UMQ3 279 aaPredicted RBP13.83□□□□□ -0.2
TRIM47-202ENST00000585333 PRG3Q9Y2Y8 225 aaPredicted RBP13.83□□□□□ -0.2
TRIM47-202ENST00000585333 FHOD1Q9Y613 1164 aa13.83□□□□□ -0.2
TRIM47-202ENST00000585333 TRIP11Q15643 1979 aa13.83□□□□□ -0.2
TRIM47-202ENST00000585333 FNDC1Q4ZHG4 1894 aaPredicted RBP13.82□□□□□ -0.2
TRIM47-202ENST00000585333 MED7O43513 233 aa13.82□□□□□ -0.2
TRIM47-202ENST00000585333 NOL4O94818 638 aa13.82□□□□□ -0.2
TRIM47-202ENST00000585333 KRT5P13647 590 aa13.82□□□□□ -0.2
TRIM47-202ENST00000585333 WARSP23381 471 aaKnown RBP13.82□□□□□ -0.2
TRIM47-202ENST00000585333 CASP14P31944 242 aa13.82□□□□□ -0.2
TRIM47-202ENST00000585333 SLC11A1P49279 550 aa13.82□□□□□ -0.2
TRIM47-202ENST00000585333 PDE6CP51160 858 aa13.82□□□□□ -0.2
TRIM47-202ENST00000585333 UBE3AQ05086 875 aa13.82□□□□□ -0.2
TRIM47-202ENST00000585333 SMARCB1Q12824 385 aa13.82□□□□□ -0.2
TRIM47-202ENST00000585333 ARID5BQ14865 1188 aa13.82□□□□□ -0.2
TRIM47-202ENST00000585333 SHHQ15465 462 aa13.82□□□□□ -0.2
TRIM47-202ENST00000585333 ASIC2Q16515 512 aa13.82□□□□□ -0.2
TRIM47-202ENST00000585333 ARHGAP44Q17R89 818 aa13.82□□□□□ -0.2
TRIM47-202ENST00000585333 USP41Q3LFD5 358 aa13.82□□□□□ -0.2
TRIM47-202ENST00000585333 FUT10Q6P4F1 479 aa13.82□□□□□ -0.2
TRIM47-202ENST00000585333 ANKS3Q6ZW76 656 aa13.82□□□□□ -0.2
TRIM47-202ENST00000585333 ZNF677Q86XU0 584 aa13.82□□□□□ -0.2
TRIM47-202ENST00000585333 COLGALT1Q8NBJ5 622 aa13.82□□□□□ -0.2
TRIM47-202ENST00000585333 SPC24Q8NBT2 197 aa13.82□□□□□ -0.2
TRIM47-202ENST00000585333 IGSF21Q96ID5 467 aa13.82□□□□□ -0.2
TRIM47-202ENST00000585333 DNAJC7Q99615 494 aa13.82□□□□□ -0.2
TRIM47-202ENST00000585333 C11orf84Q9BUA3 381 aaPredicted RBP13.82□□□□□ -0.2
TRIM47-202ENST00000585333 NT5C1AQ9BXI3 368 aa13.82□□□□□ -0.2
TRIM47-202ENST00000585333 NLRC4Q9NPP4 1024 aa13.82□□□□□ -0.2
TRIM47-202ENST00000585333 CISHQ9NSE2 258 aa13.82□□□□□ -0.2
TRIM47-202ENST00000585333 AIPL1Q9NZN9 384 aa13.82□□□□□ -0.2
TRIM47-202ENST00000585333 DNAJB4Q9UDY4 337 aa13.82□□□□□ -0.2
TRIM47-202ENST00000585333 CNTN6Q9UQ52 1028 aa13.82□□□□□ -0.2
TRIM47-202ENST00000585333 LZTS1Q9Y250 596 aa13.82□□□□□ -0.2
TRIM47-202ENST00000585333 PCDHB4Q9Y5E5 795 aa13.82□□□□□ -0.2
TRIM47-202ENST00000585333 MRPL42Q9Y6G3 142 aaKnown RBP13.82□□□□□ -0.2
TRIM47-202ENST00000585333 GFPT2O94808 682 aa13.81□□□□□ -0.2
TRIM47-202ENST00000585333 IPO7O95373 1038 aaKnown RBP13.81□□□□□ -0.2
TRIM47-202ENST00000585333 HNRNPH3P31942 346 aaKnown RBP13.81□□□□□ -0.2
TRIM47-202ENST00000585333 USP8P40818 1118 aa13.81□□□□□ -0.2
TRIM47-202ENST00000585333 GATMP50440 423 aa13.81□□□□□ -0.2
TRIM47-202ENST00000585333 JAM2P57087 298 aa13.81□□□□□ -0.2
TRIM47-202ENST00000585333 CDK17Q00537 523 aa13.81□□□□□ -0.2
TRIM47-202ENST00000585333 TSPY1Q01534 308 aa13.81□□□□□ -0.2
TRIM47-202ENST00000585333 PLCB3Q01970 1234 aa13.81□□□□□ -0.2
TRIM47-202ENST00000585333 YWHAHQ04917 246 aaPredicted RBP13.81□□□□□ -0.2
TRIM47-202ENST00000585333 MEA1Q16626 185 aa13.81□□□□□ -0.2
TRIM47-202ENST00000585333 SPOPLQ6IQ16 392 aa13.81□□□□□ -0.2
TRIM47-202ENST00000585333 ZNF280DQ6N043 979 aa13.81□□□□□ -0.2
TRIM47-202ENST00000585333 KIAA1841Q6NSI8 718 aa13.81□□□□□ -0.2
TRIM47-202ENST00000585333 LIMS2Q7Z4I7 341 aa13.81□□□□□ -0.2
TRIM47-202ENST00000585333 ARHGEF19Q8IW93 802 aa13.81□□□□□ -0.2
TRIM47-202ENST00000585333 FAM71AQ8IYT1 594 aa13.81□□□□□ -0.2
TRIM47-202ENST00000585333 SLC39A11Q8N1S5 342 aa13.81□□□□□ -0.2
TRIM47-202ENST00000585333 TXLNBQ8N3L3 684 aa13.81□□□□□ -0.2
TRIM47-202ENST00000585333 CPLX3Q8WVH0 158 aa13.81□□□□□ -0.2
TRIM47-202ENST00000585333 TATDN2Q93075 761 aa13.81□□□□□ -0.2
TRIM47-202ENST00000585333 PPP1R9BQ96SB3 815 aa13.81□□□□□ -0.2
TRIM47-202ENST00000585333 CXCL16Q9H2A7 254 aa13.81□□□□□ -0.2
TRIM47-202ENST00000585333 APOBEC3GQ9HC16 384 aaKnown RBP13.81□□□□□ -0.2
TRIM47-202ENST00000585333 LUC7LQ9NQ29 371 aaKnown RBP13.81□□□□□ -0.2
TRIM47-202ENST00000585333 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.81□□□□□ -0.2
TRIM47-202ENST00000585333 ABHD10Q9NUJ1 306 aa13.81□□□□□ -0.2
TRIM47-202ENST00000585333 CEP83Q9Y592 693 aa13.81□□□□□ -0.2
TRIM47-202ENST00000585333 ATP8B3O60423 1300 aa13.81□□□□□ -0.2
TRIM47-202ENST00000585333 OR6C75A6NL08 312 aa13.8□□□□□ -0.2
TRIM47-202ENST00000585333 LRRC53A6NM62 1247 aa13.8□□□□□ -0.2
TRIM47-202ENST00000585333 A8MXQ7 604 aa13.8□□□□□ -0.2
TRIM47-202ENST00000585333 LPXNO60711 386 aa13.8□□□□□ -0.2
TRIM47-202ENST00000585333 CILPO75339 1184 aa13.8□□□□□ -0.2
TRIM47-202ENST00000585333 SERPING1P05155 500 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms