RNA–Protein interactions for RNA: ENST00000581832.1

SMARCD2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-209ENST00000581832 OR5B17Q8NGF7 314 aa13.38□□□□□ -0.27
SMARCD2-209ENST00000581832 ACSF2Q96CM8 615 aaPredicted RBP13.38□□□□□ -0.27
SMARCD2-209ENST00000581832 CRISPLD1Q9H336 500 aa13.38□□□□□ -0.27
SMARCD2-209ENST00000581832 KCNK12Q9HB15 430 aa13.38□□□□□ -0.27
SMARCD2-209ENST00000581832 PIDD1Q9HB75 910 aa13.38□□□□□ -0.27
SMARCD2-209ENST00000581832 KIAA1586Q9HCI6 787 aa13.38□□□□□ -0.27
SMARCD2-209ENST00000581832 DMAC2Q9NW81 257 aa13.38□□□□□ -0.27
SMARCD2-209ENST00000581832 HCFC1R1Q9NWW0 138 aa13.38□□□□□ -0.27
SMARCD2-209ENST00000581832 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.38□□□□□ -0.27
SMARCD2-209ENST00000581832 RAPGEFL1Q9UHV5 662 aa13.38□□□□□ -0.27
SMARCD2-209ENST00000581832 MAFFQ9ULX9 164 aa13.38□□□□□ -0.27
SMARCD2-209ENST00000581832 SORCS3Q9UPU3 1222 aa13.38□□□□□ -0.27
SMARCD2-209ENST00000581832 CACNA1HO95180 2353 aa13.38□□□□□ -0.27
SMARCD2-209ENST00000581832 OR6C75A6NL08 312 aa13.37□□□□□ -0.27
SMARCD2-209ENST00000581832 KPNA7A9QM74 516 aa13.37□□□□□ -0.27
SMARCD2-209ENST00000581832 NRG2O14511 850 aaPredicted RBP13.37□□□□□ -0.27
SMARCD2-209ENST00000581832 CYB561D2O14569 222 aa13.37□□□□□ -0.27
SMARCD2-209ENST00000581832 RHOBTB3O94955 611 aa13.37□□□□□ -0.27
SMARCD2-209ENST00000581832 RPN1P04843 607 aaKnown RBP13.37□□□□□ -0.27
SMARCD2-209ENST00000581832 ITGB3P05106 788 aa13.37□□□□□ -0.27
SMARCD2-209ENST00000581832 ODC1P11926 461 aa13.37□□□□□ -0.27
SMARCD2-209ENST00000581832 COL9A1P20849 921 aa13.37□□□□□ -0.27
SMARCD2-209ENST00000581832 POLR2BP30876 1174 aaKnown RBP13.37□□□□□ -0.27
SMARCD2-209ENST00000581832 ARPP19P56211 112 aa13.37□□□□□ -0.27
SMARCD2-209ENST00000581832 SIGLEC14Q08ET2 396 aa13.37□□□□□ -0.27
SMARCD2-209ENST00000581832 SNW1Q13573 536 aaKnown RBP13.37□□□□□ -0.27
SMARCD2-209ENST00000581832 MYBPC2Q14324 1141 aa13.37□□□□□ -0.27
SMARCD2-209ENST00000581832 SNRNP35Q16560 246 aaKnown RBP13.37□□□□□ -0.27
SMARCD2-209ENST00000581832 LMBRD2Q68DH5 695 aaPredicted RBP13.37□□□□□ -0.27
SMARCD2-209ENST00000581832 LIMS2Q7Z4I7 341 aa13.37□□□□□ -0.27
SMARCD2-209ENST00000581832 FMR1NBQ8N0W7 255 aaPredicted RBP13.37□□□□□ -0.27
SMARCD2-209ENST00000581832 CSGALNACT2Q8N6G5 542 aa13.37□□□□□ -0.27
SMARCD2-209ENST00000581832 OR10T2Q8NGX3 314 aa13.37□□□□□ -0.27
SMARCD2-209ENST00000581832 ITFG1Q8TB96 612 aa13.37□□□□□ -0.27
SMARCD2-209ENST00000581832 CACTINQ8WUQ7 758 aaKnown RBP13.37□□□□□ -0.27
SMARCD2-209ENST00000581832 MFSD14AQ96MC6 490 aa13.37□□□□□ -0.27
SMARCD2-209ENST00000581832 MTMR12Q9C0I1 747 aa13.37□□□□□ -0.27
SMARCD2-209ENST00000581832 CYP4F11Q9HBI6 524 aa13.37□□□□□ -0.27
SMARCD2-209ENST00000581832 AVENQ9NQS1 362 aaPredicted RBP13.37□□□□□ -0.27
SMARCD2-209ENST00000581832 INTS13Q9NVM9 706 aa13.37□□□□□ -0.27
SMARCD2-209ENST00000581832 CGNQ9P2M7 1197 aaKnown RBP13.37□□□□□ -0.27
SMARCD2-209ENST00000581832 ITGA11Q9UKX5 1188 aa13.37□□□□□ -0.27
SMARCD2-209ENST00000581832 INSL5Q9Y5Q6 135 aa13.37□□□□□ -0.27
SMARCD2-209ENST00000581832 TMEM221A6NGB7 291 aa13.36□□□□□ -0.27
SMARCD2-209ENST00000581832 ANHXE9PGG2 379 aa13.36□□□□□ -0.27
SMARCD2-209ENST00000581832 M0R296 226 aa13.36□□□□□ -0.27
SMARCD2-209ENST00000581832 XYLBO75191 536 aa13.36□□□□□ -0.27
SMARCD2-209ENST00000581832 FSHRP23945 695 aa13.36□□□□□ -0.27
SMARCD2-209ENST00000581832 CYP24A1Q07973 514 aa13.36□□□□□ -0.27
SMARCD2-209ENST00000581832 PSMD6Q15008 389 aa13.36□□□□□ -0.27
SMARCD2-209ENST00000581832 SURF1Q15526 300 aa13.36□□□□□ -0.27
SMARCD2-209ENST00000581832 SLC5A9Q2M3M2 681 aa13.36□□□□□ -0.27
SMARCD2-209ENST00000581832 WSCD1Q658N2 575 aa13.36□□□□□ -0.27
SMARCD2-209ENST00000581832 CENPPQ6IPU0 288 aa13.36□□□□□ -0.27
SMARCD2-209ENST00000581832 USP37Q86T82 979 aa13.36□□□□□ -0.27
SMARCD2-209ENST00000581832 LRRTM3Q86VH5 581 aa13.36□□□□□ -0.27
SMARCD2-209ENST00000581832 SLC9A9Q8IVB4 645 aa13.36□□□□□ -0.27
SMARCD2-209ENST00000581832 LRRC52Q8N7C0 313 aa13.36□□□□□ -0.27
SMARCD2-209ENST00000581832 XXYLT1Q8NBI6 393 aa13.36□□□□□ -0.27
SMARCD2-209ENST00000581832 RDH13Q8NBN7 331 aa13.36□□□□□ -0.27
SMARCD2-209ENST00000581832 PLEKHO2Q8TD55 490 aa13.36□□□□□ -0.27
SMARCD2-209ENST00000581832 RSAD2Q8WXG1 361 aa13.36□□□□□ -0.27
SMARCD2-209ENST00000581832 ZNF516Q92618 1163 aa13.36□□□□□ -0.27
SMARCD2-209ENST00000581832 ZCWPW1Q9H0M4 648 aa13.36□□□□□ -0.27
SMARCD2-209ENST00000581832 EXOC1Q9NV70 894 aa13.36□□□□□ -0.27
SMARCD2-209ENST00000581832 GDAP2Q9NXN4 497 aa13.36□□□□□ -0.27
SMARCD2-209ENST00000581832 CEP72Q9P209 647 aa13.36□□□□□ -0.27
SMARCD2-209ENST00000581832 AGAP1Q9UPQ3 857 aa13.36□□□□□ -0.27
SMARCD2-209ENST00000581832 MTMR11A4FU01 709 aa13.35□□□□□ -0.27
SMARCD2-209ENST00000581832 PDXKO00764 312 aa13.35□□□□□ -0.27
SMARCD2-209ENST00000581832 CST3P01034 146 aaPredicted RBP13.35□□□□□ -0.27
SMARCD2-209ENST00000581832 RHOP08100 348 aa13.35□□□□□ -0.27
SMARCD2-209ENST00000581832 CPB1P15086 417 aa13.35□□□□□ -0.27
SMARCD2-209ENST00000581832 GBP2P32456 591 aaPredicted RBP13.35□□□□□ -0.27
SMARCD2-209ENST00000581832 ELF1P32519 619 aa13.35□□□□□ -0.27
SMARCD2-209ENST00000581832 PNPLA4P41247 253 aa13.35□□□□□ -0.27
SMARCD2-209ENST00000581832 CYP2J2P51589 502 aa13.35□□□□□ -0.27
SMARCD2-209ENST00000581832 MTMR3Q13615 1198 aa13.35□□□□□ -0.27
SMARCD2-209ENST00000581832 KCNB1Q14721 858 aa13.35□□□□□ -0.27
SMARCD2-209ENST00000581832 DUOXA2Q1HG44 320 aa13.35□□□□□ -0.27
SMARCD2-209ENST00000581832 SV2CQ496J9 727 aa13.35□□□□□ -0.27
SMARCD2-209ENST00000581832 PABPC1LQ4VXU2 614 aaKnown RBP13.35□□□□□ -0.27
SMARCD2-209ENST00000581832 PRSS36Q5K4E3 855 aa13.35□□□□□ -0.27
SMARCD2-209ENST00000581832 GET4Q7L5D6 327 aaPredicted RBP13.35□□□□□ -0.27
SMARCD2-209ENST00000581832 HS2ST1Q7LGA3 356 aa13.35□□□□□ -0.27
SMARCD2-209ENST00000581832 WDR49Q8IV35 697 aa13.35□□□□□ -0.27
SMARCD2-209ENST00000581832 UBALD2Q8IYN6 164 aa13.35□□□□□ -0.27
SMARCD2-209ENST00000581832 TTC9BQ8N6N2 239 aa13.35□□□□□ -0.27
SMARCD2-209ENST00000581832 NOC3LQ8WTT2 800 aaKnown RBP13.35□□□□□ -0.27
SMARCD2-209ENST00000581832 FGF13Q92913 245 aa13.35□□□□□ -0.27
SMARCD2-209ENST00000581832 ZNF560Q96MR9 790 aa13.35□□□□□ -0.27
SMARCD2-209ENST00000581832 LRRC3Q9BY71 257 aa13.35□□□□□ -0.27
SMARCD2-209ENST00000581832 DNAJC25Q9H1X3 360 aa13.35□□□□□ -0.27
SMARCD2-209ENST00000581832 IGSF9Q9P2J2 1179 aa13.35□□□□□ -0.27
SMARCD2-209ENST00000581832 DSEQ9UL01 958 aa13.35□□□□□ -0.27
SMARCD2-209ENST00000581832 CDH7Q9ULB5 785 aa13.35□□□□□ -0.27
SMARCD2-209ENST00000581832 L1RE1Q9UN81 338 aa13.35□□□□□ -0.27
SMARCD2-209ENST00000581832 POLIQ9UNA4 740 aa13.35□□□□□ -0.27
SMARCD2-209ENST00000581832 TRAF3IP3Q9Y228 551 aa13.35□□□□□ -0.27
SMARCD2-209ENST00000581832 ZFP37Q9Y6Q3 630 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms