RNA–Protein interactions for RNA: ENST00000578194.5

CSNK1D-207, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-207ENST00000578194 CPB1P15086 417 aa13.65□□□□□ -0.22
CSNK1D-207ENST00000578194 CD44P16070 742 aaKnown RBP13.65□□□□□ -0.22
CSNK1D-207ENST00000578194 BMP6P22004 513 aa13.65□□□□□ -0.22
CSNK1D-207ENST00000578194 ARPP19P56211 112 aa13.65□□□□□ -0.22
CSNK1D-207ENST00000578194 PAK1Q13153 545 aa13.65□□□□□ -0.22
CSNK1D-207ENST00000578194 LILRA6Q6PI73 481 aa13.65□□□□□ -0.22
CSNK1D-207ENST00000578194 SYCE2Q6PIF2 218 aa13.65□□□□□ -0.22
CSNK1D-207ENST00000578194 THEM5Q8N1Q8 247 aa13.65□□□□□ -0.22
CSNK1D-207ENST00000578194 MLKLQ8NB16 471 aa13.65□□□□□ -0.22
CSNK1D-207ENST00000578194 KREMEN2Q8NCW0 462 aa13.65□□□□□ -0.22
CSNK1D-207ENST00000578194 CXorf38Q8TB03 319 aa13.65□□□□□ -0.22
CSNK1D-207ENST00000578194 PLEKHO2Q8TD55 490 aa13.65□□□□□ -0.22
CSNK1D-207ENST00000578194 FAM84AQ96KN4 292 aa13.65□□□□□ -0.22
CSNK1D-207ENST00000578194 CEP63Q96MT8 703 aa13.65□□□□□ -0.22
CSNK1D-207ENST00000578194 GDAP2Q9NXN4 497 aa13.65□□□□□ -0.22
CSNK1D-207ENST00000578194 DACH1Q9UI36 760 aa13.65□□□□□ -0.22
CSNK1D-207ENST00000578194 FBXW11Q9UKB1 542 aa13.65□□□□□ -0.22
CSNK1D-207ENST00000578194 TIMM13Q9Y5L4 95 aaPredicted RBP13.65□□□□□ -0.22
CSNK1D-207ENST00000578194 CDH23Q9H251 3354 aa13.65□□□□□ -0.22
CSNK1D-207ENST00000578194 TRIM49BA6NDI0 452 aa13.64□□□□□ -0.23
CSNK1D-207ENST00000578194 ADAM12O43184 909 aa13.64□□□□□ -0.23
CSNK1D-207ENST00000578194 TBC1D4O60343 1298 aa13.64□□□□□ -0.23
CSNK1D-207ENST00000578194 CLSTN1O94985 981 aa13.64□□□□□ -0.23
CSNK1D-207ENST00000578194 FGFR1OPO95684 399 aaKnown RBP13.64□□□□□ -0.23
CSNK1D-207ENST00000578194 SPATA31D3P0C874 917 aa13.64□□□□□ -0.23
CSNK1D-207ENST00000578194 ATICP31939 592 aa13.64□□□□□ -0.23
CSNK1D-207ENST00000578194 ELF1P32519 619 aa13.64□□□□□ -0.23
CSNK1D-207ENST00000578194 MTHFRP42898 656 aa13.64□□□□□ -0.23
CSNK1D-207ENST00000578194 PMS1P54277 932 aaKnown RBP13.64□□□□□ -0.23
CSNK1D-207ENST00000578194 ROR1Q01973 937 aa13.64□□□□□ -0.23
CSNK1D-207ENST00000578194 RARS2Q5T160 578 aaKnown RBP13.64□□□□□ -0.23
CSNK1D-207ENST00000578194 TPGS2Q68CL5 300 aa13.64□□□□□ -0.23
CSNK1D-207ENST00000578194 CYP26C1Q6V0L0 522 aa13.64□□□□□ -0.23
CSNK1D-207ENST00000578194 SPATA31D4Q6ZUB0 917 aa13.64□□□□□ -0.23
CSNK1D-207ENST00000578194 CCDC149Q6ZUS6 474 aa13.64□□□□□ -0.23
CSNK1D-207ENST00000578194 RTL10Q7L3V2 364 aa13.64□□□□□ -0.23
CSNK1D-207ENST00000578194 ZC3H3Q8IXZ2 948 aaKnown RBP13.64□□□□□ -0.23
CSNK1D-207ENST00000578194 TMEM86AQ8N2M4 240 aa13.64□□□□□ -0.23
CSNK1D-207ENST00000578194 TOP6BLQ8N6T0 577 aa13.64□□□□□ -0.23
CSNK1D-207ENST00000578194 CMASQ8NFW8 434 aaPredicted RBP13.64□□□□□ -0.23
CSNK1D-207ENST00000578194 ZNF461Q8TAF7 563 aa13.64□□□□□ -0.23
CSNK1D-207ENST00000578194 SPATA18Q8TC71 538 aa13.64□□□□□ -0.23
CSNK1D-207ENST00000578194 GPT2Q8TD30 523 aa13.64□□□□□ -0.23
CSNK1D-207ENST00000578194 ZNF516Q92618 1163 aa13.64□□□□□ -0.23
CSNK1D-207ENST00000578194 SYAP1Q96A49 352 aaPredicted RBP13.64□□□□□ -0.23
CSNK1D-207ENST00000578194 BORCS6Q96GS4 357 aa13.64□□□□□ -0.23
CSNK1D-207ENST00000578194 RIPOR3Q96MK2 946 aa13.64□□□□□ -0.23
CSNK1D-207ENST00000578194 APOL5Q9BWW9 433 aa13.64□□□□□ -0.23
CSNK1D-207ENST00000578194 GZF1Q9H116 711 aaPredicted RBP13.64□□□□□ -0.23
CSNK1D-207ENST00000578194 ADAM7Q9H2U9 754 aa13.64□□□□□ -0.23
CSNK1D-207ENST00000578194 ZDHHC7Q9NXF8 308 aa13.64□□□□□ -0.23
CSNK1D-207ENST00000578194 MAFFQ9ULX9 164 aa13.64□□□□□ -0.23
CSNK1D-207ENST00000578194 USP15Q9Y4E8 981 aaPredicted RBP13.64□□□□□ -0.23
CSNK1D-207ENST00000578194 SNX9Q9Y5X1 595 aa13.64□□□□□ -0.23
CSNK1D-207ENST00000578194 C2orf16Q68DN1 1984 aa13.63□□□□□ -0.23
CSNK1D-207ENST00000578194 ZMYND10O75800 440 aa13.63□□□□□ -0.23
CSNK1D-207ENST00000578194 STAU1O95793 577 aaKnown RBP13.63□□□□□ -0.23
CSNK1D-207ENST00000578194 C4BPAP04003 597 aaKnown RBP13.63□□□□□ -0.23
CSNK1D-207ENST00000578194 HNRNPA1P09651 372 aaKnown RBP eCLIP13.63□□□□□ -0.23
CSNK1D-207ENST00000578194 BMP1P13497 986 aa13.63□□□□□ -0.23
CSNK1D-207ENST00000578194 GTF2H1P32780 548 aa13.63□□□□□ -0.23
CSNK1D-207ENST00000578194 TNNC1P63316 161 aa13.63□□□□□ -0.23
CSNK1D-207ENST00000578194 DLG4P78352 724 aa13.63□□□□□ -0.23
CSNK1D-207ENST00000578194 SMAD2Q15796 467 aaKnown RBP13.63□□□□□ -0.23
CSNK1D-207ENST00000578194 UVSSAQ2YD98 709 aa13.63□□□□□ -0.23
CSNK1D-207ENST00000578194 ZACNQ401N2 412 aa13.63□□□□□ -0.23
CSNK1D-207ENST00000578194 PPM1LQ5SGD2 360 aa13.63□□□□□ -0.23
CSNK1D-207ENST00000578194 ATAT1Q5SQI0 421 aa13.63□□□□□ -0.23
CSNK1D-207ENST00000578194 WSCD1Q658N2 575 aa13.63□□□□□ -0.23
CSNK1D-207ENST00000578194 TTI2Q6NXR4 508 aa13.63□□□□□ -0.23
CSNK1D-207ENST00000578194 RSPO2Q6UXX9 243 aaPredicted RBP13.63□□□□□ -0.23
CSNK1D-207ENST00000578194 DPH6Q7L8W6 267 aa13.63□□□□□ -0.23
CSNK1D-207ENST00000578194 C12orf76Q8N812 135 aaPredicted RBP13.63□□□□□ -0.23
CSNK1D-207ENST00000578194 EEF2KMTQ96G04 330 aa13.63□□□□□ -0.23
CSNK1D-207ENST00000578194 NECTIN4Q96NY8 510 aa13.63□□□□□ -0.23
CSNK1D-207ENST00000578194 S1PR5Q9H228 398 aa13.63□□□□□ -0.23
CSNK1D-207ENST00000578194 METTL14Q9HCE5 456 aaKnown RBP13.63□□□□□ -0.23
CSNK1D-207ENST00000578194 PRKAG3Q9UGI9 489 aa13.63□□□□□ -0.23
CSNK1D-207ENST00000578194 ARMCX3Q9UH62 379 aaPredicted RBP13.63□□□□□ -0.23
CSNK1D-207ENST00000578194 RWDD2AQ9UIY3 292 aa13.63□□□□□ -0.23
CSNK1D-207ENST00000578194 L1RE1Q9UN81 338 aa13.63□□□□□ -0.23
CSNK1D-207ENST00000578194 PRRG1O14668 218 aa13.62□□□□□ -0.23
CSNK1D-207ENST00000578194 ABLIM3O94929 683 aa13.62□□□□□ -0.23
CSNK1D-207ENST00000578194 C8AP07357 584 aa13.62□□□□□ -0.23
CSNK1D-207ENST00000578194 TRIM49P0CI25 452 aa13.62□□□□□ -0.23
CSNK1D-207ENST00000578194 TRIM49CP0CI26 452 aa13.62□□□□□ -0.23
CSNK1D-207ENST00000578194 P4HA1P13674 534 aa13.62□□□□□ -0.23
CSNK1D-207ENST00000578194 IL9P15248 144 aa13.62□□□□□ -0.23
CSNK1D-207ENST00000578194 PTMSP20962 102 aa13.62□□□□□ -0.23
CSNK1D-207ENST00000578194 PIK3CAP42336 1068 aa13.62□□□□□ -0.23
CSNK1D-207ENST00000578194 STX17P56962 302 aa13.62□□□□□ -0.23
CSNK1D-207ENST00000578194 NLRP12P59046 1061 aa13.62□□□□□ -0.23
CSNK1D-207ENST00000578194 MYL6P60660 151 aa13.62□□□□□ -0.23
CSNK1D-207ENST00000578194 MYL7Q01449 175 aa13.62□□□□□ -0.23
CSNK1D-207ENST00000578194 NCOA4Q13772 614 aa13.62□□□□□ -0.23
CSNK1D-207ENST00000578194 ZNF699Q32M78 642 aa13.62□□□□□ -0.23
CSNK1D-207ENST00000578194 CCDC40Q4G0X9 1142 aa13.62□□□□□ -0.23
CSNK1D-207ENST00000578194 ZNF667Q5HYK9 610 aa13.62□□□□□ -0.23
CSNK1D-207ENST00000578194 TCERG1LQ5VWI1 586 aa13.62□□□□□ -0.23
CSNK1D-207ENST00000578194 TDRD10Q5VZ19 366 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms