RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 C12orf56Q8IXR9 622 aa13.83□□□□□ -0.2
CCDC57-211ENST00000578187 ELOA2Q8IYF1 753 aaPredicted RBP13.83□□□□□ -0.2
CCDC57-211ENST00000578187 GPD1LQ8N335 351 aa13.83□□□□□ -0.2
CCDC57-211ENST00000578187 SLC44A3Q8N4M1 653 aa13.83□□□□□ -0.2
CCDC57-211ENST00000578187 CCDC47Q96A33 483 aaKnown RBP13.83□□□□□ -0.2
CCDC57-211ENST00000578187 HSPBP1Q9NZL4 362 aa13.83□□□□□ -0.2
CCDC57-211ENST00000578187 CGNQ9P2M7 1197 aaKnown RBP13.83□□□□□ -0.2
CCDC57-211ENST00000578187 BACE2Q9Y5Z0 518 aa13.83□□□□□ -0.2
CCDC57-211ENST00000578187 CDY1Q9Y6F8 540 aa13.83□□□□□ -0.2
CCDC57-211ENST00000578187 H7C4K7 107 aa13.82□□□□□ -0.2
CCDC57-211ENST00000578187 CCL16O15467 120 aa13.82□□□□□ -0.2
CCDC57-211ENST00000578187 NARSO43776 548 aaKnown RBP13.82□□□□□ -0.2
CCDC57-211ENST00000578187 POU2F2P09086 479 aa13.82□□□□□ -0.2
CCDC57-211ENST00000578187 TKTP29401 623 aaKnown RBP13.82□□□□□ -0.2
CCDC57-211ENST00000578187 WNT7BP56706 349 aa13.82□□□□□ -0.2
CCDC57-211ENST00000578187 UBE2HP62256 183 aa13.82□□□□□ -0.2
CCDC57-211ENST00000578187 PNOCQ13519 176 aa13.82□□□□□ -0.2
CCDC57-211ENST00000578187 GSE1Q14687 1217 aa13.82□□□□□ -0.2
CCDC57-211ENST00000578187 TMEM132DQ14C87 1099 aa13.82□□□□□ -0.2
CCDC57-211ENST00000578187 CWF19L1Q69YN2 538 aaKnown RBP13.82□□□□□ -0.2
CCDC57-211ENST00000578187 HS2ST1Q7LGA3 356 aa13.82□□□□□ -0.2
CCDC57-211ENST00000578187 NT5DC4Q86YG4 428 aa13.82□□□□□ -0.2
CCDC57-211ENST00000578187 EFCAB13Q8IY85 973 aa13.82□□□□□ -0.2
CCDC57-211ENST00000578187 TMEM130Q8N3G9 435 aa13.82□□□□□ -0.2
CCDC57-211ENST00000578187 SPATA20Q8TB22 786 aa13.82□□□□□ -0.2
CCDC57-211ENST00000578187 RSAD2Q8WXG1 361 aa13.82□□□□□ -0.2
CCDC57-211ENST00000578187 FAM212AQ96EL1 285 aa13.82□□□□□ -0.2
CCDC57-211ENST00000578187 PHOX2BQ99453 314 aa13.82□□□□□ -0.2
CCDC57-211ENST00000578187 PCIF1Q9H4Z3 704 aa13.82□□□□□ -0.2
CCDC57-211ENST00000578187 RBAKQ9NYW8 714 aaPredicted RBP13.82□□□□□ -0.2
CCDC57-211ENST00000578187 CDH7Q9ULB5 785 aa13.82□□□□□ -0.2
CCDC57-211ENST00000578187 MYO10Q9HD67 2058 aa13.82□□□□□ -0.2
CCDC57-211ENST00000578187 GOLGA8IPA6NC78 632 aa13.81□□□□□ -0.2
CCDC57-211ENST00000578187 GOLGA8JA6NMD2 632 aa13.81□□□□□ -0.2
CCDC57-211ENST00000578187 PRRG1O14668 218 aa13.81□□□□□ -0.2
CCDC57-211ENST00000578187 SYN3O14994 580 aa13.81□□□□□ -0.2
CCDC57-211ENST00000578187 LRG1P02750 347 aa13.81□□□□□ -0.2
CCDC57-211ENST00000578187 AARSP49588 968 aaKnown RBP eCLIP13.81□□□□□ -0.2
CCDC57-211ENST00000578187 GUCY2FP51841 1108 aa13.81□□□□□ -0.2
CCDC57-211ENST00000578187 HTR4Q13639 388 aa13.81□□□□□ -0.2
CCDC57-211ENST00000578187 PABPC1LQ4VXU2 614 aaKnown RBP13.81□□□□□ -0.2
CCDC57-211ENST00000578187 BEST2Q8NFU1 509 aa13.81□□□□□ -0.2
CCDC57-211ENST00000578187 GOLGA5Q8TBA6 731 aa13.81□□□□□ -0.2
CCDC57-211ENST00000578187 TMEM174Q8WUU8 243 aa13.81□□□□□ -0.2
CCDC57-211ENST00000578187 SHDQ96IW2 340 aa13.81□□□□□ -0.2
CCDC57-211ENST00000578187 KCTD10Q9H3F6 313 aa13.81□□□□□ -0.2
CCDC57-211ENST00000578187 KIAA1586Q9HCI6 787 aa13.81□□□□□ -0.2
CCDC57-211ENST00000578187 CA14Q9ULX7 337 aa13.81□□□□□ -0.2
CCDC57-211ENST00000578187 NUMBLQ9Y6R0 609 aa13.81□□□□□ -0.2
CCDC57-211ENST00000578187 ANHXE9PGG2 379 aa13.8□□□□□ -0.2
CCDC57-211ENST00000578187 I3L4J1 428 aa13.8□□□□□ -0.2
CCDC57-211ENST00000578187 CLIC2O15247 247 aa13.8□□□□□ -0.2
CCDC57-211ENST00000578187 KINO60870 393 aaKnown RBP13.8□□□□□ -0.2
CCDC57-211ENST00000578187 MCM4P33991 863 aa13.8□□□□□ -0.2
CCDC57-211ENST00000578187 BRCC3P46736 316 aa13.8□□□□□ -0.2
CCDC57-211ENST00000578187 VARS2Q5ST30 1063 aaKnown RBP13.8□□□□□ -0.2
CCDC57-211ENST00000578187 CBWD2Q8IUF1 395 aa13.8□□□□□ -0.2
CCDC57-211ENST00000578187 CCDC105Q8IYK2 499 aa13.8□□□□□ -0.2
CCDC57-211ENST00000578187 ELMOD1Q8N336 334 aa13.8□□□□□ -0.2
CCDC57-211ENST00000578187 XXYLT1Q8NBI6 393 aa13.8□□□□□ -0.2
CCDC57-211ENST00000578187 APPL2Q8NEU8 664 aa13.8□□□□□ -0.2
CCDC57-211ENST00000578187 ZNF461Q8TAF7 563 aa13.8□□□□□ -0.2
CCDC57-211ENST00000578187 GPR152Q8TDT2 470 aa13.8□□□□□ -0.2
CCDC57-211ENST00000578187 FGF13Q92913 245 aa13.8□□□□□ -0.2
CCDC57-211ENST00000578187 SUSD3Q96L08 255 aa13.8□□□□□ -0.2
CCDC57-211ENST00000578187 GSDMAQ96QA5 445 aa13.8□□□□□ -0.2
CCDC57-211ENST00000578187 ARHGEF3Q9NR81 526 aa13.8□□□□□ -0.2
CCDC57-211ENST00000578187 SLC2A4RGQ9NR83 387 aa13.8□□□□□ -0.2
CCDC57-211ENST00000578187 RMND1Q9NWS8 449 aa13.8□□□□□ -0.2
CCDC57-211ENST00000578187 HOOK1Q9UJC3 728 aaKnown RBP13.8□□□□□ -0.2
CCDC57-211ENST00000578187 ANO9A1A5B4 782 aa13.79□□□□□ -0.2
CCDC57-211ENST00000578187 ZNF233A6NK53 670 aa13.79□□□□□ -0.2
CCDC57-211ENST00000578187 PROB1E7EW31 1015 aa13.79□□□□□ -0.2
CCDC57-211ENST00000578187 PIRO00625 290 aa13.79□□□□□ -0.2
CCDC57-211ENST00000578187 PDXKO00764 312 aa13.79□□□□□ -0.2
CCDC57-211ENST00000578187 ADAM12O43184 909 aa13.79□□□□□ -0.2
CCDC57-211ENST00000578187 KIF20AO95235 890 aa13.79□□□□□ -0.2
CCDC57-211ENST00000578187 SMC2O95347 1197 aa13.79□□□□□ -0.2
CCDC57-211ENST00000578187 NPR3P17342 541 aa13.79□□□□□ -0.2
CCDC57-211ENST00000578187 NBL1P41271 181 aa13.79□□□□□ -0.2
CCDC57-211ENST00000578187 CYP2J2P51589 502 aa13.79□□□□□ -0.2
CCDC57-211ENST00000578187 ARPP19P56211 112 aa13.79□□□□□ -0.2
CCDC57-211ENST00000578187 PFKPQ01813 784 aa13.79□□□□□ -0.2
CCDC57-211ENST00000578187 SNRNP35Q16560 246 aaKnown RBP13.79□□□□□ -0.2
CCDC57-211ENST00000578187 C9orf57Q5W0N0 161 aa13.79□□□□□ -0.2
CCDC57-211ENST00000578187 SLC8B1Q6J4K2 584 aa13.79□□□□□ -0.2
CCDC57-211ENST00000578187 ZNF280DQ6N043 979 aa13.79□□□□□ -0.2
CCDC57-211ENST00000578187 SLC9A9Q8IVB4 645 aa13.79□□□□□ -0.2
CCDC57-211ENST00000578187 GUF1Q8N442 669 aaKnown RBP13.79□□□□□ -0.2
CCDC57-211ENST00000578187 DTWD2Q8NBA8 298 aa13.79□□□□□ -0.2
CCDC57-211ENST00000578187 TBC1D17Q9HA65 648 aa13.79□□□□□ -0.2
CCDC57-211ENST00000578187 PDE11AQ9HCR9 933 aa13.79□□□□□ -0.2
CCDC57-211ENST00000578187 DMAC2Q9NW81 257 aa13.79□□□□□ -0.2
CCDC57-211ENST00000578187 TRAF3IP3Q9Y228 551 aa13.79□□□□□ -0.2
CCDC57-211ENST00000578187 MRPS23Q9Y3D9 190 aaKnown RBP13.79□□□□□ -0.2
CCDC57-211ENST00000578187 PCDHA5Q9Y5H7 936 aa13.79□□□□□ -0.2
CCDC57-211ENST00000578187 M0QZQ0 153 aa13.78□□□□□ -0.2
CCDC57-211ENST00000578187 PPEF2O14830 753 aa13.78□□□□□ -0.2
CCDC57-211ENST00000578187 PTPN2P17706 415 aa13.78□□□□□ -0.2
CCDC57-211ENST00000578187 PAX3P23760 479 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms