RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 COL23A1Q86Y22 540 aaPredicted RBP6.74□□□□□ -1.33
NUP88-213ENST00000576862 LDLRAD3Q86YD5 345 aa6.74□□□□□ -1.33
NUP88-213ENST00000576862 AOPEPQ8N6M6 819 aa6.74□□□□□ -1.33
NUP88-213ENST00000576862 UNKLQ9H9P5 680 aaKnown RBP6.74□□□□□ -1.33
NUP88-213ENST00000576862 GALNT9Q9HCQ5 603 aa6.74□□□□□ -1.33
NUP88-213ENST00000576862 MTO1Q9Y2Z2 717 aaKnown RBP6.74□□□□□ -1.33
NUP88-213ENST00000576862 PIPSLA2A3N6 862 aa6.73□□□□□ -1.33
NUP88-213ENST00000576862 GRID2IPA4D2P6 1211 aa6.73□□□□□ -1.33
NUP88-213ENST00000576862 ERN1O75460 977 aaKnown RBP6.73□□□□□ -1.33
NUP88-213ENST00000576862 FOSP01100 380 aaPredicted RBP6.73□□□□□ -1.33
NUP88-213ENST00000576862 RARBP10826 455 aa6.73□□□□□ -1.33
NUP88-213ENST00000576862 HDCP19113 662 aa6.73□□□□□ -1.33
NUP88-213ENST00000576862 AGFG1P52594 562 aaKnown RBP6.73□□□□□ -1.33
NUP88-213ENST00000576862 ZNF135P52742 658 aaPredicted RBP6.73□□□□□ -1.33
NUP88-213ENST00000576862 POU6F2P78424 691 aaPredicted RBP6.73□□□□□ -1.33
NUP88-213ENST00000576862 HABP2Q14520 560 aaPredicted RBP6.73□□□□□ -1.33
NUP88-213ENST00000576862 GEN1Q17RS7 908 aa6.73□□□□□ -1.33
NUP88-213ENST00000576862 TMPRSS9Q7Z410 1059 aa6.73□□□□□ -1.33
NUP88-213ENST00000576862 NT5C1BQ96P26 610 aa6.73□□□□□ -1.33
NUP88-213ENST00000576862 PCDHA6Q9UN73 950 aa6.73□□□□□ -1.33
NUP88-213ENST00000576862 MYADML2A6NDP7 307 aa6.72□□□□□ -1.33
NUP88-213ENST00000576862 A6NNZ2 444 aa6.72□□□□□ -1.33
NUP88-213ENST00000576862 SUN1O94901 812 aa6.72□□□□□ -1.33
NUP88-213ENST00000576862 KCNA2P16389 499 aa6.72□□□□□ -1.33
NUP88-213ENST00000576862 VAV2P52735 878 aa6.72□□□□□ -1.33
NUP88-213ENST00000576862 MXRA7P84157 204 aa6.72□□□□□ -1.33
NUP88-213ENST00000576862 MC2RQ01718 297 aa6.72□□□□□ -1.33
NUP88-213ENST00000576862 EXOSC9Q06265 439 aaKnown RBP6.72□□□□□ -1.33
NUP88-213ENST00000576862 ZNF844Q08AG5 666 aa6.72□□□□□ -1.33
NUP88-213ENST00000576862 EMC10Q5UCC4 262 aa6.72□□□□□ -1.33
NUP88-213ENST00000576862 FMNL3Q8IVF7 1028 aa6.72□□□□□ -1.33
NUP88-213ENST00000576862 BRIX1Q8TDN6 353 aaKnown RBP6.72□□□□□ -1.33
NUP88-213ENST00000576862 SORCS2Q96PQ0 1159 aa6.72□□□□□ -1.33
NUP88-213ENST00000576862 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.72□□□□□ -1.33
NUP88-213ENST00000576862 SYBUQ9NX95 663 aa6.72□□□□□ -1.33
NUP88-213ENST00000576862 ETAA1Q9NY74 926 aa6.72□□□□□ -1.33
NUP88-213ENST00000576862 STAP2Q9UGK3 403 aa6.72□□□□□ -1.33
NUP88-213ENST00000576862 SRRDQ9UH36 339 aa6.72□□□□□ -1.33
NUP88-213ENST00000576862 DDX20Q9UHI6 824 aaKnown RBP6.72□□□□□ -1.33
NUP88-213ENST00000576862 CCDC195A0A1B0GUA6 201 aa6.71□□□□□ -1.34
NUP88-213ENST00000576862 A0A1W2PS29 197 aa6.71□□□□□ -1.34
NUP88-213ENST00000576862 PARNO95453 639 aaKnown RBP6.71□□□□□ -1.34
NUP88-213ENST00000576862 TCF15Q12870 199 aa6.71□□□□□ -1.34
NUP88-213ENST00000576862 ABHD17BQ5VST6 288 aa6.71□□□□□ -1.34
NUP88-213ENST00000576862 TAPT1Q6NXT6 567 aa6.71□□□□□ -1.34
NUP88-213ENST00000576862 PCSK4Q6UW60 755 aa6.71□□□□□ -1.34
NUP88-213ENST00000576862 NPNTQ6UXI9 565 aa6.71□□□□□ -1.34
NUP88-213ENST00000576862 Q6YL49 198 aa6.71□□□□□ -1.34
NUP88-213ENST00000576862 C14orf80Q86SX3 495 aa6.71□□□□□ -1.34
NUP88-213ENST00000576862 DAAM2Q86T65 1068 aa6.71□□□□□ -1.34
NUP88-213ENST00000576862 MRGPRX1Q96LB2 322 aa6.71□□□□□ -1.34
NUP88-213ENST00000576862 PRRX2Q99811 253 aa6.71□□□□□ -1.34
NUP88-213ENST00000576862 B3GNT5Q9BYG0 378 aa6.71□□□□□ -1.34
NUP88-213ENST00000576862 TINAGL1Q9GZM7 467 aaPredicted RBP6.71□□□□□ -1.34
NUP88-213ENST00000576862 RSAD1Q9HA92 442 aa6.71□□□□□ -1.34
NUP88-213ENST00000576862 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.71□□□□□ -1.34
NUP88-213ENST00000576862 PRAMEF33A0A0G2JMD5 474 aa6.7□□□□□ -1.34
NUP88-213ENST00000576862 ERC2O15083 957 aa6.7□□□□□ -1.34
NUP88-213ENST00000576862 FOXN1O15353 648 aa6.7□□□□□ -1.34
NUP88-213ENST00000576862 PRAMEF10O60809 474 aa6.7□□□□□ -1.34
NUP88-213ENST00000576862 CHEK2O96017 543 aa6.7□□□□□ -1.34
NUP88-213ENST00000576862 ITGAMP11215 1152 aa6.7□□□□□ -1.34
NUP88-213ENST00000576862 TOB1P50616 345 aaPredicted RBP6.7□□□□□ -1.34
NUP88-213ENST00000576862 SOX8P57073 446 aa6.7□□□□□ -1.34
NUP88-213ENST00000576862 PIGFQ07326 219 aa6.7□□□□□ -1.34
NUP88-213ENST00000576862 FGL2Q14314 439 aa6.7□□□□□ -1.34
NUP88-213ENST00000576862 ANO6Q4KMQ2 910 aa6.7□□□□□ -1.34
NUP88-213ENST00000576862 KHDC1LQ5JSQ8 128 aa6.7□□□□□ -1.34
NUP88-213ENST00000576862 SP5Q6BEB4 398 aaPredicted RBP6.7□□□□□ -1.34
NUP88-213ENST00000576862 LAIR1Q6GTX8 287 aa6.7□□□□□ -1.34
NUP88-213ENST00000576862 SWSAP1Q6NVH7 229 aa6.7□□□□□ -1.34
NUP88-213ENST00000576862 PPP1R32Q7Z5V6 425 aa6.7□□□□□ -1.34
NUP88-213ENST00000576862 USP37Q86T82 979 aa6.7□□□□□ -1.34
NUP88-213ENST00000576862 BEND2Q8NDZ0 799 aa6.7□□□□□ -1.34
NUP88-213ENST00000576862 TTC8Q8TAM2 541 aa6.7□□□□□ -1.34
NUP88-213ENST00000576862 POC1BQ8TC44 478 aa6.7□□□□□ -1.34
NUP88-213ENST00000576862 MTFMTQ96DP5 389 aaKnown RBP6.7□□□□□ -1.34
NUP88-213ENST00000576862 TRIB1Q96RU8 372 aa6.7□□□□□ -1.34
NUP88-213ENST00000576862 TMEM60Q9H2L4 133 aa6.7□□□□□ -1.34
NUP88-213ENST00000576862 C1orf112Q9NSG2 853 aa6.7□□□□□ -1.34
NUP88-213ENST00000576862 POLRMTO00411 1230 aaKnown RBP6.69□□□□□ -1.34
NUP88-213ENST00000576862 DNAJB5O75953 348 aa6.69□□□□□ -1.34
NUP88-213ENST00000576862 KIF20AO95235 890 aa6.69□□□□□ -1.34
NUP88-213ENST00000576862 DPTQ07507 201 aa6.69□□□□□ -1.34
NUP88-213ENST00000576862 DYRK1AQ13627 763 aa6.69□□□□□ -1.34
NUP88-213ENST00000576862 CD300EQ496F6 205 aaPredicted RBP6.69□□□□□ -1.34
NUP88-213ENST00000576862 ARHGAP29Q52LW3 1261 aa6.69□□□□□ -1.34
NUP88-213ENST00000576862 CLNKQ7Z7G1 428 aa6.69□□□□□ -1.34
NUP88-213ENST00000576862 KIAA0319LQ8IZA0 1049 aa6.69□□□□□ -1.34
NUP88-213ENST00000576862 LINC00476Q8WZB0 136 aa6.69□□□□□ -1.34
NUP88-213ENST00000576862 SMOQ99835 787 aa6.69□□□□□ -1.34
NUP88-213ENST00000576862 ZMAT3Q9HA38 289 aaKnown RBP6.69□□□□□ -1.34
NUP88-213ENST00000576862 ATP6V0A4Q9HBG4 840 aa6.69□□□□□ -1.34
NUP88-213ENST00000576862 SARS2Q9NP81 518 aaKnown RBP6.69□□□□□ -1.34
NUP88-213ENST00000576862 CPA4Q9UI42 421 aa6.69□□□□□ -1.34
NUP88-213ENST00000576862 NEU2Q9Y3R4 380 aa6.69□□□□□ -1.34
NUP88-213ENST00000576862 TMEM191CA6NGB0 347 aa6.68□□□□□ -1.34
NUP88-213ENST00000576862 VSTM5A8MXK1 200 aa6.68□□□□□ -1.34
NUP88-213ENST00000576862 GNAI2P04899 355 aa6.68□□□□□ -1.34
NUP88-213ENST00000576862 FDXRP22570 491 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms