RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 VEGFAP15692 232 aaPredicted RBP13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 RRP1BQ14684 758 aaKnown RBP13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 PCNX4Q63HM2 1172 aa13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 TMPRSS6Q8IU80 811 aa13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 GLIS3Q8NEA6 775 aa13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 RMDN3Q96TC7 470 aa13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 PAFAH2Q99487 392 aa13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 CTNNAL1Q9UBT7 734 aa13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 GRID1Q9ULK0 1009 aa13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 LZTS1Q9Y250 596 aa13.76□□□□□ -0.21
PCDHGB3-201ENST00000576222 BTNL10A8MVZ5 291 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 NEMP1O14524 444 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 XPO1O14980 1071 aaKnown RBP13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 SEC24DO94855 1032 aaPredicted RBP13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 CLPTM1O96005 669 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 CYP11B1P15538 503 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 YWHABP31946 246 aaKnown RBP13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 SFNP31947 248 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 ATXN3P54252 364 aaPredicted RBP13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 KLC3Q6P597 504 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 FAM196AQ6ZSG2 479 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 LRRC6Q86X45 466 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 ZNF677Q86XU0 584 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 A8MXQ7 604 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 SH3BP5O60239 455 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 TAC1P20366 129 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 CRKP46108 304 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 R3HDM1Q15032 1099 aaKnown RBP13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 C16orf89Q6UX73 402 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 PPP1R36Q96LQ0 422 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 MED15Q96RN5 788 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 ZNF184Q99676 751 aaPredicted RBP13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 PI4K2AQ9BTU6 479 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 KRT82Q9NSB4 513 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 LRRC4BQ9NT99 713 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 BFARQ9NZS9 450 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 TAGLN3Q9UI15 199 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 SPATA31D1Q6ZQQ2 1576 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 PECAM1P16284 738 aaPredicted RBP13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 C2CD6Q53TS8 623 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 LRRC8EQ6NSJ5 796 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 KCNV1Q6PIU1 500 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 KCNK18Q7Z418 384 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 EXOC3L1Q86VI1 746 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 DDI1Q8WTU0 396 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 GABBR1Q9UBS5 961 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 PXDNQ92626 1479 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 TM9SF1O15321 606 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 ATP6V1C1P21283 382 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 TMEM119Q4V9L6 283 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 EAPPQ56P03 285 aaPredicted RBP13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 SLC27A3Q5K4L6 730 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 FBXO36Q8NEA4 188 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 SPATA18Q8TC71 538 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 KRT35Q92764 455 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 TMA16Q96EY4 203 aaKnown RBP13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 CNBD2Q96M20 576 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 MTRQ99707 1265 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 KIAA1683Q9H0B3 1180 aa13.75□□□□□ -0.21
PCDHGB3-201ENST00000576222 M0QYV0 167 aa13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 PIK3R2O00459 728 aa13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 ENTPD5O75356 428 aa13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 RPS6KA4O75676 772 aa13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 PDE5AO76074 875 aa13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 NTSR2O95665 410 aa13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 SESN2P58004 480 aaPredicted RBP13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 IGBP1P78318 339 aa13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 ZNF75CPQ92670 426 aaPredicted RBP13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 ATXN7L3BQ96GX2 97 aa13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 VPS39Q96JC1 886 aa13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 KLHL4Q9C0H6 718 aa13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 SNX5Q9Y5X3 404 aa13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 PIK3CDO00329 1044 aa13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 FCHO1O14526 889 aa13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 STRNO43815 780 aa13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 CAMTA2O94983 1202 aa13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 TMED10P49755 219 aaKnown RBP13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 MROH9Q5TGP6 573 aa13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 APTXQ7Z2E3 356 aaKnown RBP13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 PARD3BQ8TEW8 1205 aa13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 TIPINQ9BVW5 301 aa13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 DCLK3Q9C098 648 aa13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 ZNF212Q9UDV6 495 aa13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 STARD13Q9Y3M8 1113 aa13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 GSTA4O15217 222 aa13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 MSH4O15457 936 aa13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 BGNP21810 368 aa13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 RRM1P23921 792 aa13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 AQP5P55064 265 aa13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 PKN2Q16513 984 aaKnown RBP13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 SLC45A4Q5BKX6 768 aa13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 DNAJC18Q9H819 358 aa13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 CAAP1Q9H8G2 361 aa13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 AS3MTQ9HBK9 375 aa13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 ARHGAP26Q9UNA1 814 aa13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 PCDHA3Q9Y5H8 950 aa13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 DIP2AQ14689 1571 aa13.74□□□□□ -0.21
PCDHGB3-201ENST00000576222 APOL1O14791 398 aa13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 MGRN1O60291 552 aa13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 GSCP56915 257 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms