RNA–Protein interactions for RNA: ENST00000575194.5

SPNS3-204, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 1 (best)

Gene SPNS3, Length 1,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-204ENST00000575194 FAM114A2Q9NRY5 505 aa19.92■□□□□ 0.78
SPNS3-204ENST00000575194 ADAM22Q9P0K1 906 aa19.92■□□□□ 0.78
SPNS3-204ENST00000575194 RASAL2Q9UJF2 1139 aa19.92■□□□□ 0.78
SPNS3-204ENST00000575194 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.92■□□□□ 0.78
SPNS3-204ENST00000575194 Q9Y3F1 56 aa19.92■□□□□ 0.78
SPNS3-204ENST00000575194 ESYT3A0FGR9 886 aa19.91■□□□□ 0.78
SPNS3-204ENST00000575194 FAM187AA6NFU0 413 aa19.91■□□□□ 0.78
SPNS3-204ENST00000575194 SEPT4O43236 478 aa19.91■□□□□ 0.78
SPNS3-204ENST00000575194 CXCL8P10145 99 aa19.91■□□□□ 0.78
SPNS3-204ENST00000575194 CDC42EP1Q00587 391 aa19.91■□□□□ 0.78
SPNS3-204ENST00000575194 AMHR2Q16671 573 aa19.91■□□□□ 0.78
SPNS3-204ENST00000575194 ZBTB10Q96DT7 871 aa19.91■□□□□ 0.78
SPNS3-204ENST00000575194 ASB7Q9H672 318 aa19.91■□□□□ 0.78
SPNS3-204ENST00000575194 CISHQ9NSE2 258 aa19.91■□□□□ 0.78
SPNS3-204ENST00000575194 CHORDC1Q9UHD1 332 aaPredicted RBP19.91■□□□□ 0.78
SPNS3-204ENST00000575194 ZSCAN5CA6NGD5 496 aaPredicted RBP19.9■□□□□ 0.78
SPNS3-204ENST00000575194 MYO1FO00160 1098 aa19.9■□□□□ 0.78
SPNS3-204ENST00000575194 OPA1O60313 960 aa19.9■□□□□ 0.78
SPNS3-204ENST00000575194 PHF2O75151 1096 aa19.9■□□□□ 0.78
SPNS3-204ENST00000575194 ERLIN2O94905 339 aa19.9■□□□□ 0.78
SPNS3-204ENST00000575194 CALB1P05937 261 aa19.9■□□□□ 0.78
SPNS3-204ENST00000575194 STAG3L1P0CL83 205 aa19.9■□□□□ 0.78
SPNS3-204ENST00000575194 RRM1P23921 792 aa19.9■□□□□ 0.78
SPNS3-204ENST00000575194 CCND3P30281 292 aaPredicted RBP19.9■□□□□ 0.78
SPNS3-204ENST00000575194 CHRNA3P32297 505 aa19.9■□□□□ 0.78
SPNS3-204ENST00000575194 OSTNP61366 133 aa19.9■□□□□ 0.78
SPNS3-204ENST00000575194 HLTFQ14527 1009 aaKnown RBP eCLIP19.9■□□□□ 0.78
SPNS3-204ENST00000575194 BTBD6Q96KE9 485 aa19.9■□□□□ 0.78
SPNS3-204ENST00000575194 ADPGKQ9BRR6 497 aa19.9■□□□□ 0.78
SPNS3-204ENST00000575194 ZNF518BQ9C0D4 1074 aa19.9■□□□□ 0.78
SPNS3-204ENST00000575194 VPS18Q9P253 973 aa19.9■□□□□ 0.78
SPNS3-204ENST00000575194 AMACRQ9UHK6 382 aa19.9■□□□□ 0.78
SPNS3-204ENST00000575194 CEP83Q9Y592 693 aa19.9■□□□□ 0.78
SPNS3-204ENST00000575194 MROH7Q68CQ1 1323 aa19.9■□□□□ 0.78
SPNS3-204ENST00000575194 DYNC1LI2O43237 492 aaPredicted RBP19.9■□□□□ 0.78
SPNS3-204ENST00000575194 DUSP11O75319 330 aaKnown RBP19.9■□□□□ 0.78
SPNS3-204ENST00000575194 VTNP04004 478 aa19.9■□□□□ 0.78
SPNS3-204ENST00000575194 INHAP05111 366 aa19.9■□□□□ 0.78
SPNS3-204ENST00000575194 IQCF3P0C7M6 154 aa19.9■□□□□ 0.78
SPNS3-204ENST00000575194 MARCKSL1P49006 195 aa19.9■□□□□ 0.78
SPNS3-204ENST00000575194 DR1Q01658 176 aa19.9■□□□□ 0.78
SPNS3-204ENST00000575194 DMTNQ08495 405 aa19.9■□□□□ 0.78
SPNS3-204ENST00000575194 PASD1Q8IV76 773 aa19.9■□□□□ 0.78
SPNS3-204ENST00000575194 MAIP1Q8WWC4 291 aa19.9■□□□□ 0.78
SPNS3-204ENST00000575194 ZNF606Q8WXB4 792 aa19.9■□□□□ 0.78
SPNS3-204ENST00000575194 SEC14L1Q92503 715 aa19.9■□□□□ 0.78
SPNS3-204ENST00000575194 LENG1Q96BZ8 264 aaPredicted RBP19.9■□□□□ 0.78
SPNS3-204ENST00000575194 XYLT2Q9H1B5 865 aa19.9■□□□□ 0.78
SPNS3-204ENST00000575194 A6NJR5 290 aa19.89■□□□□ 0.77
SPNS3-204ENST00000575194 PROSCO94903 275 aa19.89■□□□□ 0.77
SPNS3-204ENST00000575194 P4HA1P13674 534 aa19.89■□□□□ 0.77
SPNS3-204ENST00000575194 ATICP31939 592 aa19.89■□□□□ 0.77
SPNS3-204ENST00000575194 ASPAP45381 313 aa19.89■□□□□ 0.77
SPNS3-204ENST00000575194 ZNF667Q5HYK9 610 aa19.89■□□□□ 0.77
SPNS3-204ENST00000575194 CTU1Q7Z7A3 348 aaKnown RBP19.89■□□□□ 0.77
SPNS3-204ENST00000575194 TLK2Q86UE8 772 aa19.89■□□□□ 0.77
SPNS3-204ENST00000575194 NT5DC4Q86YG4 428 aa19.89■□□□□ 0.77
SPNS3-204ENST00000575194 CEP120Q8N960 986 aa19.89■□□□□ 0.77
SPNS3-204ENST00000575194 TMEM35BQ8NCS4 154 aa19.89■□□□□ 0.77
SPNS3-204ENST00000575194 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.89■□□□□ 0.77
SPNS3-204ENST00000575194 C11orf70Q9BRQ4 267 aa19.89■□□□□ 0.77
SPNS3-204ENST00000575194 PARVAQ9NVD7 372 aa19.89■□□□□ 0.77
SPNS3-204ENST00000575194 PCDHGC3Q9UN70 934 aa19.89■□□□□ 0.77
SPNS3-204ENST00000575194 LACTBL1A8MY62 500 aa19.88■□□□□ 0.77
SPNS3-204ENST00000575194 TTI1O43156 1089 aa19.88■□□□□ 0.77
SPNS3-204ENST00000575194 MED7O43513 233 aa19.88■□□□□ 0.77
SPNS3-204ENST00000575194 CD58P19256 250 aa19.88■□□□□ 0.77
SPNS3-204ENST00000575194 GBP1P32455 592 aa19.88■□□□□ 0.77
SPNS3-204ENST00000575194 MAN1A1P33908 653 aa19.88■□□□□ 0.77
SPNS3-204ENST00000575194 GGCXP38435 758 aa19.88■□□□□ 0.77
SPNS3-204ENST00000575194 DCAF4L1Q3SXM0 396 aa19.88■□□□□ 0.77
SPNS3-204ENST00000575194 PLEKHA7Q6IQ23 1121 aa19.88■□□□□ 0.77
SPNS3-204ENST00000575194 SLC13A5Q86YT5 568 aaPredicted RBP19.88■□□□□ 0.77
SPNS3-204ENST00000575194 EXOC4Q96A65 974 aa19.88■□□□□ 0.77
SPNS3-204ENST00000575194 LRRC45Q96CN5 670 aa19.88■□□□□ 0.77
SPNS3-204ENST00000575194 FAN1Q9Y2M0 1017 aa19.88■□□□□ 0.77
SPNS3-204ENST00000575194 KAT6AQ92794 2004 aa19.88■□□□□ 0.77
SPNS3-204ENST00000575194 RALGAPA2Q2PPJ7 1873 aa19.88■□□□□ 0.77
SPNS3-204ENST00000575194 TSPAN1O60635 241 aa19.88■□□□□ 0.77
SPNS3-204ENST00000575194 RNF40O75150 1001 aa19.88■□□□□ 0.77
SPNS3-204ENST00000575194 KRT19P08727 400 aa19.88■□□□□ 0.77
SPNS3-204ENST00000575194 ARF4P18085 180 aaPredicted RBP19.88■□□□□ 0.77
SPNS3-204ENST00000575194 PTP4A2Q12974 167 aa19.88■□□□□ 0.77
SPNS3-204ENST00000575194 MMS22LQ6ZRQ5 1243 aa19.88■□□□□ 0.77
SPNS3-204ENST00000575194 CDR2LQ86X02 465 aaPredicted RBP19.88■□□□□ 0.77
SPNS3-204ENST00000575194 CD302Q8IX05 232 aa19.88■□□□□ 0.77
SPNS3-204ENST00000575194 SH3TC2Q8TF17 1288 aa19.88■□□□□ 0.77
SPNS3-204ENST00000575194 BCO2Q9BYV7 579 aa19.88■□□□□ 0.77
SPNS3-204ENST00000575194 PLEKHA4Q9H4M7 779 aa19.88■□□□□ 0.77
SPNS3-204ENST00000575194 FAM124BQ9H5Z6 455 aaPredicted RBP19.88■□□□□ 0.77
SPNS3-204ENST00000575194 DNAH12Q6ZR08 3092 aa19.87■□□□□ 0.77
SPNS3-204ENST00000575194 GOLGA8KD6RF30 607 aa19.87■□□□□ 0.77
SPNS3-204ENST00000575194 PSTPIP1O43586 416 aa19.87■□□□□ 0.77
SPNS3-204ENST00000575194 SYF2O95926 243 aaKnown RBP19.87■□□□□ 0.77
SPNS3-204ENST00000575194 NFICP08651 508 aa19.87■□□□□ 0.77
SPNS3-204ENST00000575194 PYGMP11217 842 aa19.87■□□□□ 0.77
SPNS3-204ENST00000575194 MMP8P22894 467 aa19.87■□□□□ 0.77
SPNS3-204ENST00000575194 HSPA9P38646 679 aaKnown RBP19.87■□□□□ 0.77
SPNS3-204ENST00000575194 NKX3-2P78367 333 aa19.87■□□□□ 0.77
SPNS3-204ENST00000575194 TAP1Q03518 808 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms