RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 HSPBP1Q9NZL4 362 aa21.92■■□□□ 1.1
CLK3-225ENST00000569063 DOCK8Q8NF50 2099 aa21.91■■□□□ 1.1
CLK3-225ENST00000569063 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.91■■□□□ 1.1
CLK3-225ENST00000569063 ZNF233A6NK53 670 aa21.91■■□□□ 1.1
CLK3-225ENST00000569063 KPNA7A9QM74 516 aa21.91■■□□□ 1.1
CLK3-225ENST00000569063 CYB561D2O14569 222 aa21.91■■□□□ 1.1
CLK3-225ENST00000569063 VNN2O95498 520 aa21.91■■□□□ 1.1
CLK3-225ENST00000569063 RHOP08100 348 aa21.91■■□□□ 1.1
CLK3-225ENST00000569063 OR4Q2P0C623 313 aa21.91■■□□□ 1.1
CLK3-225ENST00000569063 HTR4Q13639 388 aa21.91■■□□□ 1.1
CLK3-225ENST00000569063 BMT2Q1RMZ1 405 aa21.91■■□□□ 1.1
CLK3-225ENST00000569063 SV2CQ496J9 727 aa21.91■■□□□ 1.1
CLK3-225ENST00000569063 C1orf127Q8N9H9 656 aa21.91■■□□□ 1.1
CLK3-225ENST00000569063 ZNF560Q96MR9 790 aa21.91■■□□□ 1.1
CLK3-225ENST00000569063 SLC39A2Q9NP94 309 aa21.91■■□□□ 1.1
CLK3-225ENST00000569063 AGPAT3Q9NRZ7 376 aa21.91■■□□□ 1.1
CLK3-225ENST00000569063 KLRC4O43908 158 aa21.9■■□□□ 1.1
CLK3-225ENST00000569063 MYL1P05976 194 aa21.9■■□□□ 1.1
CLK3-225ENST00000569063 SURF1Q15526 300 aa21.9■■□□□ 1.1
CLK3-225ENST00000569063 METTL23Q86XA0 190 aa21.9■■□□□ 1.1
CLK3-225ENST00000569063 CBWD2Q8IUF1 395 aa21.9■■□□□ 1.1
CLK3-225ENST00000569063 CXorf38Q8TB03 319 aa21.9■■□□□ 1.1
CLK3-225ENST00000569063 NOC3LQ8WTT2 800 aaKnown RBP21.9■■□□□ 1.1
CLK3-225ENST00000569063 ITGA11Q9UKX5 1188 aa21.9■■□□□ 1.1
CLK3-225ENST00000569063 DOCK6Q96HP0 2047 aa21.9■■□□□ 1.1
CLK3-225ENST00000569063 NOTCH4Q99466 2003 aa21.9■■□□□ 1.1
CLK3-225ENST00000569063 SCN1AP35498 2009 aa21.89■■□□□ 1.1
CLK3-225ENST00000569063 A0A1W2PQ27 194 aa21.89■■□□□ 1.09
CLK3-225ENST00000569063 A0A1W2PQ64 194 aa21.89■■□□□ 1.09
CLK3-225ENST00000569063 A0A1W2PQD8 194 aa21.89■■□□□ 1.09
CLK3-225ENST00000569063 TULP1O00294 542 aaPredicted RBP21.89■■□□□ 1.09
CLK3-225ENST00000569063 PDGFBP01127 241 aaPredicted RBP21.89■■□□□ 1.09
CLK3-225ENST00000569063 ITGB3P05106 788 aa21.89■■□□□ 1.09
CLK3-225ENST00000569063 POLR2BP30876 1174 aaKnown RBP21.89■■□□□ 1.09
CLK3-225ENST00000569063 TWF1Q12792 350 aa21.89■■□□□ 1.09
CLK3-225ENST00000569063 PSMD2Q13200 908 aa21.89■■□□□ 1.09
CLK3-225ENST00000569063 SLC5A9Q2M3M2 681 aa21.89■■□□□ 1.09
CLK3-225ENST00000569063 NELFCDQ8IXH7 590 aa21.89■■□□□ 1.09
CLK3-225ENST00000569063 ELMOD1Q8N336 334 aa21.89■■□□□ 1.09
CLK3-225ENST00000569063 CSGALNACT2Q8N6G5 542 aa21.89■■□□□ 1.09
CLK3-225ENST00000569063 LRRC52Q8N7C0 313 aa21.89■■□□□ 1.09
CLK3-225ENST00000569063 PGLYRP2Q96PD5 576 aa21.89■■□□□ 1.09
CLK3-225ENST00000569063 CGNQ9P2M7 1197 aaKnown RBP21.89■■□□□ 1.09
CLK3-225ENST00000569063 AGAP1Q9UPQ3 857 aa21.89■■□□□ 1.09
CLK3-225ENST00000569063 MRPS23Q9Y3D9 190 aaKnown RBP21.89■■□□□ 1.09
CLK3-225ENST00000569063 NUMBLQ9Y6R0 609 aa21.89■■□□□ 1.09
CLK3-225ENST00000569063 NARSO43776 548 aaKnown RBP21.88■■□□□ 1.09
CLK3-225ENST00000569063 MICAL2O94851 1124 aa21.88■■□□□ 1.09
CLK3-225ENST00000569063 SRFP11831 508 aa21.88■■□□□ 1.09
CLK3-225ENST00000569063 SYKP43405 635 aa21.88■■□□□ 1.09
CLK3-225ENST00000569063 NDUFA8P51970 172 aa21.88■■□□□ 1.09
CLK3-225ENST00000569063 KNOP1Q1ED39 458 aaKnown RBP21.88■■□□□ 1.09
CLK3-225ENST00000569063 PRSS36Q5K4E3 855 aa21.88■■□□□ 1.09
CLK3-225ENST00000569063 WSCD1Q658N2 575 aa21.88■■□□□ 1.09
CLK3-225ENST00000569063 CENPPQ6IPU0 288 aa21.88■■□□□ 1.09
CLK3-225ENST00000569063 MTSS1LQ765P7 747 aa21.88■■□□□ 1.09
CLK3-225ENST00000569063 HS2ST1Q7LGA3 356 aa21.88■■□□□ 1.09
CLK3-225ENST00000569063 NPAS3Q8IXF0 933 aa21.88■■□□□ 1.09
CLK3-225ENST00000569063 C12orf56Q8IXR9 622 aa21.88■■□□□ 1.09
CLK3-225ENST00000569063 THEM5Q8N1Q8 247 aa21.88■■□□□ 1.09
CLK3-225ENST00000569063 OR10T2Q8NGX3 314 aa21.88■■□□□ 1.09
CLK3-225ENST00000569063 ZNF512Q96ME7 567 aaPredicted RBP21.88■■□□□ 1.09
CLK3-225ENST00000569063 TMEM209Q96SK2 561 aa21.88■■□□□ 1.09
CLK3-225ENST00000569063 RTP3Q9BQQ7 232 aa21.88■■□□□ 1.09
CLK3-225ENST00000569063 CORO1BQ9BR76 489 aa21.88■■□□□ 1.09
CLK3-225ENST00000569063 MTMR12Q9C0I1 747 aa21.88■■□□□ 1.09
CLK3-225ENST00000569063 ZCWPW1Q9H0M4 648 aa21.88■■□□□ 1.09
CLK3-225ENST00000569063 CRISPLD1Q9H336 500 aa21.88■■□□□ 1.09
CLK3-225ENST00000569063 INTS13Q9NVM9 706 aa21.88■■□□□ 1.09
CLK3-225ENST00000569063 GDE1Q9NZC3 331 aa21.88■■□□□ 1.09
CLK3-225ENST00000569063 CEP72Q9P209 647 aa21.88■■□□□ 1.09
CLK3-225ENST00000569063 HSFX1Q9UBD0 423 aa21.88■■□□□ 1.09
CLK3-225ENST00000569063 SIX4Q9UIU6 781 aa21.88■■□□□ 1.09
CLK3-225ENST00000569063 TSC2P49815 1807 aa21.87■■□□□ 1.09
CLK3-225ENST00000569063 MTMR11A4FU01 709 aa21.87■■□□□ 1.09
CLK3-225ENST00000569063 ZNF197O14709 1029 aa21.87■■□□□ 1.09
CLK3-225ENST00000569063 PLA2G5P39877 138 aa21.87■■□□□ 1.09
CLK3-225ENST00000569063 RBP5P82980 135 aa21.87■■□□□ 1.09
CLK3-225ENST00000569063 DUSP4Q13115 394 aa21.87■■□□□ 1.09
CLK3-225ENST00000569063 SNRNP35Q16560 246 aaKnown RBP21.87■■□□□ 1.09
CLK3-225ENST00000569063 KMT5BQ4FZB7 885 aa21.87■■□□□ 1.09
CLK3-225ENST00000569063 SCARA3Q6AZY7 606 aa21.87■■□□□ 1.09
CLK3-225ENST00000569063 IQCEQ6IPM2 695 aa21.87■■□□□ 1.09
CLK3-225ENST00000569063 PARM1Q6UWI2 310 aa21.87■■□□□ 1.09
CLK3-225ENST00000569063 FGF14Q92915 247 aa21.87■■□□□ 1.09
CLK3-225ENST00000569063 ANKRD36BP1Q96IX9 119 aa21.87■■□□□ 1.09
CLK3-225ENST00000569063 EXOC1Q9NV70 894 aa21.87■■□□□ 1.09
CLK3-225ENST00000569063 WNT16Q9UBV4 365 aa21.87■■□□□ 1.09
CLK3-225ENST00000569063 YIPF1Q9Y548 306 aa21.87■■□□□ 1.09
CLK3-225ENST00000569063 CLIC2O15247 247 aa21.86■■□□□ 1.09
CLK3-225ENST00000569063 TMEM191BP0C7N4 346 aa21.86■■□□□ 1.09
CLK3-225ENST00000569063 AVPR2P30518 371 aa21.86■■□□□ 1.09
CLK3-225ENST00000569063 EPHA5P54756 1037 aa21.86■■□□□ 1.09
CLK3-225ENST00000569063 STK4Q13043 487 aa21.86■■□□□ 1.09
CLK3-225ENST00000569063 PLD1Q13393 1074 aa21.86■■□□□ 1.09
CLK3-225ENST00000569063 DUOXA2Q1HG44 320 aa21.86■■□□□ 1.09
CLK3-225ENST00000569063 CYP4A22Q5TCH4 519 aa21.86■■□□□ 1.09
CLK3-225ENST00000569063 WDR49Q8IV35 697 aa21.86■■□□□ 1.09
CLK3-225ENST00000569063 XXYLT1Q8NBI6 393 aa21.86■■□□□ 1.09
CLK3-225ENST00000569063 ATAD1Q8NBU5 361 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms