RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 PRSS23O95084 383 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 PARP1P09874 1014 aaKnown RBP5.72□□□□□ -1.49
LINC00560-201ENST00000564593 CKBP12277 381 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 BTKQ06187 659 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 CTBP1Q13363 440 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 SLC44A4Q53GD3 710 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 NOMO2Q5JPE7 1267 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 FAM209BQ5JX69 171 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 LMBRD2Q68DH5 695 aaPredicted RBP5.72□□□□□ -1.49
LINC00560-201ENST00000564593 SYT12Q8IV01 421 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 SMC5Q8IY18 1101 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 VPS37AQ8NEZ2 397 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 NUP133Q8WUM0 1156 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 TINAGL1Q9GZM7 467 aaPredicted RBP5.72□□□□□ -1.49
LINC00560-201ENST00000564593 REXO4Q9GZR2 422 aaKnown RBP5.72□□□□□ -1.49
LINC00560-201ENST00000564593 SIK2Q9H0K1 926 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 AGAP1Q9UPQ3 857 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 PLEKHM1Q9Y4G2 1056 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 TRIM43BA6NCK2 446 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 M0QYG6 137 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 MYO1CO00159 1063 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 NCK2O43639 380 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 DNAJB5O75953 348 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 CHEK2O96017 543 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 GRPP07492 148 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 ACO1P21399 889 aaKnown RBP5.72□□□□□ -1.49
LINC00560-201ENST00000564593 RABGGTBP53611 331 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 RPS16P62249 146 aaKnown RBP5.72□□□□□ -1.49
LINC00560-201ENST00000564593 NHLH2Q02577 135 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 RAB32Q13637 225 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 AMOTQ4VCS5 1084 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 C1QL3Q5VWW1 255 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 Q6ZSN1 163 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 ZFPM1Q8IX07 1006 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 MPP5Q8N3R9 675 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 ZNF808Q8N4W9 903 aaPredicted RBP5.72□□□□□ -1.49
LINC00560-201ENST00000564593 SLC15A4Q8N697 577 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 ENAHQ8N8S7 591 aaPredicted RBP5.72□□□□□ -1.49
LINC00560-201ENST00000564593 PDPRQ8NCN5 879 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 Q8TCH9 128 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 MAML1Q92585 1016 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 TRIM43Q96BQ3 446 aaPredicted RBP5.72□□□□□ -1.49
LINC00560-201ENST00000564593 FAM89AQ96GI7 184 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 MARS2Q96GW9 593 aaKnown RBP5.72□□□□□ -1.49
LINC00560-201ENST00000564593 MNTQ99583 582 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 GPR87Q9BY21 358 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 ZNF518BQ9C0D4 1074 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 CERS4Q9HA82 394 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 PADI4Q9UM07 663 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 TMX2Q9Y320 296 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 LOC102724159A0A0B4J2E5 919 aa5.71□□□□□ -1.5
LINC00560-201ENST00000564593 ABHD14A-ACY1A0A1B0GW23 586 aa5.71□□□□□ -1.5
LINC00560-201ENST00000564593 GOLGA6L6A8MZA4 724 aa5.71□□□□□ -1.5
LINC00560-201ENST00000564593 LEFTY2O00292 366 aa5.71□□□□□ -1.5
LINC00560-201ENST00000564593 CYP27B1O15528 508 aa5.71□□□□□ -1.5
LINC00560-201ENST00000564593 ZNF623O75123 536 aa5.71□□□□□ -1.5
LINC00560-201ENST00000564593 TSHRP16473 764 aa5.71□□□□□ -1.5
LINC00560-201ENST00000564593 GCSHP23434 173 aa5.71□□□□□ -1.5
LINC00560-201ENST00000564593 HIBADHP31937 336 aaKnown RBP5.71□□□□□ -1.5
LINC00560-201ENST00000564593 UCP3P55916 312 aa5.71□□□□□ -1.5
LINC00560-201ENST00000564593 POU6F2P78424 691 aaPredicted RBP5.71□□□□□ -1.5
LINC00560-201ENST00000564593 PWP2Q15269 919 aaKnown RBP5.71□□□□□ -1.5
LINC00560-201ENST00000564593 IZUMO3Q5VZ72 239 aa5.71□□□□□ -1.5
LINC00560-201ENST00000564593 TSHZ3Q63HK5 1081 aa5.71□□□□□ -1.5
LINC00560-201ENST00000564593 MAMDC4Q6UXC1 1216 aa5.71□□□□□ -1.5
LINC00560-201ENST00000564593 PRRT2Q7Z6L0 340 aaPredicted RBP5.71□□□□□ -1.5
LINC00560-201ENST00000564593 DNAJC5GQ8N7S2 189 aa5.71□□□□□ -1.5
LINC00560-201ENST00000564593 BRIP1Q9BX63 1249 aa5.71□□□□□ -1.5
LINC00560-201ENST00000564593 TLR10Q9BXR5 811 aa5.71□□□□□ -1.5
LINC00560-201ENST00000564593 ARFGAP3Q9NP61 516 aa5.71□□□□□ -1.5
LINC00560-201ENST00000564593 E9PLN8 166 aa5.7□□□□□ -1.5
LINC00560-201ENST00000564593 IFRD1O00458 451 aaPredicted RBP5.7□□□□□ -1.5
LINC00560-201ENST00000564593 APOL1O14791 398 aa5.7□□□□□ -1.5
LINC00560-201ENST00000564593 KIF20AO95235 890 aa5.7□□□□□ -1.5
LINC00560-201ENST00000564593 PIM1P11309 404 aaPredicted RBP5.7□□□□□ -1.5
LINC00560-201ENST00000564593 FCER1AP12319 257 aa5.7□□□□□ -1.5
LINC00560-201ENST00000564593 APOBEC3AP31941 199 aaPredicted RBP5.7□□□□□ -1.5
LINC00560-201ENST00000564593 SLC11A2P49281 568 aa5.7□□□□□ -1.5
LINC00560-201ENST00000564593 PTTG1IPP53801 180 aa5.7□□□□□ -1.5
LINC00560-201ENST00000564593 SLFN5Q08AF3 891 aa5.7□□□□□ -1.5
LINC00560-201ENST00000564593 CHAF1AQ13111 956 aaPredicted RBP5.7□□□□□ -1.5
LINC00560-201ENST00000564593 STK3Q13188 491 aa5.7□□□□□ -1.5
LINC00560-201ENST00000564593 HS1BP3Q53T59 392 aa5.7□□□□□ -1.5
LINC00560-201ENST00000564593 FAM102AQ5T9C2 384 aaPredicted RBP5.7□□□□□ -1.5
LINC00560-201ENST00000564593 KLHDC7AQ5VTJ3 777 aa5.7□□□□□ -1.5
LINC00560-201ENST00000564593 FAM160B1Q5W0V3 765 aa5.7□□□□□ -1.5
LINC00560-201ENST00000564593 NAIF1Q69YI7 327 aaPredicted RBP5.7□□□□□ -1.5
LINC00560-201ENST00000564593 Q6ZRM9 215 aa5.7□□□□□ -1.5
LINC00560-201ENST00000564593 MICU3Q86XE3 530 aa5.7□□□□□ -1.5
LINC00560-201ENST00000564593 RHOT2Q8IXI1 618 aa5.7□□□□□ -1.5
LINC00560-201ENST00000564593 FAM46DQ8NEK8 389 aa5.7□□□□□ -1.5
LINC00560-201ENST00000564593 DNERQ8NFT8 737 aa5.7□□□□□ -1.5
LINC00560-201ENST00000564593 KIAA1191Q96A73 305 aa5.7□□□□□ -1.5
LINC00560-201ENST00000564593 ZC3H10Q96K80 434 aaKnown RBP5.7□□□□□ -1.5
LINC00560-201ENST00000564593 RBM15Q96T37 977 aaKnown RBP eCLIP5.7□□□□□ -1.5
LINC00560-201ENST00000564593 VKORC1Q9BQB6 163 aa5.7□□□□□ -1.5
LINC00560-201ENST00000564593 CNPPD1Q9BV87 410 aa5.7□□□□□ -1.5
LINC00560-201ENST00000564593 VPS11Q9H270 941 aa5.7□□□□□ -1.5
LINC00560-201ENST00000564593 CDYLQ9Y232 598 aa5.7□□□□□ -1.5
LINC00560-201ENST00000564593 PAXBP1Q9Y5B6 917 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms