RNA–Protein interactions for RNA: ENST00000559485.2

RGPD1-204, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-204ENST00000559485 GIPC3Q8TF64 312 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 NCSTNQ92542 709 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 MTERF3Q96E29 417 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 CDHR1Q96JP9 859 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 CLIC6Q96NY7 704 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 BBS4Q96RK4 519 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 CDRT15Q96T59 188 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 TSEN34Q9BSV6 310 aaKnown RBP2.5□□□□□ -2.01
RGPD1-204ENST00000559485 CINPQ9BW66 212 aaPredicted RBP2.5□□□□□ -2.01
RGPD1-204ENST00000559485 IL25Q9H293 177 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 NOL6Q9H6R4 1146 aaKnown RBP2.5□□□□□ -2.01
RGPD1-204ENST00000559485 CAB39LQ9H9S4 337 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 ATP8A2Q9NTI2 1148 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 MRPL39Q9NYK5 338 aaKnown RBP2.5□□□□□ -2.01
RGPD1-204ENST00000559485 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP2.5□□□□□ -2.01
RGPD1-204ENST00000559485 TCEAL9Q9UHQ7 104 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 TRMT6Q9UJA5 497 aaKnown RBP2.5□□□□□ -2.01
RGPD1-204ENST00000559485 ZNF229Q9UJW7 825 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 NUP50Q9UKX7 468 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 ASAP1Q9ULH1 1129 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 VANGL2Q9ULK5 521 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 LEMD3Q9Y2U8 911 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 CAMTA1Q9Y6Y1 1673 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 LAMA4Q16363 1823 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 C15orf38-AP3S2A0A0A6YYH1 394 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 MAGEB6P1A0A0J9YX57 407 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 PNMA8CA0A1B0GUJ8 204 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 A0A1W2PRG6 482 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 TLDC2A0PJX2 215 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 H0Y626 953 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 ENC1O14682 589 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 PDPK1O15530 556 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 FOXO3O43524 673 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 EXTL3O43909 919 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 EXOC3O60645 756 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 SKAP2O75563 359 aaPredicted RBP2.5□□□□□ -2.01
RGPD1-204ENST00000559485 SPAG6O75602 509 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 KLHL18O94889 574 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 GJB6O95452 261 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 CRYZL1O95825 349 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 PCCAP05165 728 aaPredicted RBP2.5□□□□□ -2.01
RGPD1-204ENST00000559485 PDGFRBP09619 1106 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 EEF2P13639 858 aaKnown RBP2.5□□□□□ -2.01
RGPD1-204ENST00000559485 CCDC130P13994 396 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 TSHRP16473 764 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 PRKACBP22694 351 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 PRDX6P30041 224 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 IL12RB1P42701 662 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 GSSP48637 474 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 ETV1P50549 477 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 HAND2P61296 217 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 NCALDP61601 193 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 TAGLNQ01995 201 aaKnown RBP2.5□□□□□ -2.01
RGPD1-204ENST00000559485 ALCAMQ13740 583 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 THOC5Q13769 683 aaKnown RBP2.5□□□□□ -2.01
RGPD1-204ENST00000559485 MTFR1Q15390 333 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 ZC2HC1CQ53FD0 456 aaPredicted RBP2.5□□□□□ -2.01
RGPD1-204ENST00000559485 AARS2Q5JTZ9 985 aaKnown RBP2.5□□□□□ -2.01
RGPD1-204ENST00000559485 DEPDC1Q5TB30 811 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 ZNF790Q6PG37 636 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 IZUMO2Q6UXV1 221 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 TPTE2Q6XPS3 522 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 TTC30AQ86WT1 665 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 SNX32Q86XE0 403 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 TMPRSS6Q8IU80 811 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 SAMD14Q8IZD0 417 aaPredicted RBP2.5□□□□□ -2.01
RGPD1-204ENST00000559485 RNASE11Q8TAA1 199 aaKnown RBP2.5□□□□□ -2.01
RGPD1-204ENST00000559485 ENKURQ8TC29 256 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 SYTL5Q8TDW5 730 aaPredicted RBP2.5□□□□□ -2.01
RGPD1-204ENST00000559485 PDCD6IPQ8WUM4 868 aaKnown RBP2.5□□□□□ -2.01
RGPD1-204ENST00000559485 DPF3Q92784 378 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 OTULINQ96BN8 352 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 ZNF570Q96NI8 536 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 TWNKQ96RR1 684 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 MNTQ99583 582 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 LSM14BQ9BX40 385 aaKnown RBP2.5□□□□□ -2.01
RGPD1-204ENST00000559485 BRIP1Q9BX63 1249 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 FRMD8P1Q9BZ68 369 aaPredicted RBP2.5□□□□□ -2.01
RGPD1-204ENST00000559485 UBE2OQ9C0C9 1292 aaKnown RBP2.5□□□□□ -2.01
RGPD1-204ENST00000559485 CLPBQ9H078 707 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 ASCC2Q9H1I8 757 aaPredicted RBP2.5□□□□□ -2.01
RGPD1-204ENST00000559485 UPF3AQ9H1J1 476 aaKnown RBP2.5□□□□□ -2.01
RGPD1-204ENST00000559485 WNT8AQ9H1J5 351 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 TMEM245Q9H330 911 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 PABPC3Q9H361 631 aaKnown RBP2.5□□□□□ -2.01
RGPD1-204ENST00000559485 C12orf10Q9HB07 376 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 SSU72Q9NP77 194 aaKnown RBP2.5□□□□□ -2.01
RGPD1-204ENST00000559485 INTS13Q9NVM9 706 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 ING3Q9NXR8 418 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 DNM3Q9UQ16 869 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 MYRFQ9Y2G1 1151 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 ZBTB1Q9Y2K1 713 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 FAM32AQ9Y421 112 aaKnown RBP2.5□□□□□ -2.01
RGPD1-204ENST00000559485 SLC4A4Q9Y6R1 1079 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 C1orf167Q5SNV9 1468 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 BCL9LQ86UU0 1499 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 SH3PXD2BA1X283 911 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 CFAP69A5D8W1 941 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 C2orf74A8MZ97 194 aa2.5□□□□□ -2.01
RGPD1-204ENST00000559485 NCAM2O15394 837 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms